Entry |
|
Symbol |
DIS3L
|
Name |
(RefSeq) DIS3-like exonuclease 1
|
KO |
K18681 | DIS3-like exonuclease 1 [EC:3.1.13.-] |
|
Organism |
tgu Taeniopygia guttata (zebra finch)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:tgu00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100217759 (DIS3L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:tgu03019]
100217759 (DIS3L)
Messenger RNA biogenesis [BR:tgu03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
100217759 (DIS3L)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
10:18525044..18540160
|
AA seq |
1056 aa
MLRTEKVLQLRGQHGRAVRVVREHYLRPDVPCRSALCRSAQCRAACARDGKLLSDDVTHY
VVPDCKVVQEYLEILEFPELKGIIFMQTACQAVQHQKGRRQYNKLRNLLKDPRHDCTVFA
NEFHQHCYLPREKGESMEKWQTRNIYNAAAWYHNHCLGQMPVVMVTEDEDAIRQYGNETE
GVFVISFKNYLDNFWPDLKAAHELFGSIVQARRERESESQENHGKEYPEHLPVEVLEAGI
KSGRYLQGALNVNKHRAQLEAFVRLQGIGSKDTELQSDILIYGAKARNRAIHGDVVVVEL
LPVHEWKGRTVALCENETEEKAPADTTGDPMPTGKVVGIIQKNWRDYVVTFPSKEESQSQ
GRNAQKVLVTPWDYRIPKIRISTQQAEALQEYRVVVRIDSWESTSLYPNGHFVRVLGRIG
DLEGEIAAILVENSICAAPFSEIQMSEMPASSPKNPWKVSPEEEKKRLDLRDNHLIFSID
PKGCEDVDDALSVRTLPNGNLELGVHIADVTHFVAANSYTDVEARARATTYYLADRRYDM
LPSVLSADLCSLLSGVDRYAVSVLWELEKESYEMLSVQYTRSLIRSAYKLEYETAQGLLD
GDTSVVGDILELKSLDEGTRQKKLAELVWAVSKLTDIARHVRAERDRCGALELEGIEIRV
QLDDKRNIHDLIPKQPLEVHETVAECMILANHWVAKRIAEAFPHQALLRQHPPPRQEFFT
ELRDCASAKGFSIDTRSNKALAESLDRANDPSDPIVNKLLRSMATHAMSNALYFSTGSCP
EEQFHHYGLALEKYTHFTSPIRRYADIVVHRLLLAAALRGSTGDVKDNIISNKDLEELCR
HINNRNRAAQRAQKQSTELFQCMYFRDRSAESDERCVADGVIYSIRTNGVLVFVPRYGIK
GAAYMKNKEGLVISCQGAGSCQWEPGSLHRSQHKITSTTTTGDSMTLSLFDHITVRILVQ
TSRCHAETIKLEIIRNAPHRTADTEAAHRSSQVRSDLVKEVSQSAEEAQRAQERARLEVM
DEESREFCQTKGPSLYQLLEEIRELALLDVTEDIRT |
NT seq |
3171 nt +upstreamnt +downstreamnt
atgctccgcacggagaaggtgctgcagctgcgggggcagcacggccgcgccgtgcgggtg
gtgcgggagcactacctgcgccccgacgtgccgtgccgcagcgccctgtgccgcagcgcc
cagtgccgcgccgcctgcgcccgcgatggcaaattgttatcagatgatgtcacacactac
gttgtccccgactgcaaggttgttcaggagtacctggagattctggaatttccagagctg
aaaggaattattttcatgcaaacagcttgtcaggctgtgcaacatcagaaaggacgaaga
cagtacaacaagttacggaatctattgaaggatccccgtcatgactgcactgtgtttgct
aatgaatttcaccagcactgctacctgcccagggagaagggagaatccatggagaagtgg
cagaccaggaatatttacaatgcagcagcctggtatcacaatcactgcctgggtcagatg
ccagttgttatggtaacagaagatgaagatgctatcaggcagtacggaaatgaaacagaa
ggagtgtttgtgatttccttcaagaattacttggataacttctggcctgacctgaaggct
gcccatgagctctttggctccatagtccaagctcggcgtgaacgggagagtgaaagccaa
gagaaccatggcaaagaatatcctgagcacttacctgtggaagtgttggaggctgggatc
