Taeniopygia guttata (zebra finch): 100218171
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Entry
100218171 CDS
T01082
Symbol
JAG1
Name
(RefSeq) protein jagged-1
KO
K06052
jagged-1
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04330
Notch signaling pathway
tgu04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100218171 (JAG1)
04371 Apelin signaling pathway
100218171 (JAG1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tgu04090
]
100218171 (JAG1)
CD molecules [BR:
tgu04090
]
Proteins
100218171 (JAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
MNNL
EGF_TEN
JAG1
EGF_2
EGF_DL_JAG
DSL
JAG1-like_EGF2
EGF_CA
EGF_Teneurin
CD34_antigen
DUF2920
Motif
Other DBs
NCBI-GeneID:
100218171
NCBI-ProteinID:
XP_012427726
Ensembl:
ENSTGUG00000006079
UniProt:
H0Z6T1
LinkDB
All DBs
Position
3:complement(88001365..88036702)
Genome browser
AA seq
1216 aa
AA seq
DB search
MRAPRRAAAAACSILTLLLALRAQVTLASGQFELEILSMQNVNGELQNGNCCDGTRNPGD
KKCTRDECDTYFKVCLKEYQSRVTAGGPCSFGSKSTPVIGGNTFNLKYNRNNEKNRIVIP
FSFAWPRSYTLLVEAWDYNDNSTNPDRIIEKASHSGMINPSRQWQTLKHNAGVAHFEYQI
RVTCAEHYYGFGCNKFCRPRDDFFTHHTCDQNGNKTCLEGWMGPECNKAICRQGCSPKHG
SCTIPGECRCQYGWQGQYCDKCIPHPGCVHGTCIEPWQCLCETNWGGQLCDKDLNYCGTH
PPCLNGGTCSNTGPDKYQCSCPEGYSGQNCEIAEHACLSDPCHNGGSCLETSTGFECVCA
PGWAGPTCTDNIDDCSPNPCGHGGTCQDLVDGFKCICPPQWTGKTCQLDANECEGKPCVN
ANSCRNLIGSYYCDCITGWSGHNCDININDCRGQCQNGGSCRDLVNGYRCICSPGYAGDH
CEKDINECASNPCMNGGHCQDEINGFQCLCPAGFSGNLCQLDIDYCEPNPCQNGAQCFNL
AMDYFCNCPEDYEGKNCSHLKDHCRTTPCEVIDSCTVAVASNSTPEGVRYISSNVCGPHG
KCKSQAGGKFTCECNKGFTGTYCHENINDCESNPCKNGGTCIDGINSYKCICSDGWEGTY
CETNINDCSKNPCHNGGTCRDLVNDFFCECKNGWKGKTCHSRESQCDEATCNNGGTCYDE
GDTFKCMCPAGWEGATCNIARNSSCLPNPCHNGGTCVVSGDSFTCVCKEGWEGPTCTQNT
NDCSPHPCYNSGTCVDGENWYRCECAPGFAGPDCRININECQSSPCAFGATCIDEINGYR
CICPPGRSGPGCQEVTGRPCITSVRVMPDGTKWDDDCNTCQCLNGKVTCSKVWCGPRPCV
LHAKGPSECPAGHACVPVRDDHCFTHPCAAVGECWPSNQQPVRTKCNSDSYYQDNCANIT
FTFNKEMMAPGLTTEHVCSELRNLNILKNISVEYSIYITCEPSHLANNEIHVAISAEDIG
EDENPIKDITDKIIDLVSKRDGNNTLIAAVAEVRVQRRPAKSKTDFLVPLLSSVLTVAWI
CCLVTVFYWCIRKRRKQSSHTHTASDDNTTNNVREQLNQIKNPIEKHGANTVPIKDYENK
NSKIAKIRTHNSEVEEDDMDKHQQKARFAKQPAYTLVDRDEKPPNSTPTKHPNWTNKQDN
RDLESAQSLNRMEYIV
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgcgccccggcgggcagccgcggcggcgtgctccatcctcaccctgctcctggcg
ctgcgggcccaggtgactttagcgtcaggacagttcgagttggagatcttatccatgcaa
aatgtgaatggtgaactgcaaaatggaaattgctgcgatggcacccgaaacccaggagat
aaaaaatgcaccagagacgagtgtgacacctattttaaagtttgcctgaaggagtatcaa
tcgcgggtcaccgctggcggtccttgcagcttcggatccaaatccactcctgtcatcgga
ggaaataccttcaatttaaagtacaaccggaataatgaaaagaaccggatcgttatcccc
ttcagcttcgcctggccgagatcctacacattgcttgttgaggcgtgggattacaatgat
aactccacaaaccccgaccgcattattgagaaggcttcccactctggcatgatcaatccc
agccgccagtggcagacgctcaaacacaacgccggagttgcccacttcgagtaccagatc
cgcgtgacatgtgcagaacattactatggctttggctgcaacaagttctgccgacccaga
gatgacttcttcacgcaccacacttgtgaccagaacggcaacaagacctgcttggaaggc
tggatgggaccagagtgcaacaaagctatttgtcgtcagggatgtagccccaagcatggt
tcttgcacaattccaggagagtgcaggtgtcagtatggatggcaaggccagtactgtgat
