Taeniopygia guttata (zebra finch): 100217886 Help Entry 100217886         CDS       T01082                                  Symbol THOC2 Name (RefSeq) THO complex subunit 2 isoform X1   KO K12879   THO complex subunit 2 Organism tgu  Taeniopygia guttata (zebra finch) Pathway tgu03013   Nucleocytoplasmic transport tgu03040   Spliceosome Brite KEGG Orthology (KO) [BR:tgu00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     100217886 (THOC2)   09122 Translation    03013 Nucleocytoplasmic transport     100217886 (THOC2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:tgu03019]     100217886 (THOC2)    03041 Spliceosome [BR:tgu03041]     100217886 (THOC2) Messenger RNA biogenesis [BR:tgu03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      100217886 (THOC2) Spliceosome [BR:tgu03041]  Complex C   Other components    EJC/TREX     100217886 (THOC2)  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     100217886 (THOC2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 Motif Other DBs NCBI-GeneID:  100217886 NCBI-ProteinID:  XP_030128482 Ensembl:  ENSTGUG00000003682 LinkDB All DBs Position 4A:complement(9488271..9537499) Genome browser AA seq 1608 aa AA seqDB search MAALLPAEWIKNWEKGGKSEFVQLCRALSENKNHDVGFRDIQQALYELAYHVVRGNLKHD QASNVLGDVIEFREDMPSILADVFCILDIETSCLEEKNKRDHFTQLVLACLYLVSDTVLK ERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDLS GNITSDLILENIKSLIGCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYMYMCEPQTL CHILGFKFKFYQDPSGETPSSLYRVAAVLLQHNLIDLEDLYVHLLPGDNAIIEEHKRDIV EAKQIVRKLTMVVLSSEKTEEKEKEKEKEEEKTEKPPDNQKLGLLEALLKIGDWHHAQSI MDQMPPFYSTAHKPIAIALCQLVHVTIEPLYRRVGVPKGAKGSPISSLPNKRAPKQAESF EELRKEVFNMLCYLGPHLSHDPILFAKVVRLGKAFMKEVGTVKKFVSDRVVKFQSDGSKQ EDKEKMETLFSCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQYRYRLYGQWKNE TYNSHPLLVKVKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKY DNLITPVVDSLKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVF RKYPIELAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLK AEGGYFGQIRNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVVFQEGGEKHLKLVGKLY DQCHDTLVQFGGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKY DELKKAEKGNKQQHKVHKYITSCELVMAPVHEAVISLHLPKVWDDISPQFYATFWSLTMY DLAVPHSSYDREVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQLEHVQ RVLQRLKLEKDNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCAHFVELVHQQKTPN FSTLLCYDRVFSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRVIYEKECGNYPGF LTILRATGFDGGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKI LPWYPKVLNLGQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKPFMIPENEFHHKD PPARNAVPAPVQNGPGGAGMPTSLTINTVRLEEGTTEETADKLKEKSQGVVKVINKTVNA