Taeniopygia guttata (zebra finch): 100218972
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Entry
100218972 CDS
T01082
Symbol
ZBED1
Name
(RefSeq) zinc finger BED domain-containing protein 1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tgu03000
]
100218972 (ZBED1)
04121 Ubiquitin system [BR:
tgu04121
]
100218972 (ZBED1)
Transcription factors [BR:
tgu03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
100218972 (ZBED1)
Ubiquitin system [BR:
tgu04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
100218972 (ZBED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
hAT-like_RNase-H
PRRSV-NSP11_N
Motif
Other DBs
NCBI-GeneID:
100218972
NCBI-ProteinID:
XP_030132960
UniProt:
A0A674H5H4
LinkDB
All DBs
Position
1:79881754..79894604
Genome browser
AA seq
695 aa
AA seq
DB search
MENKSLEGSPSDLKLVAHPRAKSKVWKYFGFDTNAEGCILQWKKIYCRICMAQIAYSGNT
SNLSYHLEKNHPDEFCEFVKSNTEQMREAFATAFSKIKPESSQQVVQDSLIMKTYQNYEN
KKHQELTSAVISLICEGMYPASIVDEPTFKALLRTADPRYELPSRKYFCTKAIPEKYSAI
REIVLKELTEVLWCGISTDMWRSENQNRSYVTVAVHFLSSGPANCLAVNSRCLKTFEVPE
DNTAETITRVLYETFIEWGINTKVFGATTDYSKDIVKACSLLDIPVQMPCLGHSFNAGIQ
QAFQLPKLCNLLARCRKLVEYFQQSTVAMYMLSEKQKQQNILHCMLVSDRVSWWGSTLAM
LQRLKEQQFVIAAVLVEDSNNHHLMLESSEWNTIEGLVELLQPFKQVAEMMSASKYPTIS
MVKPLLHMLLNTTLNIKENDLKEISMAKEVIAKELSTTYQHTPEIDMFLNVATFLDPRYK
KLPFLSAFERQQVENRVVEEAKSLLEKVKENSFRTEEKFFTVSEEPPMKKIIISSTPPPT
SVINNMLAEIFCQTGGVEDQEEWHAQILEELSNFKSQKVLGLNEDPLKWWSDRLALFPVL
PKVLQKYWCILATRVFPERLFGSSANVVSAKRNRLAPAHVDEQIFLYENSRNGSEAEPED
EDEGEWGLEQEQIFNLNDSVNINNSFFNIRDSGFV
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggagaataaaagtttagaaggttccccatcagacctaaagttagtggctcacccgaga
gcaaagagtaaagtgtggaagtactttgggtttgataccaatgcagaaggatgcatatta
cagtggaagaagatctactgccgtatttgcatggcacagattgcctattcgggaaataca
tccaacctttcctaccaccttgagaaaaaccaccctgatgaattctgtgagtttgtgaaa
agtaacactgagcaaatgagggaagcctttgccacagcattttcaaaaatcaagccggag
tcatcgcagcaggttgttcaagatagcctcatcatgaagacctaccagaactacgaaaac
aaaaaacatcaggaactgacatctgcagtcatcagcttaatttgcgagggcatgtatcca
gcctccattgttgatgaacctaccttcaaggccctcttgagaacagcggaccccaggtat
gaacttccaagccggaagtacttctgtacaaaagcgattcctgaaaagtacagtgctatt
agagaaattgtgctgaaagagctcactgaggttctgtggtgtggcatatccacagatatg
tggaggagtgaaaaccagaacaggtcatatgtaactgtggcagttcactttctcagcagc
ggtcctgccaactgcctggctgtgaactcacggtgtttgaaaacattcgaagtaccagag
gataacactgcagagaccattacacgagttctttacgaaacattcattgagtgggggatc
aatacaaaagtctttggtgctacaacagattacagtaaagacattgtaaaggcttgctct
ctcttagatattcccgtacagatgccttgtttgggccactcttttaacgcaggaatacaa
caagcttttcagctccccaaactgtgcaaccttcttgccaggtgccgaaagctggtggag
tattttcagcagtctacagtcgcaatgtacatgctgagtgaaaagcagaagcaacagaat
attctccactgcatgctggtaagtgaccgtgtttcctggtggggaagcacacttgctatg
ctgcagcgcctcaaggagcagcagtttgtcattgcagctgttctcgtggaggacagcaac
aaccaccacctcatgctggaatccagtgagtggaatacaatcgaagggctggtggagctg
ctccagcctttcaagcaggttgcagagatgatgtctgcttcaaagtacccgacgataagt
atggtgaagccacttctccacatgcttctgaataccactctgaacatcaaagagaacgat
ttgaaagaaatcagcatggcaaaggaggtgattgctaaagagttgtcaaccacctaccag
cacacacctgagatagacatgtttctcaatgttgcaactttcttggatccccgctacaaa
aaactgccttttctttcagcctttgagaggcagcaggtggaaaacagagtggtggaagaa
gcaaaaagcctactggagaaagtaaaagaaaatagttttagaactgaggagaaattcttc
actgtttcagaagagccccctatgaaaaaaatcatcatctcctctactcctcctcctacc
agtgtcatcaacaacatgctcgcagagatcttttgccagacaggaggcgtggaagaccag
gaggaatggcatgctcaaatccttgaggagttgagcaacttcaagtcacaaaaggtcctc
ggtttgaatgaagacccgttgaagtggtggtctgacagactagcactgtttccagtttta
ccaaaggttcttcaaaaatactggtgtattctggccacaagggtcttccctgaacgcctt
tttggttcttctgctaatgttgtgagtgcaaagagaaaccggttagccccggctcatgtg
gatgagcagatctttttgtatgaaaacagtcgcaatgggtctgaggcagaaccggaggac
gaagatgaaggagagtggggtttggaacaggaacagatctttaatttaaatgactcggta
aacataaacaacagtttctttaatattcgagacagtgggtttgtttaa
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