Taeniopygia guttata (zebra finch): 100217830
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Entry
100217830 CDS
T01082
Symbol
ARHGEF4
Name
(RefSeq) rho guanine nucleotide exchange factor 4 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
100217830 (ARHGEF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tgu04131
]
100217830 (ARHGEF4)
Membrane trafficking [BR:
tgu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
100217830 (ARHGEF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_9
SH3_2
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
100217830
NCBI-ProteinID:
XP_030136023
LinkDB
All DBs
Position
9:2421326..2644242
Genome browser
AA seq
2247 aa
AA seq
DB search
MHQRNQECQGSAVRRTAGETEESTSEKTQCHTETPQPVENYISEGEFEDDLSSSTPSTTE
LEVRGSSQETDEDYFETVSHQSGSLSDVKTEPYESASDTESLSSDITGNACSDSNCLFIE
KKPLCCNLPKEKAETFHELKSSRQPEFTQHIQLELSSKIKEAPSKTEFCIQFAELEGEEL
GDEELTLSSDISITESQGHEESILSQAKRKSGAALQSKAELENREVQSYTNPVLAENDTA
RVKEHPAVFSIACFKANSESCLIFPEVQQFSFQSDAAPSCSLPNLHFETNEPNCKSDTET
SDCKCELESMSSIKCSRRNSADSEDTSDKRIKHGSTETMLTSDSLFYQSCFNPKPRLPYT
RSEITESKTWHSAPENISAQRETECVVSCIHPTDKFRWSCSTLHLQELDFEYTWKNLGRV
TVSPEKAIEIEGQFGIKKSLLDTDTTSKVCQVSQPAASPQCIDYLHSKSETCGLSPEPAG
TCVDSLTRSDACEDNPNQKEKSSSLDCGPGIISAEELTQNNEHKAERDLEANRFPCDTDV
ESDTGDTESPAASHAGVPAGVESRDCECSVNCVSSTAIQHKHLKENGLESELSDMEIVAG
ERWADDSSDLGFGWKVLETATQPDGRDRGAEHGESLQQNASCKTGALRSHSELGTNEHPI
HKGKDEESVFAVERTPRSDYIRQGRDLMATPELKPAPIIVSVEEKGLQSKTLNDNLPTEV
VAETLGNGVSKDLLSPPHTVSKAHGEPERVLSESWNCEELILATHPIPGSAEVLSGRDAA
EVKSEISEEKRGKTESVSSLGFTCSNSAVASTKLEFRNVAVPLGSDTLTAEIQTDPCEKS
LIKSPSGGGVRLSEDEPCRAGALVTGAVTLEGSSSVSSVCQGHGAGVSLERPSTVKSQGR
SGVMAFEEEPCRTNRGFELRTEHLGKSGFRNPGRSNDQVSKEEEFKAHQSTEEGLNITRA
VTVQMSSSESSLWQGDGAGVSLQGPSMVSGQAVGRQGKEICNGSKEETGICEEPSPREGK
EGSPAGHTSSPSKDSALSLDVSDVFDESLNRETHSTFMLGLDSVSTCSTNSEELDENSSH
ILGSNSSLHKAVQKPTKSENSGKTSRFLVFPKMTSFKKTKPASWENQGSSSIFGSKAKME
DLDVGKDDEDTASLLSFRSCSSGLVFHRKESYTSEYSDDDDLFYERPAGFFNRLSLRKAS
GSGRILMEDADRQVSGSSENNDSETAEHSGIRKSFPENEHKRNKTPEGKKFRTRLALAHK
SLSSLFESKCPEKENTEQSSKASVKNEKEKAKLRHSTWKALLKSKEADGLKRPVLVSLSS
TQESLNATGGHALTPEERQHSSTFFKTETDNGSLTNSNYFDSSMEPVDVSLPARMWRRRI
QSHDLGIRYSQSSDCDEQQEVLSNSLNTSLEEYWMKSPFSPTDLQLAFSQSSPSCPQLSS
SDGKDMPCRPMSPKPQSSRSTSQHKNFRYPGRACAASMISLGSSSAVESSLEAPERPKAL
KPRGSLLHSLDDFQRDDSGISSQSQISLNTASSISDMLQDECVKQESKQPCQTAPGKRPN
KKWVPHRKRRPPRVPPCPVSTLESRACRLSFLAPDEKAKEIPERRRKRPKPLYKCFSFDD
VWMERNQKRKLEKETQPEGGVQLQHLPQDPSQAGISPSITSPVAFDILPLKLHPFSQSTP
TGLDCVGWKRRISAPVITDGALDKTALTDDVGSEEDLYEDFRSSNHRYGHPGGGGEQLAI
