Taeniopygia guttata (zebra finch): 100218569
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Entry
100218569 CDS
T01082
Symbol
LRRTM1
Name
(RefSeq) leucine-rich repeat transmembrane neuronal protein 1
KO
K16665
leucine-rich repeat transmembrane neuronal protein 1/2
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
100218569 (LRRTM1)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_9
LRR_NXF1-5
LRRNT
LRR_12
UL97
HemY_N
Motif
Other DBs
NCBI-GeneID:
100218569
NCBI-ProteinID:
XP_002188501
Ensembl:
ENSTGUG00000010929
LinkDB
All DBs
Position
4:complement(3760815..3763753)
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AA seq
520 aa
AA seq
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MDFLLIGLCLNWLLRKPPGLILCTLGIFSKMLPAVNSGCPQLCRCEGRLLYCESLNLTEM
PRNLSGMMGLSLRYNSLSELHDGQFTGLMQLTWLYLDHNHICSVEGNAFQKLRRVKELTL
SSNKITQLPNTTFRPMPNLRSVDLSYNNLQSLEPDLFHGLRKLTTLHMRSNAIKFVPVRI
FQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNLAHFPRLISLHSLCL
RRNKVTIVVNTLDWIWQLEKMDLSGNEIEYIEPHVFESVPHLKSLQLDSNRLTYIDSRVL
DSWKSLTSISLSANAWDCSRNVCALASWLSNFQGRYDSNLLCATPEYAQGEDVLDAVYAF
HLCEDADPTSVNTFSPVTNNSEQTLGYGSATATYDAPDGDEDRTTYAVTITMPGENSENA
VQIHKVVTGTMALIFSFLIVVLVLYVSWKCFPAGLRQLRQCFVTQRRKQKQKQTMHQMAA
MSAQEYYVDYKPNHIEGALVIINEYGSCSCHQQPARECEV
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggatttccttcttattggtctctgtttaaactggctgctgaggaagcccccggggttg
atattgtgtacgctgggtatcttttctaaaatgcttccagctgtgaatagtgggtgtcca
cagctctgtcggtgtgagggcaggcttttgtactgtgaatcactgaatctcacagagatg
cctcgcaacctgtcgggcatgatgggcttgtctctgcggtacaacagcctttcagagctg
catgatggacagttcacagggttaatgcagctcacgtggctctatctggatcacaatcac
atttgctcagtggaggggaatgcctttcaaaaattgcggcgagttaaggagctcaccctg
agttccaacaaaataacccaactgcccaacaccactttccgccccatgccaaacttgcgc
agtgtggatttatcatacaacaacctgcagtctttggagcctgacctgttccacgggctg
agaaaactgacaactttgcacatgcggtcgaacgccatcaagttcgtgccagtgagaatt
tttcaggactgtcgcagcctgaagtttctagacataggatacaatcagttaaagagcctg
gctcgaaactcttttgctggcttgttcaaactcactgagctgcacctcgagcacaatgac
ttggtgaaagtgaatttagcccattttcccaggctcatctccctgcactccctctgcttg
cgaaggaataaagttaccatcgtagtaaacactttggactggatatggcaactcgaaaag
atggatctctccggcaacgaaatcgaatacatcgaacctcacgttttcgaaagtgtacct
catctcaaatccctgcagctggactccaaccggctgacctacatcgactcccgagtcctc
gactcctggaagtccctcacgagcatcagcctctccgccaatgcctgggattgcagccgg
aacgtctgcgccctggcctcatggctgagcaacttccagggtcgctacgacagcaacctg
ctctgtgccacccccgagtacgcccagggagaggatgttttggacgctgtctacgccttc
cacttgtgcgaggacgccgaccccacgagtgtcaacaccttctccccggtgaccaacaac
agcgagcagacgctgggctatggctcggccaccgccacctacgacgcgcccgacggcgac
gaggaccggaccacgtacgccgtcaccatcaccatgcccggcgagaactccgagaacgcc
gtgcagattcacaaggtggtgacgggcaccatggcactgattttttccttcctcatcgtg
gttttggtgttgtacgtctcctggaagtgcttcccagccggcttaaggcaactgagacag
tgctttgtcacacagcgcaggaagcagaagcaaaaacagaccatgcaccaaatggctgcc
atgtcagcccaggagtattacgttgattacaaacccaaccacattgagggagccctggtg
atcattaatgagtacggatcttgctcctgtcaccagcagccagcgagggaatgcgaggtg
tga
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