Taeniopygia guttata (zebra finch): 100217567
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Entry
100217567 CDS
T01082
Symbol
FDFT1
Name
(RefSeq) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu00100
Steroid biosynthesis
tgu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
100217567 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
tgu01006
]
100217567 (FDFT1)
Enzymes [BR:
tgu01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
100217567 (FDFT1)
Prenyltransferases [BR:
tgu01006
]
Terpene biosynthesis
Squalene/phytoene synthase
100217567 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
HAUS4
SCC3_C
Motif
Other DBs
NCBI-GeneID:
100217567
NCBI-ProteinID:
XP_002186800
Ensembl:
ENSTGUG00000013293
UniProt:
A0A674HU74
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All DBs
Position
3:1604106..1615588
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AA seq
418 aa
AA seq
DB search
MELLRKWLGHPEDIYNLLRFKMGGYRAVMPRMDTDSLGCGLRTCYRYLNQTSRSFAAVIQ
ALDGELRHAVCIFYLVLRALDTVEDDMSIPLDVKVPMLHEFHSYLYQPDWKYTESKEKDR
QVLEDFPTISMEFRNLSKVYQDVISDICHKMGVGMAEFLEKKVDSEREWDKYCHYVAGLV
GIGLSRLFSASELEDSIVGQDTDLANSMGLFLQKTNIIRDYLEDQLEGREFWPREVWSRY
AKKLSDFAKPENIDMAVQCLNELITNALHHVPDVLTYLSRLKNQSVFNFCAIPQVMAIAT
LAACYNNQQVFRGVVKIRKGQAVTLMMDATNIQAVKAIVYQYVEEIYQKIPSTDPSSNKT
QQVVASIRAVSLPGSPMASRHHYSPIYLSCAMLLAALSWQYLSTLSKATEEYVQAGDN
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggagctgctgcggaaatggctgggccaccccgaggacatctacaacctgctgcgcttc
aagatgggcggctaccgcgccgtcatgccgcggatggacacggactcgctgggatgtggc
ctccgcacctgctaccgctacctcaaccagaccagccgcagcttcgccgccgtcattcag
gcgctggatggagagctgagacatgcagtctgtatattctacctagttctccgtgccctg
gacactgtagaggatgacatgagcatccctttggatgtcaaggtcccgatgctgcacgag
ttccactcctatctctaccagccagactggaagtacacagagagcaaggagaaggacagg
caggtgctggaagacttcccaacgatctccatggagttcagaaacctgtccaaggtctac
caggatgtgatttcggatatttgtcacaagatgggcgttgggatggcagagttcttggag
aaaaaggtggattctgagcgtgagtgggataagtattgtcactacgttgctgggctggtg
gggattggcctttcccgtctcttctctgcatcagagctggaagattctatcgtggggcag
gacacagatctggcaaactccatgggcctcttcctacagaaaaccaacatcatccgtgac
tatctggaggaccagctggagggaagggagttctggcccagagaggtttggagcagatat
gccaagaagctctcagactttgccaagccggagaacatcgacatggccgtgcagtgcctc
aatgagctcatcaccaacgccctccaccacgtccctgacgtcctcacctacctgtcccgc
ctcaaaaaccaaagtgtcttcaacttctgcgctatcccccaggtgatggccattgccacg
ctggctgcctgctacaacaaccagcaagtgttcaggggggtggtgaagatccgcaagggc
caggccgtcaccctcatgatggatgccacgaacatccaagctgtcaaagccatcgtgtac
cagtatgtggaagagatctaccagaagatcccgagcacggacccctcgtccaacaagacg
cagcaggtcgtcgcctccatccgcgccgtcagcctgcccggcagccccatggcctcccgc
caccactactcccccatctacctgtcctgtgccatgctcctggcagccctgagctggcag
tacctcagcaccctctccaaggccaccgaggagtacgtgcaggcaggagacaactga
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