Taeniopygia guttata (zebra finch): 100218275
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Entry
100218275 CDS
T01082
Symbol
RAD54B
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100218275 (RAD54B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tgu03400
]
100218275 (RAD54B)
DNA repair and recombination proteins [BR:
tgu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
100218275 (RAD54B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
AAA_34
Motif
Other DBs
NCBI-GeneID:
100218275
NCBI-ProteinID:
XP_002200063
Ensembl:
ENSTGUG00000011880
UniProt:
H0ZNR8
LinkDB
All DBs
Position
2:complement(129221826..129283792)
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AA seq
919 aa
AA seq
DB search
MRRSAAPSQVLGNAGKKPRFIPPGKCTAVCPKNETKEMDQEIKSKEIDEKEGGASLLSKI
SIQNQNENFTQSMGSTGKIKTKACFSIDKCSKAEKKTLTVPKADALYLPTSGTAKEEAAQ
EAPDCLVKYFSVVWCKASKKKHKKWEGDAILITKGKSVILKDMEGKDIGRGTGYKAKELD
SLDEGQTLMVGGKEIEVMGVISADDFSSGRCFQAGIGTHETDATALSQTNTKPFCKPFKN
VCQPSPKENTLRYSQSCKPRHDPNATNAVVMPRPNASHQWMFNKAGLPVVDVVVDPYIAN
NLRPHQKEGIIFLYECVMGMRVSGRFGAILADEMGLGKTLQCIALVWTLLRQGPYGCKPV
LKRALVVTPGSLVKNWKKEFQKWLGNERIKIFAVDQDHKVEEFISSPLYSVMIISYEMLL
RSSDQIEAVEFNLLICDEGHRLKNSTIKTTTALTSLSCERRIILTGTPIQNDLQEFYALI
EFVNPGILGSLSTYRKIYEEPIVRSREPSATEEEKELGEKRAAELTRLTGLFILRRTQEV
INKFLPPKKESIIFCRPTALQLELYRKLLGSRVITSCLQGRLENSPHLICIGALKKLCNH
PCLLFKAIKEKSCDPMSEEYDESSLYEGVIDVFPQDYTSDTFCETDSGKLQVLVKLLAAI
HELNSSERVVLVSNYTQTLNVLQDVCKHYGYSYTRLDGHTPVSQRQHIVDTFNSKFSPAF
IFLLSSKAGGVGLNLVGASHLILYDIDWNPATDIQAMARVWRDGQKHSVHIYRLLTTGSI
EEKIYQRQISKQDLSGAVVDLSKTSEHTHFSIEELKNLFTLHEDSSCVTHDLLECDCMGK
VDHQNTSSEKPPLSRSCQLEQNHGKPNSKKPLSMSQLMQWKHFSGQHQPLADPFLERIKE
NVSFIFQNVTSPTSPPNKT
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgatctgcagctcccagtcaagtcctaggaaatgctggcaaaaagccaaggttt
ataccaccaggaaaatgtactgctgtttgtcccaagaatgaaactaaggagatggaccaa
gaaattaagtcgaaggagatagatgagaaagagggaggtgcttcattgctatctaaaata
agtatccagaatcaaaatgaaaattttacacagtctatggggtcaactggaaaaataaag
acaaaagcatgtttcagcattgacaagtgtagcaaggcagaaaagaaaacactaactgtg
cccaaagctgatgcactgtatttgccaacatcagggactgcaaaggaagaagcagctcag
gaagcacctgactgccttgtgaaatatttcagtgtcgtgtggtgtaaggcatcaaagaaa
aagcacaagaagtgggaaggcgatgctattcttattacaaaaggaaagtcagtaatattg
aaagatatggaaggcaaagacattggcagaggtactggatataaagctaaagagctagac
agccttgatgaaggtcaaacactgatggttggcggaaaagaaattgaagtgatgggtgta
atttcagcagatgatttcagcagtggcaggtgttttcaggctggaatagggactcatgaa
acagatgcaactgcattatctcaaactaatacaaaaccattctgtaaaccattcaaaaat
gtctgtcaacctagtcctaaagagaatacactcagatattctcaaagctgcaaacctcgc
catgatccaaatgctacaaatgctgtggttatgccccggccaaatgcaagtcatcagtgg
atgttcaataaggctggtttacccgtggtggatgtagttgtagatccttacattgcaaat
aatctccgcccacatcagaaagaaggaattatatttctatatgaatgtgtaatgggaatg
agagtcagtggcaggtttggagctattctggctgatgagatgggcttaggaaaaaccctg
cagtgcattgcacttgtctggactcttctgcgtcaagggccctacggatgcaaacctgta
ctaaagcgagcactggtcgtcacccctgggagtctggtgaaaaactggaaaaaagaattt
caaaaatggctgggaaatgaaaggatcaaaatctttgcagttgatcaggaccacaaagta
gaagaattcatcagttctccactttattctgtaatgataatcagttatgagatgctgttg
cgatcttcagatcaaattgaggctgtagaatttaacctcctaatctgtgatgaaggacat
cgtctgaaaaatagcactattaagacaactacagcccttacgagtctgtcttgtgagagg
agaattatcctcactggtactccaatccaaaatgacttgcaagaattttatgcattaata
gagtttgtgaatccaggaatacttggttctttatccacgtatagaaagatatatgaggaa
ccaattgtcagatctagagaaccttcagcaacagaggaggaaaaggaattaggagaaaaa
agagcagctgaactcactcgcctcactggactctttattctaagaagaacacaggaggtt
ataaacaaatttctgccccccaaaaaggagagcataattttctgccgaccaacagcactg
caacttgaattgtatcgcaaactgcttggttctcgtgttattacatcgtgtctgcaaggc
aggctggaaaatagtccccacctaatatgtataggggctctgaaaaaactttgcaatcat
ccatgccttctgtttaaagctataaaggaaaaaagttgtgatcctatgtctgaggaatat
gatgagtccagcctctatgaaggtgtaatagatgtcttcccacaagattatacttcagac
actttctgtgaaactgattcaggaaaattgcaggtgctggtgaagttgttggcagcaatc
catgagctcaactcttctgaaagagtcgtgttggtatcaaattacactcagacattaaat
gtattacaagatgtgtgcaaacattatggatactcctatactagacttgatggacatact
cctgtctcccagagacaacatattgtggatactttcaatagtaaattcagcccagctttt
atctttttgctgagttcaaaggctggtggagtgggactgaacctggttggagcatctcat
ttgatcctgtatgatatcgactggaatccagctacagatattcaggcaatggctagagtg
tggagagatggtcagaaacattctgtccatatctacaggctgctaaccacaggttcaata
gaagaaaagatttaccaaagacagatcagcaaacaagacctttctggggcagttgtagac
ctttccaagacatctgaacacacacatttttctattgaggagcttaaaaatctctttact
ctacatgaagattccagctgtgttactcatgacttgcttgagtgtgactgtatgggaaag
gttgaccatcaaaatacttcttcagaaaagcctcccttatctagaagctgccagcttgaa
caaaaccatgggaagcctaattcaaagaaaccactttccatgtcacagttgatgcaatgg
aagcatttctctgggcaacatcagcctcttgctgatcctttccttgaaaggataaaagaa
aatgtttctttcattttccagaatgtaaccagtcctacttccccacctaataaaacctga
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