KEGG   Taeniopygia guttata (zebra finch): 100218409
Entry
100218409         CDS       T01082                                 
Symbol
SEC31B
Name
(RefSeq) protein transport protein Sec31B isoform X1
  KO
K14005  protein transport protein SEC31
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    100218409 (SEC31B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tgu04131]
    100218409 (SEC31B)
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tgu02044]
    100218409 (SEC31B)
Membrane trafficking [BR:tgu04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    100218409 (SEC31B)
Secretion system [BR:tgu02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   100218409 (SEC31B)
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_EML_2 WD40 Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_EML WDR55 EIF3I Beta-prop_WDR35_TULP_N TPR_Sec16 MIOS_WD40 Beta-prop_HPS5 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_DCAF12 Prp18
Other DBs
NCBI-GeneID: 100218409
NCBI-ProteinID: XP_030131838
Ensembl: ENSTGUG00000007660
LinkDB
Position
6:16302453..16337499
AA seq 1215 aa
MKLKEIERTAVQAWSPANNHPIYIATGTSAQQLDASFSTNATLEIFEVDFRDPSLDMKQK
GVLPASNRFHKLIWGNFGNGSAECSGVIIGGGDNGVLTMYSVHRILASKGDPVMARTEKH
SGPVRALDFNPFQSNLLASGANDSEIFIWDLNNFSVPMTPGTKSQPHEDISVVSWNRQVQ
HILSSAHPSGKAVVWDLRKNEPIIKVSDHSNRMHCSGMAWHPEVATQLVLSSEDDRLPVI
QIWDLRFATSPLSQLEGHTRGVLSVSWCQADPELLLSSAKDNRILCWNPSLGEVVYELPI
RSQWCFDVQWCPRNPSVFSAATFDGWINIYSVMGGNLEAQQKTQADKISSSFNNLDPFGT
GQSLPPLQVPEQVTQTTLIPPLKKPPKWIRRPVGVSFAFGGKLITFGLTKAPGQQMQQTY
PHQVFISQVTTETEFLLRSKELQMALQSGNLLDYCQGKIQTAKLPFEENLWNFLKVNLEQ
EARTKLLKLLGYSKEDLQKKIASCLSNGIPDKQPLPEAGDTNAAPDQLLMNSSDDVAAVS
SSSAFFDNLIPQNMSTLEIPVTEDTDGLISQALLLGNFEGAVELCMRAERFADAIILAIA
GGDNLLKETQKRYFAKRKTNLSVLLSCIVQQNWQDIVCMCDLQSWKEALAILLTYSKHED
YIHLCDMLGARLESEGDAALSNDACLCYISSGNVERLVECWVKNHETSSPLALQDLIEKV
MVLSRSTEMLRDTAGPAPGPVLAERITQYANLLASQGCLAAAMNYLPSSSKELLIEQLRD
RLFHAQGENVGNQQPPPFPYTRVNVGVVKPTAAKGGSVLEGAAHKAGPRHPEKPNYPSSF
APSAPSQPSVPSLFTPQPVPAMSVTPHHVAPPQASTGPQTSVYSSGHPYPQYNLGLNPAP
VSGPAVSQSQPFGPLGVRPVGPAPFSSQPSLPGQLMPMTSPGVPAPRPALFTPASVPSSQ
LPAACPLPVASQSPLDFSSPPFSCPMNMGYPQGGPGAPSTKPLPAAIPPPPTGFFPWLDP
HTDHAAQESWSDPSTGRGGLQKKKLSEKFTPLAPITTPVMGVPAEPQGIHPQLSRLQESG
QSPPGAPKEGSLQYHQLPREVIEKKELPPEHQALKATFEGLVRRCSAVATDPKTRRKLED
ALQRLECLYEKLREQTLSPAILMGLHEIAQCIEAKNYPQGLLVHTQVVSSSSFSEVSGFM
PILKVLMTIAGKLNV
NT seq 3648 nt   +upstreamnt  +downstreamnt
atgaagctaaaagaaattgagagaacagctgtgcaggcatggagtccggcaaacaaccac
cctatttacatagcaacaggaacatctgcccaacagctggatgcatccttcagtacaaat
gccaccttggaaatatttgaagttgacttcagggatccctccctggacatgaagcagaaa
ggagtacttcctgcctcaaacaggtttcataagctgatctgggggaactttggaaatgga
tctgcagagtgctctggagtgatcattggtggaggggataacggagtgctgacaatgtac
agcgtgcaccgcatcttggcttcgaagggcgatcctgtcatggcgcgcacagagaagcat
tcgggtcctgttcgagcccttgacttcaacccttttcagagtaatctcttggcttccgga
gccaatgattctgaaattttcatctgggacttgaataatttcagtgtgcctatgactccg
gggactaaatcacagccgcatgaagacatcagtgtggtgtcctggaatcggcaagtgcag
catatcctgtcctccgctcaccccagcggcaaggctgtggtttgggacctcaggaagaat
gagcccatcatcaaagtcagtgaccacagcaacagaatgcattgctcaggaatggcctgg
