Taeniopygia guttata (zebra finch): 100218673
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Entry
100218673 CDS
T01082
Symbol
ZC3H13
Name
(RefSeq) zinc finger CCCH domain-containing protein 13 isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgu03019
]
100218673 (ZC3H13)
Messenger RNA biogenesis [BR:
tgu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
100218673 (ZC3H13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_DUS3L
zf-CCCH_2
zf-CCCH_4
zf-CCCH_PAN3
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
100218673
NCBI-ProteinID:
XP_030128208
Ensembl:
ENSTGUG00000012299
LinkDB
All DBs
Position
1:complement(58364816..58410979)
Genome browser
AA seq
1642 aa
AA seq
DB search
MSKIRRKVTVENTKTISDSTSRRPSVFERLGPSTGSTAETQCRNWLKTGNCLYGNTCRFV
HGPSPRGKGYSSSYRRSPERPTGDLRERMKNKRQDVEAEPQKRSTEESSSPVRKESSRGR
HREKEDIKITKERTPESEEENGDWETNREDSDNGDVNYDYDHELSLEMKRQKIQRELMKL
EQENMEKREEIVIKKEISPEVVRSKLSPSPRKSSKSPKRRSSPKSSSSASKKDKKASTVS
SPLLEQQRSSKSTQSKKKGPRTPSPPPPVQEETPLGKKHKEKHKAKERSEEKTRDVKERG
RDFERHKEKKEKQRDPSESSRRQKRSPSPADHSGSNSSPSREYSPPAARRKQTSRAPAKS
TTHKHNFSPSRRSASPSGQRHSPISSRHHSSSSQSGSSVQRHSPSPHRKRTPSPSYQRTA
SPPARRSSSPYPPHSSSPPQRKRSPSRHRSPGRDKGRHDRDRTSQSHDRRHERRDETRGK
REKERETRDDRDYDQEQSTSRDHRDDRESRDGRDRRDTRDTRDRREPRESRDTRDSRDTR
DYSRDAKDSRDQRDSRSTRDSHDYRDRESRDAHKKDDQYQDDLRSYGRSHGREESSRAET
RNDSRSDSRNESRSDRIGRSRGRGPELSDKGSRGTRGSQADGHSSSGNYHDSWDSRSSYA
DRDRYDSRDQARDSSFERRHSERDRRDNRERDQRASSPVRHQGRSDDLERDERREERRVD
RSDDRRDERARERERERERDRERERERDREREREKERELERDRARERERDRERDKDRDRE
RDRDRDHDREREREREKEREREREERERERERERDRERERERERGRDRDKERDRQRDWDD
KDKGREDRRDKREDIREERGSRDVHEERKSKKRHRNESSPSPRQSPKRRRDHSPDSDAYN
SGDDKNEKHRLLSQVVRPQESRSLSPSHVTEERQSRWKEEDRKSDRKESSRRYEEPEFKE
RVSSADKQREQPDASEGSRSRVQENLGHHPSEERDASDRMHDDNKKKSKIQKKATKKKKD
DDSGVEKYANEPATEESQVFSPKKGQKRKNVEKKRKRSKGDSEVSDEEIVPHHKKKKGPR
TPPVTKEELVEAPPEKAVAEVPTKREDTTFSDWSDEDVPERGDIVVPERTTEDSHRKSHR
TRVEKVEAPHVTIEDGPHRKPVDQKRSSSLGSNRSHASSRLRSPSNESAHRSGDDQTARK
RILHSSSRDRDRDREKKSLEITERKSRIDQLKRGEPSRSTSSDRQDSRSHSSRRSSPESD
RQVHSRSGSFDSRERLQERDRHEHDRERERDRREGRQRDWDRDVDKDWPRSRERERLRER
ERDREKRRELERERDRQLPDPAERERERTLDSSSQKESTKHSETKLDRDHEKEFDGVCRD
SVASEKEKTDKDLGSLQGFEDGNEAEKVESLEGGEDETKTNDVQSLGSGAGEYEPISDDE
LDEILAGDAEKREDQQEDEKMPGKNPVDVIDVDWSSLMPKQPKEPREPGAALLKFTPGAV
MLRVGISKRLAGPELFTKIKETCQRVLEKPKDAEDLFEHELGALNMAALRRKEERAGLLS
NLGPCCKALCFRRDSAIRKQLMKNEKGATKQTYTNSAAMDSDLLRLSLRLFKRKTVCQVP
GQEKTEDSKIPQPALQQEVCVT
NT seq
4929 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaattagaaggaaggtcacagtggaaaataccaagaccatatccgatagcaca
