KEGG   Taeniopygia guttata (zebra finch): 100190224
Entry
100190224         CDS       T01082                                 
Symbol
POLR2D
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu03020  RNA polymerase
tgu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100190224 (POLR2D)
  09124 Replication and repair
   03420 Nucleotide excision repair
    100190224 (POLR2D)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tgu03021]
    100190224 (POLR2D)
   03400 DNA repair and recombination proteins [BR:tgu03400]
    100190224 (POLR2D)
Transcription machinery [BR:tgu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     100190224 (POLR2D)
DNA repair and recombination proteins [BR:tgu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100190224 (POLR2D)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4 Maelstrom
Other DBs
NCBI-GeneID: 100190224
NCBI-ProteinID: NP_001232096
Ensembl: ENSTGUG00000005773
UniProt: B5FZ31
LinkDB
Position
9:3757686..3761737
AA seq 142 aa
MAAGGSDPRTADVEEDASQLVFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEEAKALIPSLEG
RFEDEELQQILDDIQTKRSFQY
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcggcgggaggcagcgacccgcggacggcagacgtggaggaggacgcctcgcagctc
gtcttccccaaagaatttgaaactgcggaaactctgctgaactccgaggtgcacatgctg
ctggagcaccgcaagcagcagaacgagagcgcggaggatgagcaggagctgtcagaagtc
ttcatgaaaactctgaactacacagcacgcttcagccgcttcaaaaaccgcgaaaccatc
gccagcgtgcgcagcttactgctgcagaagaagctccataagtttgaactggcatgtttg
gctaacttgtgtcctgagacagctgaggaagcaaaagctctgattcctagcctggagggc
cggtttgaagatgaagaattacaacagattctcgacgacattcagactaaacgcagcttc
cagtattaa

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