catccagaagttgcaacccagttagtcctttcctctgaggatgaccgtttgccagtgatc
caaatatgggacttgcgctttgctacctcgcctcttagccagctggaagggcacaccagg
ggagttctctctgtttcttggtgccaggctgaccctgaactgctgttgagtagtgccaaa
gacaaccggatcttgtgctggaacccaagtctgggggaggtggtgtacgagttgcccatt
cggagtcagtggtgctttgatgtccagtggtgtcctaggaatccttcagtcttctctgct
gccacttttgatgggtggatcaacatttattctgttatgggtgggaacttagaagctcag
cagaagacacaggctgacaagatctcttcctccttcaacaacctggatccctttggcaca
ggacagagccttcctcctctgcaggtgccagagcaagtaactcagaccaccttgattcca
ccattaaaaaagccacccaagtggattcgcagacctgtgggggtttcatttgcatttgga
ggaaaactgattacctttggtcttaccaaagctcctggacagcaaatgcagcagacttac
ccacaccaggtattcatcagtcaagtcactactgaaactgaattcctactccgatccaag
gaactgcagatggctttgcagtcagggaacctccttgattactgccagggcaagatccag
acagccaagctgccatttgaggagaacctttggaacttcttgaaggtgaatttggagcag
gaggcaaggactaaacttctcaagctgctgggctacagtaaagaggatctgcaaaaaaag
attgcctcatgtttgagtaatgggatcccagataaacagccccttcctgaggcaggtgat
acaaatgctgcaccagatcagcttttgatgaattccagcgatgacgtagctgctgtttct
tcctcttcagccttttttgataacctcatcccacagaatatgagcacattggagattcct
gtcacagaagatacagatggactcatcagccaggcccttttgttggggaattttgagggt
gcagtggagctgtgcatgcgagcagagcgctttgctgatgccatcatcttagctatagct
ggtggggataacctcctaaaggaaacccagaagcgctactttgccaagcggaaaacaaat
ctctccgtgctgctttcctgcattgtgcagcagaactggcaagatattgtttgcatgtgt
gatttacagagctggaaggaggcactggccatcttgttaacatactcaaagcacgaagac
tacattcatctctgtgacatgctgggtgcccgcctggagtcagagggagatgcagccctg
tccaatgatgcctgcctctgctatatctcatcaggcaatgtggagaggctggtggaatgc
tgggtgaaaaaccatgagacttcatcaccccttgccctacaggatcttatagaaaaggtg
atggtgctgagcaggtccactgagatgctccgagacacagcaggaccagcaccaggccct
gtcttggcagaacgaatcacccagtatgccaatctgctggcatcacaaggatgcttggca
gctgcaatgaattacctacccagcagctctaaagagctcctgattgaacagctccgagac
cggctctttcatgctcaaggagagaatgtgggtaatcagcagccacccccttttccgtac
actcgtgtcaatgtaggggtcgttaaacccacagcagccaagggtggttccgtccttgaa
ggagcagcccacaaagcaggtcccaggcatccagagaagcccaactatccatcatccttt
gccccttcagcaccatctcagccttcagtgccttccctcttcacacctcagccagtgcca
gcgatgtctgtgacacctcaccatgttgccccaccccaggccagcacgggtccacaaacg
agtgtctattccagtgggcacccatatccacagtacaacttgggcttgaatccagctcct
gtctcagggccagctgtatcacagtctcagccatttggaccattgggagttagacctgtt
ggtcctgctcctttctccagccagccctctctgccaggacagctgatgcccatgacatct
cctggtgttccagcacccagacctgccctcttcactccagcctcagtcccatcatctcag
cttcctgcagcctgccctctccctgtggcaagccagtctcctctagacttctcttcacca
cctttcagctgccccatgaacatgggttatcctcagggaggtcctggagctccatctact
aaaccactgccagcagccattcctcctcctcccacaggtttcttcccttggctagatccc
cacacggatcatgcagctcaggaatcctggagtgacccctctactggaagaggaggcctt
caaaagaaaaagttgtccgagaaatttactcctctggcccccatcacaactccagtaatg
ggtgtgcctgctgaaccccaagggatccatcctcagctatccaggttgcaagaatctggc
cagtcacccccaggagcacccaaggaaggcagtctacagtatcaccagctacctcgggaa
gtcattgagaagaaagagctgccccctgagcaccaggctttgaaggctacctttgaaggg
ttggtgcgacgctgctcggctgttgccactgatccaaaaacgcgaaggaagctggaggac
gcgctgcagcggctggagtgtttgtatgagaagctgcgcgagcagacgctctctccagcc
atcctcatgggtctccacgaaattgcccaatgcattgaggctaagaactacccacagggt
ctcctggttcacacccaagttgtgagcagcagcagtttcagtgaggtgtctggtttcatg
cccatcctgaaagtcctcatgaccatagcaggcaagctgaatgtgtaa

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