Taeniopygia guttata (zebra finch): 100218352
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Entry
100218352 CDS
T01082
Symbol
NFKB2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04010
MAPK signaling pathway
tgu04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tgu03000
]
100218352 (NFKB2)
Transcription factors [BR:
tgu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
100218352 (NFKB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
100218352
NCBI-ProteinID:
XP_030131822
Ensembl:
ENSTGUG00000007491
LinkDB
All DBs
Position
6:15765207..15776194
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AA seq
935 aa
AA seq
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MAMLGLNGLLRPASSSPAGGRPRADMDEQFQPCLDGIDYDDFSFGSHMMEQKEPLMETVE
GPYLVIIEQPKQRGFRFRYGCEGPSHGGLPGASSEKGRKTYPTVKICNYTGMARIEVDLV
THSDPPRVHAHSLVGKQCNEAGNCVTIVGPKDMTAQFSNLGVLHVTKKNMMEIMKEKLKQ
QKMRNRSRLLTEVELREIELEAKELKKVMDLSIVRLRFTAYLRDSSGNFTLALQPVISDP
IHDSKSPGASNLKISRMDKTAGSVRGGDEVYLLCDKVQKDDIEVRFYEDDENGWQAFGDF
SPTDVHKQYAIVFRTPPYHKPKIDRPVTVFLQLKRKRGGDVSDSKQFTYYPVVEDKEEVE
RKRKKVLPQFPQHFGGGSHMGGAGGGAGGFGSGGGGNLSFPYSSGLTYNSIYSPGPHPVG
SYQGGVQMKGPEAEGPESDRQAPAEESTYCKELQKHAQLCQLWMLALARRNAHALLDYSV
TADPRMLLAVQRHLAASQDENGDTPLHLAIIHEQTAVIKQLIDIIVSIPHQQIINISNNL
QQTSLHLAVITKQPQVVQLLLQAHADPTLLDRYGNSLLHLALQTGDEEMLRTLLAHLGSA
APYLLCLPNFHGLLPVHLAVKAKSLACLDLLVRTGADVNAVERQSGRTPLHLAVDMENLN
MATHLVKKLGADINSRNFAGNTPLHLAAGLGSPTLTKLLLKAGADVLCENDEPLSLSSSE
ASSDTDTDPEEQEVAMDLGEPALAAEHSTSSKLSTQGHWQAGHRQRRCHTSLDLTRSHKV
REILLQASQQGPEAELPTAPQPGKVLSLDSEALQGLEQLLNQDCSGSDWIELAKRLGLCS
LVETYKDTPSPSVSLLRSYELAGGSLGGLLEALDSMGLHNAVRMLHKTEALEKLQSTELK
EDSAYGSESVEEEQAPTLALKPRGELPPSQQPQVH
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgctggggctgaacgggttgctgagaccagcctcttcctccccggccggcggc
cggccccgcgccgacatggacgagcagttccagccctgcctggatgggattgactatgat
gacttcagttttggctcccacatgatggagcagaaggagcccctcatggagacagtggaa
ggtccctaccttgtcattattgagcagccaaagcagcggggtttccgatttcggtatggc
tgcgagggcccttcccatggggggctgccaggagcatccagtgagaaggggcgcaagacc
tatcccaccgtcaagatctgtaactacacagggatggcccggattgaggtagacctggtg
acacacagtgaccctccccgtgtacatgcccacagcctggtgggcaagcaatgcaacgag
gccggcaactgtgtcacaatcgtgggacccaaggacatgactgctcagttcagcaacctg
ggtgtgctccatgtcaccaagaagaatatgatggagatcatgaaggaaaagctgaaacag
cagaagatgcgcaacaggagccgtctgctgacggaagtggagctgcgtgagatcgagctg
gaggcaaaggagctgaagaaggtcatggacctgagcattgtgcggttgcgcttcaccgcc
tacctccgtgacagcagtgggaacttcacactggctctccagcctgtcatctcggacccc
atccatgacagcaagtcccctggagcttccaacctgaagatctcacggatggataagaca
gcaggctctgtacggggaggagatgaagtctacttgctgtgtgataaagttcagaaagat
gacatcgaggtgcgtttctatgaggatgatgagaatggctggcaggcctttggggacttt
tctcctacagatgtgcacaagcagtatgccattgtcttccgcacaccgccctaccacaag
cccaagatcgaccgtcctgtcaccgtcttcctgcagctgaagcggaagcgaggaggggac
gtgagtgactccaagcagttcacctactaccccgtggtggaagataaggaagaagtggag
aggaagcgcaagaaagtcctgcctcagtttcctcagcactttggcggtggctcgcacatg
gggggggccggcgggggggctgggggctttggctctggaggaggtgggaacctcagcttc
ccatactcctctgggctgacctacaacagcatctactcgcccggcccccacccagtgggg
agctaccaggggggtgtgcagatgaagggccccgaggcagaggggcctgagagcgacagg
caggcgcctgcagaagagagcacgtactgcaaggagctgcagaaacacgcccagctgtgc
cagctgtggatgctggcgttagcccgtcgcaatgcccatgccctgctcgactactcggtc
accgccgacccccgcatgctgctggcagtccagaggcacctggccgcctcacaggatgag
aacggagacacgcctttgcaccttgctattatccatgaacagacagctgtgatcaagcag
ctgattgacatcattgttagcatcccccaccagcagatcatcaacatctccaataacctg
caacagacgtcactgcatctggcagtcatcaccaagcagccccaggtagtccagctcctg
ctgcaagcccacgccgacccaaccttgctggaccgctatggcaactccctgctgcacctg
gcactccagactggcgatgaagagatgctgaggacgctgctggctcacctgggctcagct
gccccatatctgctctgcctgcccaatttccatggcctcctgcctgtgcatttggctgtg
aaggcaaagagtctggcttgcttggatctgctggtcaggacgggagcagatgtgaatgca
gtggagaggcaaagtgggaggaccccactgcacctggctgtggacatggagaacctgaat
atggccacccacctggtgaagaagctgggagcagacatcaacagccggaatttcgccggg
aacacccccctgcacttggctgctggtctgggctcccccaccctcaccaagctgctcctt
aaagctggggcagatgttttgtgtgagaacgacgagcccttgagcctgtcctcgtcggag
gccagtagtgacacagacactgaccctgaggaacaggaggtggccatggatctgggggag
ccagccctggctgcagagcacagcaccagctccaagctctctacacaggggcactggcag
gcagggcacaggcagcgccgctgccacacatccctggacctgactcggagccacaaggtg
cgggagatcctgctgcaggcctcccagcaggggcctgaggcagaactgcccactgccccc
cagccagggaaggtcctgtcactggacagtgaggcactgcaggggctggagcagctgctg
aaccaggactgcagtgggtcagactggatcgagctggccaaacgcctggggctctgcagc
ctcgtggagacctacaaggacacaccctcgcccagtgtcagcctcctgcgcagttatgag
ctggcaggtggcagcctggggggactgctggaggcactggactccatggggctccacaat
gctgtgaggatgctccacaaaaccgaggcactggagaagctgcaaagcacagagctgaag
gaagacagtgcctacggcagtgagtcggtggaggaggagcaagcgcccacactagccctg
aagccaaggggtgagctgccccccagccagcagccacaggtgcactga
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