Taeniopygia guttata (zebra finch): 100217681
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Entry
100217681 CDS
T01082
Symbol
TNRC6B
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgu03019
]
100217681 (TNRC6B)
03036 Chromosome and associated proteins [BR:
tgu03036
]
100217681 (TNRC6B)
Messenger RNA biogenesis [BR:
tgu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100217681 (TNRC6B)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
100217681 (TNRC6B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
100217681
NCBI-ProteinID:
XP_030118806
LinkDB
All DBs
Position
1A:complement(48008213..48139486)
Genome browser
AA seq
1865 aa
AA seq
DB search
MQTDEGEILEEGSPKVSEMEHEDFVMEGHGKTPPPGEENKQEKEQEREEQLMEDKKRKKE
DKKKKDSAQKVTDQKTKVPEVTKPSLSQPVAASPIGNSPSPPVNGGNNAKRVAVPNGQPP
SAARYMPREVPPRFRCQQDHKVLLKRGQPPPPSCMLLGGGAGPPSPAAPGANPSNAQPVT
GALLQSDSGTATDSAIGGAAASNYANSTWGPGASSNSGTNANPTHIWDKVIVDGSDMEEW
PCIASKDAESSSENTTDNNSASNPGLEKNALPGSTTSNKGKGSQCQSGSAGNECNLGAWK
SDPKAKSVQSSNPAAENNNGLGNWRNLSGQDRISPGSGFSNFNPNSNPSAWPALVQEGNS
RKGTLESDSGSSNAQISTVGQTSREQQSKMENAGVNFVSGREQAQIHNTDGPKNGNTNSL
NLSSPNPTENKGMPFEMGLGNPSRSTDTPSQSTGERKTGSVGSWGTARGSSGTETVSGQS
NSGNHGNNGKDREDSWKGASLQKSNGSRSDSWDNNNRSTGGGSWNFGPQHANESKWGEGN
KLTSGVSQGEWKQLSGSDELKIGEWSGPNQPNSSTGAWDNQKGHPLPENQGNSQAPCWGR
SSSSAGSEVGGQSTGSNHKAGSSDSHNSGRRSYRPTHPDCQAVLQTLLSRTDLDPRVLSN
TGWGQTQIKQDTVWDIEEMPRPEGKSDKGTEGWESSATQTKNSGGWGDVPSQSNQNKSGW
GELSTPAEWKDPKNTGGWNDYKNSNSSNWGGGRQEEKSSSSWNDSSSKDQGWGGRQSNQG
WPSGKNGWGEEVDQTKNSNWESAGNKPVSGWGEGGQNEIGTWGNGANTSSASKGGWDDCK
RTSTWNETGRQPNSWNKQQQQHQQQQQESSGSWGPPPQTPSNGRPPNPNWNNGPQPAAPK
EEEPSGWEEPSPQSISRKMDIDDGTSAWGDPSSYNYKNVNLWDKNSQGGQAPREQSLPTP
MTSKSQASVWSKSTPPAPDNGTSAWGEPNETSPGWGEVDDTGASTTGWGNAPSNAPNAMK
SSSKSMQDGWGESDGPVTGTRHSSWEEEEEGGVWNTAGSQGSSSSHNSTSWGQGGKKTQM
KCALKGGNSDSWMNPLSKQFSNMGLLSQTDDIPGSKMDLSVGGLPDKKFEVDKRAVNLGD
FNDMMRKDRSGFRPPNSKDMGTTDSGPYFEKLTLPFSNQDGCLGDEAPCSPFSPSPSYKL
SPSGSTLSNVGLGAIGSGLSPQNFAARQGGNHGLFGNSTAQSRGMHTPVQPLNPSPNIRA
QVPPQFLSPQVSASMLKQFPNSGLNPGLFNMGPQLSPQQIAMLSQLPQIPQFQLACQLLL
QQQQQQQLLQSQRKLSQAVRQQQEQQIARMVSALQQQQQRQPGMKHSPSHPVGPKPHLDS
MVPNPLNVGLSDLQTKGQIPGYSSGGFGSSGMDYGMVGGKEAGTESRFKQWTMMEGLPSV
ASQDANMHKNGAIVPPGKARGGSPYNQFDIIQGDPLSSHTGPAGDSWLPAKSPPTNKIGS
KSSNASWPPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTATSPIVDTDHQLLRDNTTGS
NSSLNTSLPSPGAWPYSASDNSFTNVHSTSAKFSDYKSTWSPDPIGHNPTHLSNKMWKNH
ISSRNTTGLPRPPPGLTNPKPSSPWNSTAPRSVRGWGAQDSRLGSASTWSDGGSVRPSYW
LVLHNLTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYNTKQEAAKAQTALHMCVLG
NTTILAEFATDEEVSRFLAQAQPPTPAATPSAPAAGWQSLETGQNQTDPVGPALNLFGGS
TGLGQWSSGGGGGSSGGDLTGASLWGPPNYSSSLWGVPSVEDPHRMGSPAPLLPGDLLGG
GSDSI
NT seq
5598 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactgatgagggagaaatactggaggaaggcagtcccaaggtcagtgagatggaa
catgaggattttgtaatggaggggcatggcaagactccacctcctggtgaagaaaacaaa
