Taeniopygia guttata (zebra finch): 100218409
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Entry
100218409 CDS
T01082
Symbol
SEC31B
Name
(RefSeq) protein transport protein Sec31B isoform X1
KO
K14005
protein transport protein SEC31
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100218409 (SEC31B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tgu04131
]
100218409 (SEC31B)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
tgu02044
]
100218409 (SEC31B)
Membrane trafficking [BR:
tgu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
100218409 (SEC31B)
Secretion system [BR:
tgu02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
100218409 (SEC31B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_EML
WDR55
EIF3I
Beta-prop_WDR35_TULP_N
TPR_Sec16
MIOS_WD40
Beta-prop_HPS5
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_DCAF12
Prp18
Motif
Other DBs
NCBI-GeneID:
100218409
NCBI-ProteinID:
XP_030131838
Ensembl:
ENSTGUG00000007660
LinkDB
All DBs
Position
6:16302453..16337499
Genome browser
AA seq
1215 aa
AA seq
DB search
MKLKEIERTAVQAWSPANNHPIYIATGTSAQQLDASFSTNATLEIFEVDFRDPSLDMKQK
GVLPASNRFHKLIWGNFGNGSAECSGVIIGGGDNGVLTMYSVHRILASKGDPVMARTEKH
SGPVRALDFNPFQSNLLASGANDSEIFIWDLNNFSVPMTPGTKSQPHEDISVVSWNRQVQ
HILSSAHPSGKAVVWDLRKNEPIIKVSDHSNRMHCSGMAWHPEVATQLVLSSEDDRLPVI
QIWDLRFATSPLSQLEGHTRGVLSVSWCQADPELLLSSAKDNRILCWNPSLGEVVYELPI
RSQWCFDVQWCPRNPSVFSAATFDGWINIYSVMGGNLEAQQKTQADKISSSFNNLDPFGT
GQSLPPLQVPEQVTQTTLIPPLKKPPKWIRRPVGVSFAFGGKLITFGLTKAPGQQMQQTY
PHQVFISQVTTETEFLLRSKELQMALQSGNLLDYCQGKIQTAKLPFEENLWNFLKVNLEQ
EARTKLLKLLGYSKEDLQKKIASCLSNGIPDKQPLPEAGDTNAAPDQLLMNSSDDVAAVS
SSSAFFDNLIPQNMSTLEIPVTEDTDGLISQALLLGNFEGAVELCMRAERFADAIILAIA
GGDNLLKETQKRYFAKRKTNLSVLLSCIVQQNWQDIVCMCDLQSWKEALAILLTYSKHED
YIHLCDMLGARLESEGDAALSNDACLCYISSGNVERLVECWVKNHETSSPLALQDLIEKV
MVLSRSTEMLRDTAGPAPGPVLAERITQYANLLASQGCLAAAMNYLPSSSKELLIEQLRD
RLFHAQGENVGNQQPPPFPYTRVNVGVVKPTAAKGGSVLEGAAHKAGPRHPEKPNYPSSF
APSAPSQPSVPSLFTPQPVPAMSVTPHHVAPPQASTGPQTSVYSSGHPYPQYNLGLNPAP
VSGPAVSQSQPFGPLGVRPVGPAPFSSQPSLPGQLMPMTSPGVPAPRPALFTPASVPSSQ
LPAACPLPVASQSPLDFSSPPFSCPMNMGYPQGGPGAPSTKPLPAAIPPPPTGFFPWLDP
HTDHAAQESWSDPSTGRGGLQKKKLSEKFTPLAPITTPVMGVPAEPQGIHPQLSRLQESG
QSPPGAPKEGSLQYHQLPREVIEKKELPPEHQALKATFEGLVRRCSAVATDPKTRRKLED
ALQRLECLYEKLREQTLSPAILMGLHEIAQCIEAKNYPQGLLVHTQVVSSSSFSEVSGFM
PILKVLMTIAGKLNV
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgaagctaaaagaaattgagagaacagctgtgcaggcatggagtccggcaaacaaccac
cctatttacatagcaacaggaacatctgcccaacagctggatgcatccttcagtacaaat
gccaccttggaaatatttgaagttgacttcagggatccctccctggacatgaagcagaaa
ggagtacttcctgcctcaaacaggtttcataagctgatctgggggaactttggaaatgga
tctgcagagtgctctggagtgatcattggtggaggggataacggagtgctgacaatgtac
agcgtgcaccgcatcttggcttcgaagggcgatcctgtcatggcgcgcacagagaagcat
tcgggtcctgttcgagcccttgacttcaacccttttcagagtaatctcttggcttccgga
gccaatgattctgaaattttcatctgggacttgaataatttcagtgtgcctatgactccg
gggactaaatcacagccgcatgaagacatcagtgtggtgtcctggaatcggcaagtgcag
catatcctgtcctccgctcaccccagcggcaaggctgtggtttgggacctcaggaagaat
gagcccatcatcaaagtcagtgaccacagcaacagaatgcattgctcaggaatggcctgg
catccagaagttgcaacccagttagtcctttcctctgaggatgaccgtttgccagtgatc
