Taeniopygia guttata (zebra finch): 100038820
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Entry
100038820 CDS
T01082
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100038820 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tgu04040
]
100038820 (TRPV1)
Ion channels [BR:
tgu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100038820 (TRPV1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_3
Ank_5
Ank_4
PKD_channel
Motif
Other DBs
NCBI-GeneID:
100038820
NCBI-ProteinID:
XP_002195940
Ensembl:
ENSTGUG00000006952
UniProt:
H0Z9F8
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Position
19:complement(3160716..3173255)
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AA seq
844 aa
AA seq
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MSSILGKMKKFGSFDMEESEVTDEHTDGEDSVQETSDNPQGPLSSRVQPPKSNIFARRGR
FVMGDSDKDMAPMDSFCQMDHLMAPSVIKFHVNLERGKLHKLLSTDSITGCSEKAFRFYD
RRRIFDAVAQGNTKDLSDLLLYLNRTFKHLTDEEFKEPETGKTCLLKAMLNLHDGKNDTI
PLLLDIARKTGTLKEFVNAEYTDNYYKGQTALHIAIERRNMYLVKLLVQNGADVHARACG
EFFRKIKGKSGFYFGELPLSLAACTNQLCIVKFLLENPYQAANITAEDSMGNMVLHTLVE
IADNTKDNTKFVTKMYNNILILGAKINPILKLEELTNKKGLTPLTLAAKTGKIGIFAYIL
RREIKDPECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEILAYSSETPNRHEMLL
VEPLNRLLQDKWDRFVKHLFYFNFFVYTMHITILTAAAYYRPVQKNEKPPFTFGYSTGEY
FRVTGEILSVLGGLYFFFRGIQYFVQRRPSLRTLIVDGYSEVLFFVHSLLLLSSVVLYFC
GQELYVASMVFSLALGWTNMLYYTRGFQQMGIYSVMIAKMILRDLCRFMFVYLVFLLGFS
TAVVTLIEDDNEGQDTNISDYARCCQVKRGRTSYNSLYYTCLELFKFTIGMGDLEFTENY
RFKSVFVILLVLYVILTYILLLNMLIALMGETVNKIAQESKSIWKLQRAITILDIENSYL
NCLRHSFRSGKQVLVGITPDGQDDYRWCFRVDEVNWSTWNTNLGIINEDPGYSGDLRRNL
SFSIKPGRVSGKNWKTLVPLLKDGEKRREEPHKPPEEVKLKPVLEPYFEPEDSEELKESI
PKSA
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccattcttgggaagatgaagaagtttggcagttttgacatggaggagtctgaa
gtgacagatgaacacacggatggggaggactctgtccaggaaacctctgacaacccccag
ggcccactcagctccagggtgcagcctcccaaaagcaacatttttgcaagacggggccgc
tttgtgatgggggacagtgacaaggacatggctcccatggactccttctgccagatggat
cacctgatggcaccgtctgtcatcaaattccatgtgaatttggagaggggcaagcttcac
aagctcctatctacagattccatcacaggctgctcagaaaaagctttcagattttatgac
cgcagaaggatctttgatgctgtagcccaaggcaacacaaaggacctcagtgacctacta
ctctaccttaatagaaccttcaagcatctcacagatgaggagttcaaagagcctgaaact
ggcaaaacctgtttactgaaagccatgctgaatctgcatgatgggaaaaatgataccatt
cccttgctgctggatattgcaaggaaaactggaactctgaaagagtttgttaatgcagaa
tatactgacaactactacaagggccagactgctcttcacattgccatcgagaggaggaac
atgtacctggtgaagctcctggtccagaatggagcagatgttcatgccagagcctgtggg
gagttcttcaggaaaatcaaagggaaatctggattttattttggagagctgcctttgtcc
ctggctgcctgcaccaaccagctctgcattgtgaaattcctcctggagaatccctaccag
gcagccaacatcactgctgaggactccatgggcaacatggtcctgcacacactggtggag
attgcagataacaccaaggataacaccaagtttgtaaccaagatgtataataacatattg
atccttggtgccaaaattaatcccatcctcaagctggaagaactcaccaacaagaaaggg
ctgactcctttaactctggcagccaaaacagggaagatagggattttcgcttacatcctc
agacgggagatcaaagaccctgagtgcagacacttgtccagaaagttcactgaatgggcc
tatggacctgtccactcctctctttatgacctgtcctgtatagacacctgtgagaaaaac
tcagtgcttgagatccttgcctacagcagtgagacaccaaaccgccacgagatgctgctg
gtggagccccttaacaggctgctgcaagacaagtgggaccgctttgtcaagcacttgttt
tacttcaacttctttgtctacaccatgcacatcaccatcctcactgcagctgcttactac
agacctgtacagaagaatgaaaagcctcccttcacctttggttacagcactggggaatat
tttcgagtaactggagagatcctgagtgtactgggaggcctttatttttttttcagaggg
atccagtattttgtgcagaggcgcccatcactcaggacactgatagtggatggctacagt
gaggttcttttctttgtccactccctgctcctgctgagctctgtggtgctgtacttctgt
ggccaggagctctacgtggcttccatggtgttctccttggccctgggctggaccaacatg
ctctactacacccggggcttccagcagatgggaatttactccgtcatgatcgccaagatg
atccttagagatttgtgtcgcttcatgtttgtctatcttgtattcctcttgggattttct
acagctgtggtgactttgattgaagatgacaacgaggggcaggacacaaatatctctgac
tatgccaggtgctgccaggtgaaacgaggccgcacctcctacaacagcctctactacacc
tgcctggagctcttcaagttcaccattggcatgggggacctggagttcacagagaattac
aggttcaagtctgtgtttgtcatcctgctggtgctctatgtcatcctcacctacatcctc
ctgctcaacatgctcattgcactgatgggggagactgtcaacaaaattgcacaggagagc
aagagcatctggaaactccagagagccatcacaatcctggacattgagaacagctacttg
aactgtctgaggcactccttccgctctgggaagcaagtcctggtggggatcacacctgat
ggccaagatgattacaggtggtgcttcagggttgatgaagtgaactggtccacgtggaac
actaatctgggcatcatcaatgaagaccctgggtactctggggacctcagacgaaatctc
agtttctccattaagcctggcagagtttcaggaaagaactggaaaacattggttccactt
ctaaaagatggagagaagaggagagaagagcctcacaagccaccagaagaagtcaaatta
aaacctgttttggaaccttattttgagccagaagattctgaggaattgaaagagtcaatt
ccaaagtcagcctaa
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