caagagaaggagcaagaaagggaagaacagttaatggaagacaagaaaaggaagaaagag
gataagaaaaagaaggactctgctcagaaggtcacagatcaaaaaaccaaagtgcccgaa
gtgacgaaaccaagtttaagccaaccagtggctgccagcccaattggcaactctccatcg
ccaccagtcaatggtggcaacaatgccaaaagggtggcagtgccgaacggacaaccgcca
agcgccgcccgctacatgcctcgggaggtgccgccgcgattccgttgccagcaggaccac
aaagtgttactgaaacgtgggcagccccctccgccatcctgcatgctccttgggggtgga
gcagggcctccctccccagcagcaccaggagcaaaccccagcaacgcacaaccagtgaca
ggagcactgctgcagagcgacagtgggactgcaacagattcagcaattggaggtgctgct
gcttcaaattatgcaaattccacttggggtcctggagcctcctccaacagcggcaccaac
gccaacccaactcacatctgggacaaggtgattgtagacgggtctgacatggaagagtgg
ccttgtattgccagcaaagatgctgagtcttcttccgaaaacaccaccgataacaacagt
gcctcgaaccctggcttggagaagaacgctctgccaggaagcaccactagtaacaaagga
aaaggaagccagtgccagtctggaagcgctggaaacgaatgtaatcttggggcctggaaa
tctgatcccaaggctaaatctgttcaatcttccaaccctgctgccgagaataacaatgga
ctaggtaattggaggaacttgagtggacaagacagaatcagtcccggttctggtttcagc
aactttaacccaaatagcaacccatctgcttggccagcactggttcaagagggcaattct
aggaaaggaactctggaatctgatagtggtagctccaatgcacagattagcacagtaggt
cagacctctagggaacagcagtcaaagatggaaaatgcgggtgttaactttgtctctggc
agagaacaggctcaaattcataacactgatggaccaaaaaatggaaacactaactccttg
aacttaagttcaccaaaccctacggagaataagggaatgccctttgaaatgggcttgggg
aacccttccaggagcactgacaccccttctcaaagcactggagaaagaaaaactgggagt
gttggatcttggggtacagctagggggtcttctggaactgaaacagtctctgggcagagc
aattctggaaaccatgggaacaatggaaaggatagagaggactcctggaaaggagcttct
cttcaaaaatctaatgggtcaagaagtgattcctgggataacaataaccggtctacgggt
ggtgggtcttggaactttggccctcagcatgcaaatgaaagcaaatggggtgaagggaac
aaattaacatctggggtgtctcagggagaatggaaacagctgtctgggtctgatgaactg
aagattggagagtggagtggtccaaaccaaccaaattctagcactggagcatgggacaat
caaaaaggccaccctcttcctgaaaaccaaggcaattcccaggctccctgttggggaaga
tcttccagctctgcgggaagtgaggttggaggtcaaagcactggaagcaaccacaaagca
ggaagtagtgacagtcacaattctggacgccgatcatacaggcctacgcatcctgattgc
caggcagtcctgcagactttgctgagcaggactgacttggacccccgagtgctttcaaac
accggctggggccagactcaaattaagcaagataccgtgtgggatattgaagagatgcca
cgacccgaggggaagtctgataaaggaactgaggggtgggagagctctgccacacagaca
aagaactcagggggctggggcgatgtacccagccaaagcaatcaaaacaagtctggatgg
ggtgagctctcaaccccagcggagtggaaggaccccaaaaatactggaggatggaatgac
tataagaactccaattcttctaattggggaggaggaaggcaagaagaaaaatcatcttcc
tcttggaatgacagctctagtaaggatcaggggtggggtggacggcaaagtaatcaagga
tggccttctggaaagaacggttggggagaggaagttgaccaaacaaaaaacagtaactgg
gaaagtgcaggaaacaagccagtgtctggttggggtgaaggtgggcagaatgagattgga
acttggggtaatggtgcaaatacaagctctgcttcaaagggtggatgggatgattgtaaa
agaacttcaacgtggaacgagacgggtcgacagcccaactcctggaacaagcagcagcaa
cagcaccagcagcaacagcaggagtcttctggttcctggggtccaccaccccaaactcca
agtaatgggcggcctccaaacccaaactggaacaacggaccacagccagctgcccccaaa
gaggaggagcctagtggctgggaagaaccttctccacagtcaatcagtcgaaaaatggat
attgatgatggcacttcagcgtggggagatcctagcagttataactacaagaatgtgaat
ctgtgggacaagaactctcaaggaggacaggccccacgggagcagagcctgcctactccg
atgactagcaaatcacaagcatcagtctggagcaaaagcactccacctgctccagataat
