Taeniopygia guttata (zebra finch): 100217869
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Entry
100217869 CDS
T01082
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100217869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgu03019
]
100217869
Messenger RNA biogenesis [BR:
tgu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100217869
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
100217869
NCBI-ProteinID:
XP_004177311
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Position
4A:16199886..16221863
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AA seq
564 aa
AA seq
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MATELEPPAAGAVSGAAPLEAEEDEEHWLYGDDTTGKQEDGPISGHTESAHPLQDAPQES
RPVNNEDREMSQHALPSGEDDEDDSDSDSDDDDVKVTIGNIKTGAPSYMGTPMNLNLKTG
RGYGASASAKLQPKGIDLDAAGNINGLPVIEVDLDSFEDKPWRKPGADLSDYFNYGFNEE
TWKAYCEKQRRLQLGLDPAPPISTENKITVQQGRTGNAEKEVESNIIKTEFKTDFLALVG
GRMKAGPPPNRKLGGTIDVIGGQAGTIRRVEGRRRDKHASEENPIQVLGDHGSKPQPPQQ
PQQPSQPQQPPQQQPFAPPAGPPPPPLAGPPPPHFLHPPPPVTSVPPPLHPPGLPPPGPI
PGLFPPPLAPPPALLIPTLDGQPASYNNRQPPPFGYNSADSGFISYPPISTSHTPWVTTV
DKGTSSSSSSHWEYSGSRRDRERERERERDRERDRDRDRTPTTSEYNNDDERYRYYSRER
SYDFERDYRRSRDRSREREERHRERRHRDKDDGSKHKSSRRKQHESEEGESHRRHKHKKN
KRSKEEKEASEDGAQEGEEQDTKE
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgagctggagccgccggccgccggcgccgtgtcgggcgcggcgccgctggag
gcggaggaggacgaggagcactggctgtacggggatgacaccactggtaagcaagaagat
ggaccaatttctggacacacagaatctgctcaccctctgcaggatgctccccaggagagc
cggcctgtcaacaacgaggacagagagatgtcccagcacgcccttcccagtggtgaagat
gatgaggatgacagtgacagtgacagcgatgatgatgatgtgaaggtcacaattggcaac
atcaaaacgggagcaccgtcctacatgggaactcctatgaatctaaacttaaaaacgggt
agaggctatggagcatcagcttcagccaagttgcagcccaaaggtattgacttggatgcc
gcagggaatataaatggattgcctgtgatagaagtggatttggattcatttgaagacaaa
ccgtggaggaaaccaggtgctgatctttctgattattttaattatggattcaatgaagaa
acatggaaagcttattgtgaaaagcagcggcggcttcagctggggctggaccctgctcct
cctatcagcactgagaacaagatcacggttcagcagggaagaacaggaaatgctgaaaaa
gaagtggaaagcaacatcatcaaaacagagttcaaaacagacttcttggctctggtggga
ggacgaatgaaggctgggcctcctcccaacaggaagctgggtgggaccattgatgtgatc
gggggccaggcaggcacaatccgcagggtggaagggagacgccgggataaacacgcctcg
gaggaaaaccccatccaggttctgggagaccatggcagtaagccccagcccccccagcag
ccccagcagccctcccagccccagcagcctcctcagcagcagcccttcgctccaccagca
gggcctccgcctccaccgctcgccgggcctcctcctccacacttcctgcaccctcctcct
ccagtgacttctgttccacctcccctgcaccctccaggcctgccacctccaggtccaatt
ccagggttgtttccaccacctctggcaccaccaccagctctcctcatcccaaccttggat
gggcagccagccagctacaacaacaggcagccacctccctttggctacaactctgcagat
tcaggtttcatcagctacccccccatctccacgtcccacacgccctgggtgaccacggtg
gacaagggcacgagcagctccagcagcagccactgggagtactcgggctccaggcgggac
agggagcgcgagcgggagcgcgagcgggacagggagcgagaccgggaccgggaccgcacc
ccgaccaccagtgaatacaacaatgacgacgagcggtaccgctactacagccgcgagcgc
agctacgacttcgagcgtgattaccggcgcagccgcgaccgcagccgcgagcgcgaggag
cggcaccgcgagcgccgccaccgcgacaaggacgacggcagcaaacacaaatcctcccgc
aggaagcagcacgagagcgaggagggcgagagccaccggcgccacaagcacaaaaagaac
aagcggagcaaggaggagaaggaggccagcgaggacggtgcccaggagggcgaggagcag
gacaccaaggagtga
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