KEGG   Taeniopygia guttata (zebra finch): 100218106
Entry
100218106         CDS       T01082                                 
Symbol
DHX35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35 isoform X2
  KO
K13117  ATP-dependent RNA helicase DDX35 [EC:5.6.2.6]
Organism
tgu  Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tgu03041]
    100218106 (DHX35)
Enzymes [BR:tgu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     100218106 (DHX35)
Spliceosome [BR:tgu03041]
 Complex C
  Other components
   Complex C specific factors
    100218106 (DHX35)
SSDB
Motif
Pfam: OB_NTP_bind HA2_C Helicase_C HA2_N AAA_22 ABC_tran DEAD AAA_19 UPF0203
Other DBs
NCBI-GeneID: 100218106
NCBI-ProteinID: XP_002189780
Ensembl: ENSTGUG00000004620
UniProt: H0Z2L0
LinkDB
Position
20:4594269..4623036
AA seq 703 aa
MAAPVGPVKFWKPGSEGPGVSVSEERQSPAESSAVTVIYNPYASLSIEQQRQKLPVFKLR
NHILYLVENYQTLVIIGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVSVAGRV
ADERGAVLGHEVGYCIRFDDCTDPQATRIKFLTDGMLVREMMADPLLTRYSVLMLDEAHE
RTLYTDIAIGLLKKVQKKRGDLRLIVASATLDAEKFRDFFNQNDTGDPSKDTSVILTVEG
RTFPVDIFYLQSPVPDYIKSTVETTMKIHQMENDGDILAFLTGQEEVETVVSMLIEQARA
LARTGMKKHLRVLPMYAGLPSPEQLKVFERVPHTVRKVIVATNIAETSITVHGIAFVIDC
GFVKLRAYNPKTAIECLVVVPVSKASAKQRAGRAGRSRSGKCYRLYTEEDFEKLPKSTVP
EMQRSNLAPVILQLKALGIDNVLRFPFLSPPPAQSMVQALELLYALGGLDMHCRLTEPLG
MRIAEFPLNPMFAKMLLESGNFGCSQEILTIAAMMQIQNIFVIPPNQKNQAARQHRKFAV
EEGDHLTMLNVYEAFVKHSKSSQWCQEHFLNYKGLVRASVVREQLKKLLVRFKVPKKSSE
GDPDPVLRCIVSGFFANAAKFHSTGAYRTIRDDHELHIHPSSVLYAEKPPRWVVYNEVIQ
TAKYYMRDVTAVESSWLLELAPHFYQQGTHLSLKAKRAKVDDH
NT seq 2112 nt   +upstreamnt  +downstreamnt
atggcggcgcccgtggggccggtgaagttttggaagccgggctcagaaggtcctggtgtc
agtgtctccgaggagaggcagagccctgctgagagcagcgctgtgactgtcatctacaac
ccttatgcttccctctccattgaacagcaaaggcaaaagctgcctgtttttaagctaaga
aatcacatactttacctagtggagaactaccagactctggtgattattggggaaacagga
tgtgggaaatcaacgcagattccacaatacctggcagaagctggctggacagccgaagga
agagttgttggggtgacacagcctcgtcgggtcgctgctgtttcagttgcaggccgagtt
gctgatgagaggggtgcagtgctgggacatgaggttggatattgtatccggtttgatgac
tgcacagacccacaggctacaagaattaagtttctaactgatggtatgctggtgagggaa
atgatggctgatcctttattaacaagatacagtgtcctcatgctggatgaagctcatgaa
aggactctttatacagacattgccattggcttactaaaaaaggttcagaagaagcgtggg
gatcttcgcctgatcgtggcttcagccaccttggatgcagagaaattcagggatttcttt
aatcaaaatgataccggtgaccccagcaaagacaccagtgtgattctcactgttgagggg
aggacgtttccagtggacatcttttacctacagagccctgttcctgactatataaaatca
actgtggaaacaacaatgaaaattcaccagatggagaatgatggtgatatactggcattt
ttaactggacaggaggaagtggagactgttgtttccatgctcatagaacaggctcgagcc
ctcgcccgcactgggatgaaaaagcacctccgtgttctgcccatgtacgctgggctgcct
tctcctgagcagctcaaagtgtttgagagagtccctcacactgtcaggaaggtgatcgtt
gccaccaacattgccgagacctccatcacggtgcacggcatcgcctttgtcatcgactgt
ggctttgtgaagctgcgtgcctacaaccccaagacggccatcgagtgcctggtggtggtg
cccgtgtccaaagcctcggccaagcagcgggcgggccgcgccggccgcagccgctccggc
aagtgctaccggctctacacagaggaggactttgagaagctgcccaagtccacggtgccg
gagatgcagcgcagtaacctggcccctgtcatcctgcagctcaaggctttggggattgac
aacgtgctcaggttccccttcctttcgccaccccctgcacagtcgatggtgcaagcttta
gagttgctgtatgctttaggaggtttggatatgcactgccgattaacagagccccttgga
atgagaatagcagagtttcctttgaatcctatgtttgcaaagatgcttctggaatcagga
aattttggctgttcccaagagattttgacaattgctgccatgatgcagattcaaaacatc
tttgtgatccctccaaatcagaaaaaccaggctgccaggcaacacagaaagtttgctgtg
gaggaaggtgatcatctgaccatgctgaatgtttatgaagcctttgtcaaacacagcaag
agctcccagtggtgtcaggaacactttctgaactacaaagggcttgtgagagcttctgtt
gtgagagagcagctgaaaaaacttctcgtccgctttaaagtgccaaagaagtccagtgaa
ggtgatccagatcctgttttgaggtgcatagtttctggattctttgctaatgcagctaaa
ttccactccacaggagcttacaggactatccgtgatgaccacgagcttcatatccacccc
agctcagtgctgtatgcagagaaacctccacgctgggtagtctacaatgaagtcatacag
actgctaaatactacatgagagatgtgacagccgttgaatcctcctggctgttggagctg
gcgcctcacttttaccagcaaggaacgcatctttccttgaaagcaaaaagggctaaggta
gatgaccactga

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