aagtgcattccacacccgggatgtgtccatggcacttgcattgaaccatggcagtgcctc
tgtgaaaccaactggggtgggcagctctgtgacaaagatctgaactactgtggaacccac
ccgccctgtttgaatggtggtacttgcagcaacactggccctgacaaataccaatgttcc
tgccctgagggctactcgggacagaactgtgaaattgcggaacacgcctgcctctccgac
ccttgtcacaacgggggaagctgcctcgagacatccacgggatttgaatgtgtgtgtgct
cctggctgggctggaccaacttgcactgataatattgatgattgttctccaaatccctgt
ggtcatggaggaacttgccaagatctagttgatggatttaagtgtatttgcccaccccag
tggactggcaaaacgtgccagctagatgccaatgaatgtgagggcaagccctgtgtcaat
gccaactcctgcaggaatctgattggcagctactactgtgactgcattactggctggtct
ggccacaactgtgatataaatattaatgattgtcgtggacaatgtcagaatggaggatcc
tgtcgggacttggttaatggttatcggtgtatctgttcacctggctatgcaggagatcac
tgtgagaaagacatcaatgaatgtgcaagtaacccttgcatgaatgggggtcactgccag
gatgaaatcaatggattccaatgtctgtgtcccgctggtttctcaggaaacctctgtcag
ctggacatagattattgtgagccaaatccgtgccagaacggcgcccagtgcttcaatctt
gccatggactatttctgtaactgccccgaggattatgaagggaagaactgctcccacctg
aaggatcactgccgcaccacgccgtgtgaagtaattgacagctgcacagtggcggtggct
tccaacagcacacccgaaggggttcgctacatctcttccaatgtttgtggtcctcatggg
aagtgcaagagccaagcaggtggaaaattcacctgtgaatgcaacaaaggattcactggc
acctactgtcatgagaatatcaatgactgtgaaagcaacccctgtaaaaatggtggcact
tgcattgatggcatcaactcctacaaatgtatttgtagtgatggatgggaaggaacatat
tgtgaaacaaatattaatgactgcagtaaaaacccttgccacaatggaggaacttgccga
gacttggtcaacgacttcttctgtgaatgtaaaaatgggtggaaaggaaaaacttgccac
tcccgtgagagccagtgtgatgaggcgacatgcaacaacggggggacgtgctatgacgag
ggggacactttcaagtgcatgtgtcctgcaggatgggaaggagccacttgtaacatagcg
aggaacagcagctgcctaccaaacccctgtcacaacggtggtacctgtgtagtcagcggg
gactcgttcacttgtgtctgcaaggagggctgggaaggacccacatgcacccagaacaca
aacgactgcagtcctcatccttgttacaacagcggcacttgtgtggatggagagaactgg
taccgctgtgagtgtgctccaggcttcgccgggcccgactgcaggatcaacatcaatgaa
tgccagtcttcgccctgtgcctttggagccacatgcatagatgaaattaatgggtaccgt
tgcatttgccccccgggtcgcagtggtccaggatgccaagaagttacaggtaggccttgc
attaccagtgttcgagtcatgccagatggaactaagtgggatgacgactgcaatacctgt
cagtgtctgaacggaaaagtcacctgttctaaggtctggtgtggccctcggccttgtgtc
ctgcatgccaagggccccagcgagtgccccgctggccacgcctgtgtccctgtgcgggac
gaccattgcttcacccacccgtgtgccgccgtgggggaatgctggccctccaaccagcaa
cctgtgaggaccaagtgcaactcagattcctactaccaggacaactgtgccaacatcacc
ttcacctttaacaaagaaatgatggccccgggccttaccacagagcatgtttgcagtgaa
ttgaggaatctgaatattctgaagaatatttctgttgaatattccatctatattacctgt
gagccttcccacttggcaaataatgaaatccatgttgctatttctgcagaagacatcggg
gaggatgaaaaccccatcaaagacatcacagataagatcatcgacctcgtcagtaagcgc
gatgggaacaacaccctcatcgctgctgtcgccgaagtcagggtgcagcggcggccggcc
aagagcaaaacggatttcctggtgcccttgctcagctcggtgctgacagtagcctggatc
tgttgcctggtcaccgtcttttactggtgcatccgaaagcggcgaaagcagagcagccac
acccacacggcctctgatgacaacaccaccaacaacgtaagggagcagctgaaccagatc
aaaaaccccattgagaaacatggcgcaaatactgtccccattaaagactatgaaaacaaa
aactctaaaatcgccaaaataaggacacacaactccgaggtggaggaggatgacatggac
aagcaccagcagaaggcccgatttgccaagcaaccagcctacactttggtagacagagat
gaaaaaccccccaacagcacccctacaaaacacccaaactggacaaataaacaggacaac
agagacttggaaagtgcacaaagcctaaatcggatggagtacatcgtatag
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integrated database retrieval system
