KEGG   Taeniopygia guttata (zebra finch): 100191006
Entry
100191006         CDS       T01082                                 
Symbol
FMR1
Name
(RefSeq) synaptic functional regulator FMR1
  KO
K15516  fragile X mental retardation protein
Organism
tgu  Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tgu03019]
    100191006 (FMR1)
Messenger RNA biogenesis [BR:tgu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     100191006 (FMR1)
   Factors involved in mRNA localization
    Other mRNA localization factors
     100191006 (FMR1)
   mRNA cycle factors
    Stress granule specific factors
     100191006 (FMR1)
SSDB
Motif
Pfam: FXMRP1_C_core KH_9 Tudor_FRX1 KH_1 FXMR_C2 Agenet KH_2 KH-I_KHDC4-BBP pAdhesive_11 KIF2A-like_1st
Other DBs
NCBI-GeneID: 100191006
NCBI-ProteinID: NP_001129591
Ensembl: ENSTGUG00000004735
UniProt: B6CVD8
LinkDB
Position
4A:complement(13115157..13146836)
AA seq 548 aa
MEELVVEVRGSNGAFYKAFVKDVHEDSITVSFENNWQPERQIPFHDVRFPPPAGYNKDIN
ESDEVEVYSRANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYNEIVTIERLRSVNPNKP
ATKDTFHKIKLAVPEDLRQMCAKESAHKDFKKAVGAFSVTYDSENHQLIILSINDVTTKR
ANMLIDMHFRSLRTKLSLILRNEEASKQLESSRQLASRFHEQFVVREDLMGLAIGTHGAN
IQQARKVPGVTAIDLDEDTCTFHIYGEDQDAVKKARSYLEFAEDVIQVPRNLVGKVIGKN
GKLIQEIVDKSGVVRVRIEAENDKNIPQEEGMVPFVFVGTKDSITNATVLLDYHLNYLKE
VDQLRLERLQIDEQLRQIGATSRPPPNRTDKDKGYMTDDGPGLGRGSRPYRNRGHSRRGP
GYASGTNSEASNASETESDHRDELSDWSAAPAEEERDNYLRRGDGRRRGGGGRGQGGRGR
GGFKGNDEQSRTDNRQRNSREAKGRTADGSLENTSSEGSRLRAGKERNPKKEKTDGADAQ
QPLVNGVP
NT seq 1647 nt   +upstreamnt  +downstreamnt
atggaggagctggtggtggaggtgcggggctccaacggggccttctacaaggcatttgta
aaggatgtgcatgaagattcaataacagtttcatttgaaaacaactggcaaccagagaga
caaatcccattccatgatgtgaggttcccaccacctgcaggctataataaagacataaat
gaaagcgatgaagtagaggtttattccagagcaaatgaaaaagaaccctgctgttggtgg
ttggctaaagtgagaatgataaagggtgagttctacgtaatagaatatgcagcctgtgat
gctacatacaacgaaattgtcacaattgagcgtttgagatctgtgaaccccaataaaccc
gcaacaaaagatacttttcataaaatcaaactggcagtccctgaagatttaaggcaaatg
tgtgccaaagaatctgcacataaggacttcaaaaaggcagttggagctttttctgtaaca
tatgattctgaaaaccaccagcttattattttgtcaatcaacgatgtaaccacaaagcgg
gccaacatgctgattgatatgcactttcggagtcttcgcaccaagttatccctgattctg
agaaatgaagaagccagcaaacagctggagagttctaggcaacttgcatcccggttccat
gaacagtttgtagtacgtgaagacttaatgggtttggccattggcactcatggtgctaat
attcagcaagccagaaaagtccctggagtgactgctattgatcttgatgaagatacttgt
acattccatatttatggagaggatcaagatgcagtgaaaaaggcaagaagttaccttgaa
tttgctgaagatgtcatacaagtcccaaggaatttagtaggaaaagtaataggaaaaaac
ggaaaactgattcaggagatagtggacaaatctggcgttgtaagagtgagaatcgaggct
gaaaatgataaaaatattccacaagaagagggcatggtaccatttgtgtttgtaggaacc
aaggatagcatcactaatgcaactgttcttctggattatcatcttaattatttaaaggaa
gtggaccagctgcgtttggaaagattgcaaattgatgagcaactgcggcagatcggagct
acttccaggccccccccgaaccgcacagacaaggacaaagggtacatgacggacgacggg
ccgggccttggccgcggcagccgcccctacagaaaccgcgggcacagccggcgtgggccg
ggctatgcttcgggaactaattctgaagcatcaaatgcttctgaaacagagtctgatcac
agagacgagctgagcgattggtcggcggccccggcggaggaggagcgggacaattacctg
cgcaggggggacgggcggaggcgcggcggcggcggcagaggccaaggcgggagggggcgc
ggaggattcaaaggcaatgatgaacagtcacgaacagataaccgtcagcgtaactcaaga
gaggcgaaagggaggacagcagacgggtctcttgagaatacctcgagcgaaggcagccgg
ctgcgcgcgggcaaggagcggaaccccaagaaggagaagacggacggcgccgacgctcaa
cagccgctggtgaacggagtcccctaa

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