Taeniopygia guttata (zebra finch): 100190259
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Entry
100190259 CDS
T01082
Symbol
RBM8A
Name
(RefSeq) RNA-binding protein 8A
KO
K12876
RNA-binding protein 8A
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03013
Nucleocytoplasmic transport
tgu03015
mRNA surveillance pathway
tgu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100190259 (RBM8A)
09122 Translation
03013 Nucleocytoplasmic transport
100190259 (RBM8A)
03015 mRNA surveillance pathway
100190259 (RBM8A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgu03019
]
100190259 (RBM8A)
03041 Spliceosome [BR:
tgu03041
]
100190259 (RBM8A)
Messenger RNA biogenesis [BR:
tgu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100190259 (RBM8A)
Spliceosome [BR:
tgu03041
]
Complex C
Other components
EJC/TREX
100190259 (RBM8A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
100190259
NCBI-ProteinID:
NP_001232210
Ensembl:
ENSTGUG00000004447
UniProt:
B5FZD1
LinkDB
All DBs
Position
25:1766643..1769928
Genome browser
AA seq
174 aa
AA seq
DB search
MADVLDLHEAGGEDFAMDEDGDESIHKLKEKAKKRKGRGFGSEEGSRARVREDYDSVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDVHDRFAEFGEIKNIHLNLDRRTGYLKGYTLVE
YETYKEAQAAMAGLNGQELMGQPVSVDWCFVRGPPKGKRRGGRRRSRSPDRRRR
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtgctggaccttcatgaggcgggcggggaggatttcgccatggacgaggat
ggcgacgagagcatccacaagctgaaggagaaagccaagaagcgcaagggccgcggcttc
ggctcagaggaaggctcccgcgctcgggtgcgcgaggattacgacagcgtggagcaggac
ggggacgagccggggccacagagatccgtggagggctggatcctgtttgtgacaggggtg
cacgaggaggccacggaggaggacgtgcacgatagatttgctgaatttggggagatcaaa
aacatccacctgaacctggaccggcgcacgggatacctcaagggctacacgctggtggag
tacgagacctacaaggaggcgcaggcggccatggcggggctcaatgggcaggagctgatg
gggcagccggtcagcgtggactggtgcttcgtcaggggcccccccaagggcaagaggagg
ggtgggcgccggcggagccgcagtccagaccggcgccgccgatga
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