tcccgaagacccagtgtgtttgaaaggcttggacccagcactggaagtactgcagagaca
cagtgccgtaactggctgaagactggcaactgcctctatgggaacacatgtagattcgta
catggcccttcaccacgaggtaaaggctatagcagcagttatagaaggtcaccagaaaga
cccactggagatcttcgggaaagaatgaagaacaaacgtcaagatgttgaggcagagcca
cagaaacgaagtacagaggaatcatcctctcctgttaggaaagagtcttcacggggaaga
catagagaaaaggaggatatcaaaattacaaaggagcgaacaccagaaagcgaagaggaa
aatggggattgggaaacaaacagagaagactctgataatggagatgttaattatgattat
gatcatgagctgtctttggaaatgaagcgccaaaagattcagagagaactcatgaaattg
gaacaggaaaacatggagaaacgagaggaaatagtaattaaaaaggagatttctccagag
gtggttagatctaaattatcaccatcaccacggaagtccagcaaatctccaaaacgaaga
tccagtcccaaatcatcatcttcagctagtaagaaagacaagaaagcatctactgtctct
tcaccacttttggagcagcagaggagttctaaaagtacccagagtaaaaagaaaggtcct
cgtacccctagccctcctcctccagtacaagaggaaactcccctggggaaaaaacacaaa
gaaaaacataaagcaaaagaacgttcagaagaaaagacaagggacgtgaaagagagaggg
cgtgactttgaaaggcacaaggaaaaaaaagagaagcagagggatccatctgaaagctcc
cgtagacagaaacggtctcctagtcctgcagatcactctggcagtaattcttccccttcc
agggagtactcaccacctgctgcaaggcgaaagcaaacctcccgagctccagccaagtca
accactcacaaacataatttctcaccctctcgcaggtctgcttctccatcaggtcagcgt
cattctcccatatcctccagacatcactcctcgtcctcacagtcaggctcgtctgttcaa
agacattctccttccccacaccgcaaaagaactccttctccatcctatcaaaggacagct
tccccgcctgcaaggcggtcatcttccccctatcccccacactcttcctctccacctcag
aggaaaagaagtccttcgagacaccgatctcctggaagagacaagggaagacacgatcgt
gataggacttcacagtctcatgacaggcgccacgaaaggcgggatgaaacaagagggaaa
agagaaaaagaaagagaaacaagagatgatcgtgattatgaccaagagcagagtacctcc
agggaccacagggatgacagagagtctcgtgatggaagagatcggagggacacgagagac
accagagatcggcgggagccacgagaatccagagatactcgagactccagagacacccgg
gattatagcagggatgccaaagacagtcgtgaccagagagactcacgctccacacgagac
tcccatgactacagagacagagagagtcgtgatgcccataaaaaggatgaccagtatcag
gatgacttgcgcagctatggaagatcccatggcagagaggagagctctcgtgctgaaaca
aggaatgactccagaagtgactctagaaatgagagcagaagtgatagaattggcagaagt
cgaggcagaggtccagaattatctgacaaaggaagtcgggggactagaggatcccaagct
gatggtcacagcagtagtggaaactaccacgacagctgggactcgaggagtagctacgct
gatcgggatcgctatgacagtcgggatcaagcaagggattcctcctttgaaagaagacat
agtgaacgggataggcgtgacaacagagaaagagatcagagagcaagctcaccagtacgg
caccaaggacggagtgatgatctcgagcgggatgagaggagagaggagcgaagggtggat
cggtctgatgacagaagagatgaaagggcccgggagagagagcgggaaagggagagggac
cgagagagagaaagagaaagagaccgggaaagagagagggaaaaagaaagagagttggaa
cgagatcgtgctcgggaacgggagagggacagagagcgggacaaagacagggaccgtgaa
cgggaccgagacagagaccatgacagggaaagggaacgagagagggagaaagaacgggag
cgagagcgggaggaacgggaaagggagcgagaacgagagagagatcgagagcgggagcgc
gaaagggagaggggtcgagacagagacaaagaaagagaccgccagagagactgggatgac