TPKVTTSNGNSASNSKIIKEKDDKEKSGKEKDKEKKEKTPAATPEMKALGKDGKDKPKEE RANKDEKAREIKEKTPKSDKEKEKVKKEEKASKEEKSKTVVTIIESKSTAEKEREKEPSR ERDLAKEMKSKENAKGGEKVPVAGSLKSPVPRSDTSESEREQKRRKVDTHSSPSHSSTVK DNLNELKDSSAKHYINHTTPTLSKSKEREVEKKDLDKSRERSREREKKDEKDRKDRKRDH SNNDREVPQDSTKRRKDENGTTGSSKHSKSESPSDSPRLNEKEKEKNKSKSSGKEKGDSI KAEKMEKSSSGSKKESRHDKEKAEKKEKRDSTGGKEEKKHHKSSDKHR NT seq 4827 nt NT seq  +upstreamnt  +downstreamnt atggcggcgctgctcccggccgagtggataaagaactgggagaaaggcggcaagagcgag tttgtgcagctgtgtcgtgctctcagtgaaaacaaaaatcatgatgtgggtttcagagat attcagcaggctttgtatgagcttgcttaccatgttgtcagaggaaacttaaagcatgat caagcttctaatgttcttggtgatgtcatagaattccgagaagacatgccttctatccta gctgatgtattctgcatattagatattgaaacaagttgtttagaagaaaaaaataagagg gatcattttacacagctggtattggcctgtttgtatcttgtatctgacactgtcctaaag gagcgtttagatccagagacactggagtcattgggactcatcaagcagtctcaacagttc aatcaaaaatctgttaaaataaagacaaaactattttataagcaacagaagtttaatttg ctaagagaggagaatgaaggttatgcaaaactcattgcagaattgggtcaagacttatct ggaaatatcactagtgatttaatccttgaaaatatcaaatctttaataggatgtttcaat cttgatcctaacagagttttggatatcatcctagaagtctatgagtgcaggcctgagtat gatgatttctttgtaccactgatagagtcttacatgtacatgtgtgagcctcaaactcta tgccatatacttggtttcaaattcaagttttatcaggatccaagtggtgagaccccttcc tccttatacagagttgctgctgtccttttgcaacataatctcatagatttggaagatctt tatgttcatcttctaccaggggataatgccatcattgaggaacacaagcgagacatagtg gaagctaaacaaattgtcagaaaacttacaatggtcgtcttatcatctgaaaagactgag gaaaaggagaaagaaaaggaaaaagaggaggagaagactgaaaagcctcctgataatcaa aaacttggcttattggaagccttattaaaaatcggtgattggcaccatgcacaaagtatt atggatcagatgcctccattttactctactgcgcacaagccgattgccatcgcgctttgc cagctcgtccacgtgacaattgagcctctgtaccgcagagttggtgtacctaaaggagct aaagggtcaccaatttcctctttgccaaacaagagagcaccaaaacaagcagagagcttt gaggagttgagaaaggaagtgttcaacatgctttgttaccttggtcctcatctgtcccac gatcccattttatttgcaaaagtagtgcgccttggaaaagcatttatgaaagaggttgga actgtgaagaaattcgtcagtgacagagtggttaagtttcagtctgatggaagcaaacaa gaagataaagagaaaatggaaacactgttcagctgtttgttgagtattactgatcaagtc ttgcttccatctctttccttgatggactgcaatgcatgcatgtctgaggaattatgggga atgttcaaaacctttccataccagtaccggtaccgtctgtatgggcaatggaagaatgaa acatacaatagtcacccactgcttgtgaaagttaaagctcaaaccatagatcgagccaaa tatatcatgaagcgtttaactaaggaaaatgtgaaaccctctggaaggcaaattgggaag ctcagccacagcaatcctacaattttatttgattatattttatcacaaatacaaaaatat gataatttgataactccggttgttgattcgctgaaatacctcacttccttgaactatgat gtcttggcatattgtatcattgaagcattggcaaaccctgagaaggagagaatgaaacat gatgacactacaatctcaagctggctgcagagtctggcaagcttttgtggtgccgttttc cgaaaatacccaattgaacttgcaggcctcctgcagtatgtagccaaccagctgaaggct ggcaaaagctttgatttgcttattttaaaagaggtagtgcagaaaatggcaggaatagaa attactgaagaaatgacgatggaacaattggaagccatgactggtggagaacaactgaaa gctgagggtggatattttggccaaatcaggaatacaaagaaatcatctcagagattaaaa gatgcattattggaccatgatcttgcccttccactgtgcctgcttatggctcaacagaga