KEGG   Taeniopygia guttata (zebra finch): 100218065
Entry
100218065         CDS       T01082                                 
Symbol
RPS27A
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu03010  Ribosome
tgu04120  Ubiquitin mediated proteolysis
tgu04137  Mitophagy - animal
tgu04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    100218065 (RPS27A)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    100218065 (RPS27A)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    100218065 (RPS27A)
   04137 Mitophagy - animal
    100218065 (RPS27A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:tgu03011]
    100218065 (RPS27A)
   04121 Ubiquitin system [BR:tgu04121]
    100218065 (RPS27A)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tgu04147]
    100218065 (RPS27A)
Ribosome [BR:tgu03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    100218065 (RPS27A)
  Archaea
    100218065 (RPS27A)
Ubiquitin system [BR:tgu04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   100218065 (RPS27A)
Exosome [BR:tgu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100218065 (RPS27A)
  Exosomal proteins of colorectal cancer cells
   100218065 (RPS27A)
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 Dsc3_N IBR TBK1_ULD Ubiquitin_5 OTU1_UBXL
Other DBs
NCBI-GeneID: 100218065
NCBI-ProteinID: XP_002199635
Ensembl: ENSTGUG00000007086
UniProt: H0Z9N6
LinkDB
Position
3:84138332..84139996
AA seq 156 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRE
CPSEECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagaccctcacggggaaaaccatcaccctcgaggttgaaccttct
gatactatagaaaatgtaaaagcgaagatccaggataaggagggcatccctccggatcag
cagcggctgatctttgctgggaagcagctggaggatggacgcacactgtctgactacaac
attcaaaaagaatcaacccttcacctggtgctgagacttcgtggtggtgctaagaaaagg
aagaagaagtcttacacaactcccaagaagaacaagcataagagaaagaaggttaagctt
gcagtgctcaagtactacaaggtggatgagaatggcaagatcagccgcctgcgccgggag
tgcccctcggaggagtgtggggctggagtcttcatggccagtcactttgacagacactac
tgtggcaagtgctgtctgacatactgcttcaataagccagaagacaagtaa

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