aagtctggaagatacctgcagggtgccctgaatgtcaataagcaccgagcacagctggaa
gcttttgttcggctgcaggggattggcagcaaagacacggaacttcaaagtgacatcctt
atttatggggccaaggctcggaatcgtgcaatccacggggatgtggttgtggttgagttg
ctccctgtgcatgaatggaagggaaggactgttgccctctgtgaaaatgagactgaggaa
aaagcacctgcagacaccacaggtgatcctatgcccacaggcaaagtagttggaatcatc
cagaagaactggagggattatgtggtcactttcccctccaaagaagagagccagtcccag
ggcagaaatgctcagaaagtccttgtaacaccttgggattaccgaattcccaaaatccgg
atcagcactcagcaggctgaagcattgcaggagtaccgagttgtcgtgcgcatcgattcc
tgggagtcgacttccctgtaccccaacgggcactttgtgagagtgctggggagaattgga
gatcttgaaggggaaattgcagctattctggtggagaacagcatttgtgctgcccctttc
tcagaaatccagatgagtgaaatgccagcgagttctccaaagaatccatggaaagtgagt
ccagaagaggagaaaaaacgcctcgacttgagagataaccacctgatattcagcattgac
cccaagggctgtgaggatgtggatgatgctctctctgtcaggactctgcccaacgggaac
ctcgagctgggggtgcacattgcagatgtcactcacttcgtggcagcaaattcctacact
gatgttgaggccagagcaagggctaccacgtattacctggcagaccggcgctatgacatg
ctgccctccgtcctcagcgctgacctgtgctccctcctcagcggagtggacagatacgct
gtgagcgtcttgtgggagctggagaaggaatcgtacgagatgctgagtgtgcagtacacc
agaagcctgatccgctctgcctacaagctggagtatgagacagcccagggactgttggat
ggggacacgagtgtcgtgggggatatcctggaactgaaaagcctggatgaaggaacgagg
cagaagaagctggctgagctggtttgggccgtatccaagctcaccgacatagcgcgacac
gtccgggctgagcgggaccgctgcggcgcgctggagctggaagggatcgagatccgggtg
cagctggatgacaaacgcaatatccatgacctcatccccaagcagccgctggaagtgcac
gagaccgtggcggaatgcatgatcctggccaaccactgggtggcgaaaaggattgccgag
gcttttccccaccaagctctgctgcggcagcaccctccgccacgccaggaattcttcact
gagcttcgggactgtgccagtgccaaaggcttctccatagacacacggtctaacaaggct
ttggccgagtctctggacagagcaaacgacccctcggatcccattgtgaacaaactgctg
cgctccatggccacccacgccatgtccaacgccctgtacttctcaactggctcttgtccc
gaggagcagttccatcattacgggctggccctggagaagtacactcacttcacttctccc
atcaggagatacgctgacatcgttgtgcacaggctcctgctggcagccgccctgagggga
agcacgggggatgtgaaggataacatcatcagtaacaaggatctggaggaattgtgcaga
cacatcaataacaggaaccgggcagcccagcgtgctcagaagcagtccacagagctcttc
cagtgcatgtacttccgagacaggagcgccgagagcgacgagcgctgcgtggccgacggc
gtcatctactccatccgcaccaacggcgtgctcgtcttcgtgccccggtatggaatcaaa
ggtgcagcctacatgaaaaacaaagagggcttggtcatctcctgtcaaggggctgggagc
tgccagtgggagcctggatccctccatcgctctcagcataaaatcacctccactacaact
actggagactcgatgaccttgagcctttttgatcacatcacagtgagaatccttgtgcag
acctcgcgctgccatgctgaaaccatcaagctggagatcatcaggaacgcgccgcaccgc
actgcggacacggaggctgcccacaggagctcccaggtgaggtctgacctggtgaaagaa
gtcagccagtctgcagaggaggcccagcgggcccaggagagagccaggctggaagtgatg
gatgaggagtcccgggagttctgccagaccaaggggcccagcctgtaccagctgctggag
gagatccgggagctggcactgctggatgtgacagaggacatcaggacttga |