NELISDGSVVYAEALWDHVTMDDQELGFKAGDVIEVMDATNKEWWWGRILDSEGWFPASF
VRLRVNQDEPMEDYPLKVEGGKEDDSRRFGMGQTTKDQMRTNVINEIISTERDYIKHLKD
ICEGYIKQCRKRADMFTEEQLKTIFGNIEDIYRCQKKFVKALEKKFNKDHPHLSEVGSCF
LEYQTEFQIYSEYCNNHPNACLELSRLTKVNKYVYFFEACRLLQKMIDISLDGFLLTPVQ
KICKYPLQLAELLKYTNPQHRDFKDVEAALNAMKNVARLINERKRRLENIDKIAQWQSSI
EDWEGEDVLVRSSELIYSGELAKISHPQAKSQQRMFFLFDHQLVCCKKDLLRRDILYYKS
RINMDDMEILDVEDGKDKDFNISVKNAFKLHCRDTEEVHLFCAKKPEQKQRWLKAFENER
RQVQLDQETGFSITEVQKKQAMLNASKQHHAGKPKAVTRPYYDFLMRQKHPTLPSTLPQQ
QVFMLAEPKRKPSNFWQNISRLTPFRK
NT seq
6744 nt
NT seq
+upstream
nt +downstream
nt
atgcatcagaggaaccaggagtgccaaggaagtgctgtaagaaggactgctggagaaaca
gaagagagtacttctgagaagacacagtgccacactgagaccccgcagccagttgaaaac
tacatcagtgaaggagagtttgaagacgatctgagttcttctaccccaagcacaacggag
ctggaggtccgtggatccagccaagaaacagatgaagattattttgaaactgtgtcacat
cagagtggatctttgtcagatgtaaaaactgagccttatgagagtgcatcagacacagaa
tccctttccagtgacataactgggaatgcttgctcagattcaaactgcctgtttattgaa
aaaaaacccctgtgctgcaatcttcccaaagaaaaggcagaaaccttccatgaactgaag
agctccaggcaaccagagttcacccagcacatacagctagaattgtcctccaaaataaaa
gaagcaccaagtaaaactgaattttgcatccagtttgcagagttagagggtgaagaattg
ggtgatgaagagctaacgttatccagtgatatttccatcacagagagccaaggccatgaa
gagagcattttatcacaggcaaagagaaagtctggggcagcactgcagagtaaggcagag
ttagaaaacagggaagtgcagtcctataccaacccagtacttgcagaaaacgatactgca
agagtgaaggaacatcctgcagtatttagcattgcctgtttcaaagcaaactcagaaagt
tgtttgatttttcctgaggtacagcagttttccttccagtcagatgcagcaccaagctgt
agtttgcctaatcttcattttgaaacaaatgagcctaactgtaaaagtgacactgagaca
tctgactgtaagtgtgaattagagtctatgtccagtataaaatgcagcaggaggaattca
gctgacagtgaggacacttcagataaaaggataaaacatggaagtacagagaccatgctg
acatcagattcactcttctaccagagttgcttcaacccaaaacctcggctaccatacaca
aggtcagagattacagaaagtaaaacatggcacagtgcacctgaaaatatcagtgctcaa
agggagacagaatgtgtggtgagctgtattcacccaacagacaaatttagatggtcatgt
tccacattacatcttcaagagctggattttgaatacacttggaaaaacttaggaagggta
actgtaagccctgaaaaggctatagaaatagagggccagtttggcataaaaaaatctctt
cttgatactgacacaacctcaaaggtgtgtcaggtttcccaaccagcagcctctcctcag
tgcattgattatttgcactctaaatcagagacatgtggccttagcccagagccagctggt
acttgtgttgacagcttaacacggagtgatgcttgtgaggacaatccaaaccaaaaggag
aaatcctcttccctggattgtggtccagggatcataagcgctgaggaactgacacaaaac
aatgagcacaaagctgaaagagatctggaagcaaacagattcccatgtgatactgatgtt
gaatcagacactggtgacactgagagccctgcagcttcacatgcaggtgttcctgctggt
gtggaaagcagagactgtgagtgttctgtaaactgtgtttccagtactgcaatacagcac
aaacatttgaaggagaatggccttgaatctgagctgtcagatatggagattgtggcagga
gaaagatgggcagatgattcttctgatcttggctttggttggaaagtcctggaaactgca
acacaaccagatggccgtgacagaggggcagagcacggagagtcactgcaacaaaatgca