caaatatgggacttgcgctttgctacctcgcctcttagccagctggaagggcacaccagg
ggagttctctctgtttcttggtgccaggctgaccctgaactgctgttgagtagtgccaaa
gacaaccggatcttgtgctggaacccaagtctgggggaggtggtgtacgagttgcccatt
cggagtcagtggtgctttgatgtccagtggtgtcctaggaatccttcagtcttctctgct
gccacttttgatgggtggatcaacatttattctgttatgggtgggaacttagaagctcag
cagaagacacaggctgacaagatctcttcctccttcaacaacctggatccctttggcaca
ggacagagccttcctcctctgcaggtgccagagcaagtaactcagaccaccttgattcca
ccattaaaaaagccacccaagtggattcgcagacctgtgggggtttcatttgcatttgga
ggaaaactgattacctttggtcttaccaaagctcctggacagcaaatgcagcagacttac
ccacaccaggtattcatcagtcaagtcactactgaaactgaattcctactccgatccaag
gaactgcagatggctttgcagtcagggaacctccttgattactgccagggcaagatccag
acagccaagctgccatttgaggagaacctttggaacttcttgaaggtgaatttggagcag
gaggcaaggactaaacttctcaagctgctgggctacagtaaagaggatctgcaaaaaaag
attgcctcatgtttgagtaatgggatcccagataaacagccccttcctgaggcaggtgat
acaaatgctgcaccagatcagcttttgatgaattccagcgatgacgtagctgctgtttct
tcctcttcagccttttttgataacctcatcccacagaatatgagcacattggagattcct
gtcacagaagatacagatggactcatcagccaggcccttttgttggggaattttgagggt
gcagtggagctgtgcatgcgagcagagcgctttgctgatgccatcatcttagctatagct
ggtggggataacctcctaaaggaaacccagaagcgctactttgccaagcggaaaacaaat
ctctccgtgctgctttcctgcattgtgcagcagaactggcaagatattgtttgcatgtgt
gatttacagagctggaaggaggcactggccatcttgttaacatactcaaagcacgaagac
tacattcatctctgtgacatgctgggtgcccgcctggagtcagagggagatgcagccctg
tccaatgatgcctgcctctgctatatctcatcaggcaatgtggagaggctggtggaatgc
tgggtgaaaaaccatgagacttcatcaccccttgccctacaggatcttatagaaaaggtg
atggtgctgagcaggtccactgagatgctccgagacacagcaggaccagcaccaggccct
gtcttggcagaacgaatcacccagtatgccaatctgctggcatcacaaggatgcttggca
gctgcaatgaattacctacccagcagctctaaagagctcctgattgaacagctccgagac
cggctctttcatgctcaaggagagaatgtgggtaatcagcagccacccccttttccgtac
actcgtgtcaatgtaggggtcgttaaacccacagcagccaagggtggttccgtccttgaa
ggagcagcccacaaagcaggtcccaggcatccagagaagcccaactatccatcatccttt
gccccttcagcaccatctcagccttcagtgccttccctcttcacacctcagccagtgcca
gcgatgtctgtgacacctcaccatgttgccccaccccaggccagcacgggtccacaaacg
agtgtctattccagtgggcacccatatccacagtacaacttgggcttgaatccagctcct
gtctcagggccagctgtatcacagtctcagccatttggaccattgggagttagacctgtt
ggtcctgctcctttctccagccagccctctctgccaggacagctgatgcccatgacatct
cctggtgttccagcacccagacctgccctcttcactccagcctcagtcccatcatctcag
cttcctgcagcctgccctctccctgtggcaagccagtctcctctagacttctcttcacca
cctttcagctgccccatgaacatgggttatcctcagggaggtcctggagctccatctact
aaaccactgccagcagccattcctcctcctcccacaggtttcttcccttggctagatccc
cacacggatcatgcagctcaggaatcctggagtgacccctctactggaagaggaggcctt
caaaagaaaaagttgtccgagaaatttactcctctggcccccatcacaactccagtaatg
ggtgtgcctgctgaaccccaagggatccatcctcagctatccaggttgcaagaatctggc
cagtcacccccaggagcacccaaggaaggcagtctacagtatcaccagctacctcgggaa
gtcattgagaagaaagagctgccccctgagcaccaggctttgaaggctacctttgaaggg
ttggtgcgacgctgctcggctgttgccactgatccaaaaacgcgaaggaagctggaggac
gcgctgcagcggctggagtgtttgtatgagaagctgcgcgagcagacgctctctccagcc
atcctcatgggtctccacgaaattgcccaatgcattgaggctaagaactacccacagggt
ctcctggttcacacccaagttgtgagcagcagcagtttcagtgaggtgtctggtttcatg
cccatcctgaaagtcctcatgaccatagcaggcaagctgaatgtgtaa
DBGET
integrated database retrieval system