aatggtgttgtctttcaagaaggaggggaaaaacacctgaagctggtgggaaaactgtat gatcagtgccatgacaccctggtacaatttggtgggtttttagcatccaatctaagcaca gaggattacattaagcgagtgccttctattgatgttctctgtaatgagtttcacacacct catgatgctgcatttttcctctcaagacccatgtatgcacaccacatttcatcaaagtat gatgaactaaaaaaagctgagaagggaaataaacagcagcacaaagttcacaaatacatt acatcatgtgagttggtgatggctcctgttcacgaagctgtgatttctctgcacctccct aaagtctgggatgacatcagccctcagttttatgctacattctggtctttaacaatgtat gaccttgccgtgccacacagcagctatgacagagaagtcaataaacttaaagtccagatg aaagccatagatgacaatcaggaaatgcctccaaataaaaagaaaaaagaaaaagaacgt tgcacagctctgcaggacaagctccttgaagaggagaagaagcagttggagcatgtgcag agggttctacagagactgaaactagagaaagataactggcttctggcaaaatctaccaaa aatgagactatcaccaaatttttacagttgtgtatatttcctcgctgtattttttcggca attgatgcagtttactgtgctcactttgttgaactggtgcatcaacagaaaacacccaat ttctccactcttctctgttatgaccgagttttctctgatatcatatatacggttgcaagt tgcacagaaaatgaagccagtagatatggcagatttttatgctgtatgctggagactgtg accagatggcacagtgacagagtcatatatgaaaaggaatgtggcaactatccgggtttc ctaaccatattaagagcaactggatttgatggtggaaataaggctgatcaattggattat gagaattttagacacgtggtacacaaatggcactataaattaactaaggcttctgtgcac tgtctggaaacaggtgaatatacacatatcagaaacatcctgattgtgctgaccaaaatc cttccatggtatccaaaagtgctgaacctgggtcaagccttggaaagaagagtacacaag atatgtcaggaagagaaagagaagagacctgatctatatgcattggctatgggctattct ggacagttgaaaagtaggaagcctttcatgatacctgaaaatgaatttcaccacaaagac ccacctgccaggaacgctgtacctgcaccagtacaaaatgggccaggtggtgctgggatg cctacgtctctcacaataaatacagttagactggaggagggcactactgaggagactgca gataaactaaaggagaaatctcagggtgtggtgaaagttattaataaaactgtcaacgct acaccgaaggtgacgacaagcaatggaaacagtgcatctaatagcaaaattattaaagag aaagatgataaagaaaaaagtgggaaggaaaaagataaagaaaaaaaagaaaagactcca gctgccactccggagatgaaggcacttgggaaagatgggaaagataaaccgaaggaagaa cgggcaaacaaagatgagaaagcacgagagatcaaggagaaaacgccaaaatctgacaaa gagaaggaaaaggtgaagaaagaagaaaaagcttcaaaagaagaaaagtccaagacggtt gttaccatcattgagtcaaagtcaactgcagaaaaggagagagaaaaggagccatccaga gaaagagatctagcaaaggaaatgaaatccaaggaaaatgctaaaggaggagaaaaggtg ccagtagctgggtccttgaagtcacctgttccccgatcagatacatcagaatctgaaagg gaacaaaaacgccgcaaagttgatacacattcttctccgtcacattcctcaacagtaaag gacaacctcaacgaactcaaggactcttcagcaaagcactacataaaccacactactcca acactgtccaagagtaaggagagagaagtggagaagaaagatttggacaagtcaagggaa agatccagagagagagagaagaaagatgaaaaggacaggaaagatcgaaaaagggatcat tcaaacaatgaccgagaggtaccacaggattcaaccaaacgacgcaaagatgaaaatggc acaactggttcgtcaaaacatagcaaaagtgaaagtccttctgattcccctcgcttaaat gaaaaggagaaggagaaaaacaaatcaaaatcttcaggaaaagagaaaggtgattcaatc aaggcagaaaagatggagaagagctcctctggtagtaaaaaggaatcaagacatgataaa gaaaaagcagagaagaaagaaaagcgggacagtactggggggaaagaagaaaagaaacat cataaatcgtcagacaagcatagataa

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