agttgcaaaaccggtgccttaaggagccactcagagctaggaacaaatgaacatcctatt
cataaaggaaaggatgaagagagtgtctttgctgttgaaaggactcccagatcagattat
ataaggcagggacgggatttaatggctactccagaattaaagcctgccccaattatagtc
tctgtagaggagaaaggattacagtccaaaacactgaatgacaaccttcctactgaagtg
gtggctgaaacattgggaaatggagtgagcaaggatttgctgtctcctcctcatactgtc
agtaaagctcatggcgagccagagagagttctgagtgaaagctggaactgtgaagaacta
attctggccacccaccccattcctggcagtgcagaggtactctctggtagggatgcagct
gaagtaaaatcagaaatttcagaagagaaaagagggaaaacagaatcagtttcatcctta
gggttcacctgtagtaattctgcagtagcaagtaccaaactggaattcaggaatgttgct
gtaccactaggtagtgatacacttactgcagaaattcagacagatccatgtgaaaaatca
ctcataaaatctcccagtggaggtggtgtgaggctctctgaggatgagccctgcagggca
ggggcactggtgactggtgcagtgacactggaaggcagcagcagtgtaagcagtgtgtgc
cagggacatggtgctggtgtcagccttgaaaggcccagcactgttaaatcacagggtaga
agtggtgtgatggcctttgaggaagagccctgcagaacaaataggggttttgaattaagg
acagaacatttaggaaagtcaggctttagaaaccctggaagaagcaatgatcaggtgtct
aaggaagaggaattcaaagcacatcaaagcacagaggaaggtttgaatattaccagggca
gtgacagtgcaaatgagcagcagtgaaagcagtttgtggcaaggagatggtgctggtgtc
agccttcaagggcccagcatggtctctggacaagcagtaggcaggcaaggaaaggaaatc
tgcaatggctcaaaggaagaaacaggtatttgtgaggaaccctctcctagggaaggaaag
gagggctctcctgcaggacacacctctagccccagcaaagacagtgcactgagtctggat
gtgtctgatgtctttgatgagtctctgaacagggagactcacagcactttcatgctgggc
ctcgacagtgtaagtacctgcagcactaacagcgaggaactggatgagaactcatcccac
atcctggggagtaacagcagccttcataaagctgtacaaaagccaacaaagagtgagaat
agtgggaaaacttccaggtttttagtattcccaaaaatgacatctttcaagaaaactaag
cctgcctcatgggaaaatcagggaagcagcagtatctttgggagcaaggctaagatggaa
gacctggatgttgggaaagatgacgaagacactgcaagtttattgtctttcagaagttgt
tcttctggtttagtcttccacaggaaggaaagctacacctctgagtactctgatgatgat
gatttattttatgagagacctgcaggatttttcaacagattaagcctgaggaaggcctct
ggctctggtcggatactgatggaagatgcagatcgacaagtttcaggttcatctgaaaac
aatgacagtgaaactgcggagcattcagggattagaaaatcattccctgaaaatgaacac
aaaagaaacaaaacccctgagggtaagaaattcaggacaaggttagccttggcacacaaa
tccctctcaagcttatttgagtctaaatgtccagaaaaggaaaacactgagcaaagctca
aaagcatcagtgaaaaatgaaaaggagaaagccaaacttcgccatagcacctggaaagct
ttactaaaaagcaaggaggcagatggactaaaacgacctgttttagtaagtttatcatcc
acacaggagagtcttaatgcaactggtggccatgcgttaacaccagaggagcgacagcat
agttccactttttttaaaacagaaacagataatggctccttaacaaactccaactatttt
gacagctctatggagcctgttgatgtctctttacctgcacgtatgtggagaagacgaata
cagtcccatgacttgggtatcagatactcacagagttcagactgtgatgaacagcaggag
gttctgagcaacagtttaaatacttctctagaggaatactggatgaaatctccatttagc
cccacggacttgcagctggcatttagtcagtcaagtccatcatgtccccagctctccagt
tctgatggtaaagacatgccttgtaggcccatgagtcccaaacctcagagttcacgatcc
