Taeniopygia guttata (zebra finch): 100218505
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Entry
100218505 CDS
T01082
Symbol
HSPD1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100218505 (HSPD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgu03019
]
100218505 (HSPD1)
03110 Chaperones and folding catalysts [BR:
tgu03110
]
100218505 (HSPD1)
03029 Mitochondrial biogenesis [BR:
tgu03029
]
100218505 (HSPD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tgu04147
]
100218505 (HSPD1)
Enzymes [BR:
tgu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
100218505 (HSPD1)
Messenger RNA biogenesis [BR:
tgu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
100218505 (HSPD1)
Chaperones and folding catalysts [BR:
tgu03110
]
Heat shock proteins
HSP60 / Chaperonin
100218505 (HSPD1)
Mitochondrial biogenesis [BR:
tgu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
100218505 (HSPD1)
Exosome [BR:
tgu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100218505 (HSPD1)
Exosomal proteins of other body fluids (saliva and urine)
100218505 (HSPD1)
Exosomal proteins of breast cancer cells
100218505 (HSPD1)
Exosomal proteins of colorectal cancer cells
100218505 (HSPD1)
Exosomal proteins of bladder cancer cells
100218505 (HSPD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
100218505
NCBI-ProteinID:
XP_002192336
Ensembl:
ENSTGUG00000010538
UniProt:
H0ZJV4
LinkDB
All DBs
Position
7:22640072..22650293
Genome browser
AA seq
573 aa
AA seq
DB search
MLRLSTVLRQIRPVSRSLAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKAIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFEKISKGANPVEIRRGVMLAVDAITAELKKLSKPVTTPEEIAQVATISANGDQ
EIGNIISDAMKKVGRKGVITVKDGKTLNDELEIIEGMKFDRGYISPYFINTTKGQKCEFQ
DAYVLISEKKISSVQSIVPALEIANANRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLKDMAIATGGAVFGEEGLNLNVEDIQPHDFGKVGEVIVTKDDTMLLKG
KGEKTQIEKRIQEIIEQLEVTTSEYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRCIPALDALTPANEDQRIGIEIIKRTLRIPAMTIA
KNAGVEGSLIVEKILQSPSEVGYDAMLGDFVNMVEKGIIDPTKVVRTALMDAAGVASLLS
TAEAVVTEVPKEEKEPAMGGMGGMGGGMGGGMF
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgctccgtttatctacagtactccgtcagataagaccagtgtccagatccctcgccccc
catctaacacgagcctatgcaaaagatgtgaaattcggagcagacgcgagagctctgatg
ctgcaaggagtagatcttttagcagatgctgtagctgtcaccatggggccaaagggaaga
acagttattattgaacaaagctggggaagtcccaaagtgacaaaagatggtgtgacagta
gcaaaggcaattgacttgaaagacaaatacaaaaacataggagccaagttagttcaagat
gttgccaacaataccaatgaagaagcaggagacggtaccactactgcaacagtccttgca
cgagctattgccaaggaaggctttgagaagatcagcaaaggagccaatccagtagaaatc
aggaggggggtgatgctggcagtggatgccatcacagctgaactgaagaaactgtcaaaa
cctgttacaactcccgaggaaattgcacaggttgccacaatatcagcaaatggagatcag
gaaattggcaatataatctctgatgcaatgaaaaaagttggacgaaagggtgtgatcact
gtcaaggatggaaaaactttaaatgatgaactggaaatcattgagggtatgaaatttgac
agaggctacatctctccatattttattaacacaactaaagggcagaaatgtgaattccag
gacgcttatgttttaatcagcgaaaagaaaatctctagtgtacagtccatagttccagct
cttgaaattgccaatgccaaccgcaaacctttggtcatcattgctgaagatgttgatgga
gaagccctcagtactctagtcttaaacagactgaaggttggccttcaggttgttgctgta
aaagcaccaggttttggtgacaacaggaaaaaccaacttaaggacatggcaattgctact
ggtggtgctgtgtttggagaagaaggtttgaacctaaatgtggaagatattcagcctcat
gactttggtaaagttggagaggtcattgtgacaaaagatgacaccatgctccttaagggg
aagggtgaaaagactcagattgaaaaacgcattcaagaaataatcgaacagctagaggtt
accaccagtgaatatgaaaaagagaaactgaatgagcgattggccaaactctctgatgga
gtagcagtattgaaggtgggtggaacgagcgatgttgaggtgaacgagaagaaggacagg
gtgaccgatgccctgaacgccacccgtgcggccgtggaggaaggcatcgtcccaggtggt
ggctgtgccctgctgcgctgcatcccagccttagatgccttaactccagccaacgaggat
cagagaattggcattgaaataatcaagagaacactgagaatcccggcaatgactattgca
aagaatgctggtgtcgaaggatcattgatagttgaaaaaatcctgcagagcccatcagaa
gttggctacgatgcaatgcttggggactttgtaaatatggtagaaaaaggaattatagac
ccaactaaggttgtgagaactgctctgatggatgctgcaggtgttgcatctctcctatca
acagcagaagcagtggtgactgaagttcctaaagaagaaaaggagccagcaatgggagga
atgggtgggatgggtggaggaatgggaggtggcatgttctaa
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