aaagacaaaggaagggaagatcgcagggacaagagagaagatattcgagaagaaagaggc
tcaagagatgtccacgaggaaagaaaatccaagaagcgtcacagaaatgaaagcagtcca
agtccccgtcagtcacccaaacgtcgccgtgatcattctcctgatagtgatgcttacaac
agtggagatgataaaaatgaaaagcacagactcctgagccaggttgtgcggccacaggaa
tcccggtcactcagcccctctcatgtcacggaggagcggcagagccgctggaaagaagaa
gatcgaaaatcagacagaaaggaaagttcccggcgctatgaagaaccagagtttaaagag
agggtttcttcagcagataagcaaagagagcagccagatgcttcagaaggttcccggtcc
agggttcaggaaaatcttggacaccatccttctgaagaaagagatgcttctgatagaatg
catgatgacaacaagaagaagtctaagatacagaaaaaggccacaaagaagaagaaagat
gatgacagtggggtggaaaagtatgctaatgaaccagcaactgaggaaagccaggtcttt
tcccctaagaaaggtcaaaaaaggaaaaatgtggagaaaaagcgtaagagatccaagggt
gattctgaagtttctgacgaagaaattgttccacatcataaaaagaaaaaaggcccaaga
acccctcctgtaactaaagaagaattggttgaagcaccacctgagaaagcagtggcagaa
gtccctacaaaaagagaagatacaacatttagtgactggtcagatgaagatgttcctgaa
cgtggcgacattgttgttccagaaagaaccaccgaggattcccatagaaaaagtcacagg
acgagggtagaaaaggtggaagcccctcatgttacaatagaggatggaccacaccgtaag
cctgtggaccagaagcgcagcagcagcctcggtagcaatcggagccatgcctccagcagg
cttagatccccctccaatgagtcagcacatcgcagtggagacgatcagaccgcacggaaa
aggatcctgcacagtagctctagggatagggacagggacagggagaagaaaagcttagaa
atcactgaaaggaagtcccgaattgatcagttgaaacgaggggaacccagtcgcagcaca
tcttcagatcgtcaagattcaagaagccacagttcaagaagaagctcccccgagtcagat
cgtcaggtccattccagatctgggtcctttgatagcagggaaaggcttcaggagcgagat
cgacatgaacatgatcgagaacgagagagagacaggagagaggggagacagagggactgg
gaccgagatgtggacaaagactggccaaggagccgggagcgagagagactcagggagcga
gagagggatagggagaaaagacgggagctggagagagagagagaccgacagctgcctgat
cctgctgaaagagagagagagagaactcttgacagctcttctcaaaaggaatcaacaaag
cacagtgaaacaaaactggacagagatcacgaaaaagagtttgatggtgtttgccgggac
tcagtggcttctgagaaggagaaaacagacaaagatttaggatctttacaaggctttgaa
gatggaaatgaggctgaaaaagtagagagtctagaaggaggagaggatgaaacaaagact
aatgatgtgcagtcactggggtctggtgctggagaatacgagcctatcagtgatgatgaa
ctggatgaaattctggcaggtgatgctgaaaagcgtgaggatcaacaggaggatgagaag
atgcctggtaaaaatccagtggatgttatagatgtagactggtccagtcttatgccaaag
cagccaaaagaaccacgtgagcctggggctgcgcttctaaaattcacaccaggtgctgtt
atgttgagagttggcatttccaagcgattggcaggaccagagctcttcaccaaaataaaa
gagacatgccagagggtcttagaaaaacctaaagacgcagaagacctttttgaacacgaa
ctgggagcacttaacatggctgcacttcggcgaaaagaagagagagcaggtcttctcagc
aatctgggtccttgctgcaaagcgctgtgcttccgcagggattctgcaattcgtaagcag
ctcatgaagaatgaaaagggtgcaacaaaacaaacttacacaaattctgcagcaatggac
agcgacttgttacggttgagtctacggttattcaaacgaaagactgtgtgccaagttcct
gggcaggaaaagacagaggacagcaaaattccacagccagctctccagcaggaagtgtgt
gtgacttga
DBGET
integrated database retrieval system