acttcccagcacaagaacttccgttatcctgggcgagcatgtgccgcttccatgatctct
ctcgggagcagctctgcagtggaaagcagtctggaggctcctgagagaccgaaggctctg
aaacccagaggaagtctcttacactcgttggatgacttccagagggatgacagtggcata
agcagtcaatcccagatcagcttaaacacagcttcttccattagtgacatgctccaagat
gagtgtgtaaaacaggagtctaagcagccatgtcaaacagcacctggaaagaggccaaat
aagaaatgggttccccatcgcaaaaggaggcccccccgggtcccaccatgccctgtgtcc
accctggagagcagagcctgcaggctctccttccttgctccagatgaaaaagccaaggag
atcccagagaggaggaggaagagacccaaacccctctataagtgcttcagcttcgatgat
gtttggatggagagaaatcaaaaaaggaagctagagaaggagacacagccagagggaggg
gttcaattgcaacatctcccacaggacccctcacaagctggaataagtccatccatcaca
tctcctgttgcctttgatatcctgccactgaagctgcatccgttttcccagagcaccccg
acaggcctggactgcgtgggctggaaacggcgcatctctgctcccgtgatcactgatgga
gccctggacaagacagccctgacggacgatgtggggagcgaggaggatctgtacgaggat
ttccgcagctccaaccaccgctacggccaccccgggggcggcggcgagcagctggccatc
aacgagctcatcagcgatggcagcgtggtgtacgcagaggccctctgggaccacgtcacc
atggacgaccaggagctgggcttcaaggccggcgatgtcatcgaagtgatggatgccacc
aacaaggagtggtggtgggggaggattctggacagtgaaggctggtttccagccagcttt
gttcggctgcgagtgaaccaggatgagcccatggaagattatcccctgaaggtggagggg
ggcaaagaggacgactcccgacgctttgggatgggccagaccaccaaagaccaaatgagg
accaatgtcatcaatgagatcataagcacagagagagactacatcaagcacctgaaggac
atttgtgagggttacattaagcagtgccgcaagagagcagacatgtttacagaagagcag
ctgaagacaatctttgggaatattgaggacatctacaggtgccagaagaaatttgttaaa
gcactagagaagaaatttaacaaagaccacccccacttgagtgaggttggctcatgcttc
ttggaatatcaaacagagtttcagatctactccgagtactgcaacaaccaccccaacgcc
tgcctggagctgtcgcgcctcaccaaggtcaacaagtacgtttacttcttcgaggcctgc
cgcctgctgcagaagatgattgacatctccctggatggcttcctgctcacccccgtgcag
aaaatctgcaaataccccctgcagctggccgagctgctcaagtacaccaacccccagcac
agggatttcaaggatgtggaggctgccttgaacgccatgaagaacgtggctcggctcatc
aacgagaggaagcggcggctggagaacatcgacaaaatcgctcagtggcagagctccatc
gaggactgggagggagaagatgtcctagtccgaagctcagaactcatctattccggggaa
ttggccaaaatctcccaccctcaagccaagagccaacagaggatgttcttcctcttcgat
caccagcttgtctgctgcaagaaggacctcctgcgcagggacatcctgtactacaagagt
cggatcaacatggatgacatggaaatactggatgtagaagatggcaaggacaaggacttc
aatatcagtgtgaaaaatgcatttaagctgcactgcagggacactgaggaagtccattta
ttttgtgcaaaaaagcctgagcagaaacagcgctggctgaaggcgtttgagaatgaaagg
aggcaggtgcagctcgaccaggagacaggtttttccatcacggaggtgcagaaaaagcag
gcaatgctgaatgccagcaagcagcaccacgctgggaagcccaaggctgtcaccaggccc
tactacgacttcctgatgcggcagaagcaccccacgctgcccagcacgctccctcagcag
caggtcttcatgctggcagagcccaagcgcaagccctccaacttctggcagaacatcagc
cggctgacgcccttccggaaatag
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integrated database retrieval system
