Taeniopygia guttata (zebra finch): 100190604
Help
Entry
100190604 CDS
T01082
Symbol
LSM4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03018
RNA degradation
tgu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100190604 (LSM4)
09123 Folding, sorting and degradation
03018 RNA degradation
100190604 (LSM4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgu03019
]
100190604 (LSM4)
03041 Spliceosome [BR:
tgu03041
]
100190604 (LSM4)
Messenger RNA biogenesis [BR:
tgu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100190604 (LSM4)
mRNA degradation factors
5'-3' decay
Lsm complex
100190604 (LSM4)
Spliceosome [BR:
tgu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
100190604 (LSM4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
100190604
NCBI-ProteinID:
NP_001232447
Ensembl:
ENSTGUG00000001027
UniProt:
A0ACM8QHD4
B5KFU9
LinkDB
All DBs
Position
28:3463030..3468921
Genome browser
AA seq
138 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVSKGRGRGGMQQQKQQKGRGVGGAGRGVFGGRGRGIP
GSGRGQQEKKPGRQSAKQ
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccctgtccttactgaagacggcgcagaaccaccccatgctggtggagctgaag
aacggggagacgtacaacgggcacctggtgagctgcgacaactggatgaacatcaacctg
cgggaggtcatctgcacatcacgggacggggacaagttctggaggatgccagagtgctac
atccgtggcagcaccatcaaatacctgcggatccccgacgaaatcatcgacatggtgaag
gaggaggtggtgtccaagggcagaggccgtggtgggatgcagcagcagaagcagcagaag
ggtcgtggggttggaggagctggacgaggtgtttttggtggccgtggccgaggaattccg
ggcagtggaagaggccagcaggagaaaaagccaggcaggcaatcagccaagcagtga
DBGET
integrated database retrieval system