ggtacgtccgcctggggtgagccaaatgaaaccagtcccgggtggggtgaagtagatgat
acaggagcatcgactacaggctgggggaatgcaccttccaacgccccaaatgccatgaaa
tctagttctaaatctatgcaagatggctggggagagagtgatgggccagtaacaggaaca
cgtcattccagctgggaagaggaggaggagggaggagtctggaacacagcaggctctcag
ggaagcagttcctcccacaactcaacaagctggggacaaggaggaaagaaaacacaaatg
aagtgcgcattaaaaggaggaaatagtgattcgtggatgaaccctttatccaaacagttt
tcaaatatgggcttgctaagtcaaactgatgacattccaggcagtaagatggacttgtct
gtaggtggtctcccagataagaagtttgaggtagataaacgagctgtgaatctcggggat
tttaatgacatgatgaggaaggatcgatctgggttccgtccacctaattccaaagacatg
ggaaccacagatagtgggccttattttgagaagctgactttgcctttctccaatcaagat
gggtgccttggggatgaggctccctgctctcccttctccccttctcccagctacaagctg
tctccctctggttccacactatccaacgtcggccttggggcaatcggctcagggctcagt
ccccaaaacttcgctgctagacaaggtggcaatcatggtttgtttggaaacagcacagca
caatcgaggggcatgcacacaccagtgcagccactaaatccttcccccaatatccgggcg
caagtgcctccccaattcctttctccccaggtttcggcctccatgctcaaacagtttccc
aacagtggcttgaatcctggtctcttcaatatgggcccccagctttctccgcaacagatt
gccatgctgagccagcttccacagattccccagttccaattagcttgtcagctcctcctt
cagcagcagcagcagcaacagctgttacagagccagagaaagttatctcaagctgtgagg
caacagcaggagcaacagattgctcgtatggtgagtgccctccagcagcagcagcagagg
cagcctggcatgaagcattcgccatcccaccctgttgggcctaagccacatttagacagc
atggtacccaatcctttgaatgtgggtctctcagatttacagaccaaagggcagatacct
ggatacagttcaggtggctttggctcaagtggcatggattatggcatggtgggagggaag
gaggctggaacagaatcccgctttaagcagtggactatgatggaagggctgccctctgtg
gcttcacaagatgccaatatgcacaaaaatggtgcaatagtgccccctggaaaggctcgc
ggaggatcgccctacaaccagtttgacataatccagggcgacccgctcagcagccataca
ggccctgctggtgatagttggttacctgccaaatctccaccaacaaacaagatcggaagt
aaatccagcaatgccagctggcctccagagttccaaccaggagtgccatggaaaggtata
caaaacattgaccctgaatctgacccctatgtgacccctggaagtgtgctgggggggaca
gccacatctcccattgtagatactgaccaccaacttctgcgggacaacaccacagggtcg
aattcttccctcaacacctcgctgccttcacctggtgcctggccctacagtgcctctgac
aattccttcaccaacgttcatagcacttcagcaaaattcagtgattacaaatcaacatgg
tccccagatcccataggacacaatcccactcatctctccaacaagatgtggaaaaaccat
atttcctcaaggaacactacagggctgccccgcccacctcctggcctgaccaaccccaaa
ccatcatctccatggaacagcacagcaccccgatcggtcaggggctggggggcacaggac
tcaaggcttggttctgcatctacttggagtgatggtggctcagttcgtcctagctactgg
ctggttcttcacaatctcactccacagattgatgggtcaaccttgaggacgatctgcatg
cagcatggcccactgctgacattccatctgaacctgacccagggcaccgccctcatccga
tacaacaccaaacaggaggcggccaaggcccaaactgcactgcacatgtgtgtgttggga
aacactaccatcctggctgagtttgccacagacgaagaggttagtcgctttttggcacaa
gctcagccccctacacctgcagcaaccccaagtgcacccgcagcgggctggcaatccctg
gagacaggacagaaccagacagatccagttggacctgctttgaatctctttggtgggtca
acagggcttgggcagtggagcagtggtggcggcggcggcagcagtgggggtgatctcact
ggcgcttcattgtgggggcccccaaactattcttcaagcttgtggggggtcccaagcgta
gaggatccacaccgaatgggcagtcctgctcccttactacctggagaccttctgggagga
gggtcggattcaatctga
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integrated database retrieval system
