Taeniopygia guttata (zebra finch): 100219135
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Entry
100219135 CDS
T01082
Symbol
ZMAT2
Name
(RefSeq) zinc finger matrin-type protein 2
KO
K12848
U4/U6.U5 tri-snRNP component SNU23
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100219135 (ZMAT2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tgu03041
]
100219135 (ZMAT2)
Spliceosome [BR:
tgu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
100219135 (ZMAT2)
Complex C
U4/U6.U5 tri-SnRNP related factors
100219135 (ZMAT2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_jaz
zf-met
SNRNP27
zf-U1
C2H2-zf_KIN17
DUF6277
DUF4250
MG280
Herpes_gp350_A
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
100219135
NCBI-ProteinID:
XP_030139636
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Position
13:7316654..7327745
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AA seq
199 aa
AA seq
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MASGSGTKNLDFRRKWDKDEYEKLAEKRLTEEREKKDGKPAQPVKRELLRHRDYKVDLES
KLGKTIVITKTTPQSEMGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSTLD
QVKKRFEVNKKKMEEKQKDYDFEERMKELREEEEKAKAYKKEKQREKKRRAEEDLTFEED
DEMAAVMGFSGFGSTKKNH
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgggcagcgggaccaagaacctggacttccgccggaagtgggacaaggacgag
tatgagaaactcgcagagaagcggctcacggaggagagagaaaagaaagatggcaaacca
gctcagcctgtcaaaagggaacttctgcggcaccgagactacaaagtggacctggaatcc
aagctggggaaaaccattgtcatcaccaaaactacccctcagtcagagatgggagggtat
tactgtaatgtatgtgactgtgtggtgaaagattccatcaacttcttggatcacatcaat
ggcaaaaaacaccagaggaatctgggcatgtccatgcgggtggagcgttccacactggac
caggtgaagaaacgctttgaggtgaacaagaagaagatggaggagaagcagaaggattat
gactttgaggagaggatgaaggaactccgtgaggaggaggagaaggccaaagcctacaag
aaggagaagcagagagagaagaagaggcgggcggaggaagatttgacctttgaagaggat
gatgaaatggcagctgtgatgggtttctctggttttggctcaaccaaaaagaaccactga
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