Taeniopygia guttata (zebra finch): 100217540
Help
Entry
100217540 CDS
T01082
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X2
KO
K14308
nuclear pore complex protein Nup54
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100217540 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgu03019
]
100217540 (NUP54)
Messenger RNA biogenesis [BR:
tgu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100217540 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
100217540
NCBI-ProteinID:
XP_030128047
Ensembl:
ENSTGUG00000001685
UniProt:
A0A674G8P9
LinkDB
All DBs
Position
4:67049937..67061865
Genome browser
AA seq
558 aa
AA seq
DB search
MAFNFSATAGAGAANPTGFGGLETANSTASGFNFGGFGLTANPAVNFNIGNFGVSTTSTP
PFNFGNSLASAGAFGGFGTTTTTAAPAFSFSAPTNTGTSGLFGATQNKGFGFGTSFGTGT
GTGLGSGLGTGLGFGGFGTQQQQQQQQTTLGTGLFNQPAQTPAQSNQLINTASALSAPTL
LGDERDAILAKWNQLQAFWGTGKGYFNNNIAPVEFTQENPFCRFKAVGYSLMPNNKDEDG
LVVLVFNRKEADIRSQQQQLVESLHKILGGNQTLTVNVEGVKTMPDDQTEVIIYIVERSP
NGTSRRVPATTLYAHFEQANIKSSLQQLGVSLSMARTELSPAQVKQLLQNPPAGVDPIIW
EQAKVDNPDPDKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISELQKNQTTTM
AKIAQYKRKLMALSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCELNAPTQFKG
RLNELMSQIRMQNHFGAVRAEERYYIDADLLREIKQHLKQQQEGLSHLISIIKDDLEDIK
LIEHGLNESIPIRGGAFS
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaacttcagcgccacggcgggagccggggccgccaacccgaccggatttggt
gggcttgaaactgcaaactccactgccagtgggtttaattttgggggtttcggattaact
gctaatcccgcggtgaattttaatattgggaatttcggtgtttccactacctcaactcca
cctttcaattttggtaacagtctggcgagcgcaggtgccttcggaggctttgggaccacc
accaccaccgcggcaccggcgttcagcttctctgctcccaccaacaccggcaccagcgga
ctctttggtgctacccagaacaaaggctttggatttggtaccagttttggcacaggaact
ggaactggcttgggcagtgggttgggaactgggctaggctttggaggctttggaactcag
cagcagcagcagcagcagcagaccacattaggcaccgggttgttcaaccagcctgcccag
acacccgctcagtccaaccagctcatcaacacagccagcgccctctcggccccgacactg
ctgggagatgagagggacgccattctggccaaatggaaccagctccaggccttctggggc
acgggcaaagggtacttcaacaacaacatcgctccggtggagttcacgcaggaaaacccc
ttctgccggtttaaggctgtgggctacagtttaatgccaaacaacaaagatgaagatggc
ctcgtggtcttggtgtttaacagaaaagaagcagatattcgaagccagcagcagcagctc
gtagaatcactacataaaattttgggaggaaaccagaccctcactgtcaatgtcgaaggt
gttaaaacgatgcccgatgaccagacagaagtgatcatttacattgtggagcgctcgccc
aacggcacctcgaggagagttcctgcaacgaccctgtacgcccactttgagcaagccaac
atcaaatcatccctgcagcagctcggggtcagcctgtccatggccaggacagagctgtcc
ccggcacaagtcaagcagctcctgcagaaccctcctgccggtgttgatccaattatatgg
gaacaagccaaagttgataatcctgatcctgataagcttattcctgtaccaatggtgggt
ttcaaggaactgctgagaagattgaaggtccaggatcagatgaccaaacagcatcaaact
cgattagatataatatcagaagatatcagtgagctgcagaaaaaccaaacgacaactatg
gcaaaaattgcacagtacaaaaggaaactgatggcgctttcacacagaactttgcaggtg
ctaataaagcaggagatccaaaggaaaagtggctatgctattcaagcagatgaggagcag
cttcgtgtacagttggatacaattcagtgtgaacttaatgcacccacgcagttcaagggt
aggctgaatgagctcatgtctcagatcaggatgcagaaccactttggagcagtgcgggct
gaagagcgctattacatagatgcagacctcttaagggaaatcaagcaacacctgaagcag
cagcaagaagggctgagtcacctaatcagcatcatcaaggatgatttggaggacatcaag
ctaatagaacacgggctgaatgagagcattcccatccgagggggagccttcagttga
DBGET
integrated database retrieval system
