KEGG   Taeniopygia guttata (zebra finch): 100190259
Entry
100190259         CDS       T01082                                 
Symbol
RBM8A
Name
(RefSeq) RNA-binding protein 8A
  KO
K12876  RNA-binding protein 8A
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu03013  Nucleocytoplasmic transport
tgu03015  mRNA surveillance pathway
tgu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100190259 (RBM8A)
  09122 Translation
   03013 Nucleocytoplasmic transport
    100190259 (RBM8A)
   03015 mRNA surveillance pathway
    100190259 (RBM8A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tgu03019]
    100190259 (RBM8A)
   03041 Spliceosome [BR:tgu03041]
    100190259 (RBM8A)
Messenger RNA biogenesis [BR:tgu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     100190259 (RBM8A)
Spliceosome [BR:tgu03041]
 Complex C
  Other components
   EJC/TREX
    100190259 (RBM8A)
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5 Nup35_RRM_2
Other DBs
NCBI-GeneID: 100190259
NCBI-ProteinID: NP_001232210
Ensembl: ENSTGUG00000004447
UniProt: B5FZD1
LinkDB
Position
25:1766643..1769928
AA seq 174 aa
MADVLDLHEAGGEDFAMDEDGDESIHKLKEKAKKRKGRGFGSEEGSRARVREDYDSVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDVHDRFAEFGEIKNIHLNLDRRTGYLKGYTLVE
YETYKEAQAAMAGLNGQELMGQPVSVDWCFVRGPPKGKRRGGRRRSRSPDRRRR
NT seq 525 nt   +upstreamnt  +downstreamnt
atggcggacgtgctggaccttcatgaggcgggcggggaggatttcgccatggacgaggat
ggcgacgagagcatccacaagctgaaggagaaagccaagaagcgcaagggccgcggcttc
ggctcagaggaaggctcccgcgctcgggtgcgcgaggattacgacagcgtggagcaggac
ggggacgagccggggccacagagatccgtggagggctggatcctgtttgtgacaggggtg
cacgaggaggccacggaggaggacgtgcacgatagatttgctgaatttggggagatcaaa
aacatccacctgaacctggaccggcgcacgggatacctcaagggctacacgctggtggag
tacgagacctacaaggaggcgcaggcggccatggcggggctcaatgggcaggagctgatg
gggcagccggtcagcgtggactggtgcttcgtcaggggcccccccaagggcaagaggagg
ggtgggcgccggcggagccgcagtccagaccggcgccgccgatga

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