Taeniopygia guttata (zebra finch): 100219153
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Entry
100219153 CDS
T01082
Symbol
PKD2
Name
(RefSeq) polycystin-2 isoform X1
KO
K04986
polycystin 2
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tgu03037
]
100219153 (PKD2)
04040 Ion channels [BR:
tgu04040
]
100219153 (PKD2)
Cilium and associated proteins [BR:
tgu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
100219153 (PKD2)
Ion channels [BR:
tgu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100219153 (PKD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_1
EF-hand_7
CNNM
Motif
Other DBs
NCBI-GeneID:
100219153
NCBI-ProteinID:
XP_030127799
Ensembl:
ENSTGUG00000002213
UniProt:
H0YVH7
LinkDB
All DBs
Position
4:61129595..61156123
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AA seq
902 aa
AA seq
DB search
MAGGGGCRRGREQLELERLGQAARPGSRPPSPPLSACSRQAWSRDNPGFEPEEDAAAAAA
AGPVLEMDVEWGSRAASSLGSGAGPAAGGGRRARRGPAGRGGAEGPGRLTGPPDGAAPRR
AAWAKRLARRLRGLWGTRLMEESNTSREQYLKSILRELITYMVFLVVLCVLTYGTVSSSM
YYYTRVMSQLFLETPVSKTEKTDFKTLSTMDDFWKFTEGPLLDGLYWEMWYNNKTMAENK
SFIYYENLLLGVPRIRQLKVRNGSCSIPEDLKEEIKDCYDVYSVANEDTAPFGLRNGTAW
TYTNEKDLNGSSHWGLIATYSGAGYYQDLSRTREVTALQIASLKKNLWLDRGTRATFIDF
SVYNANINLFCVIRLLVEFPATGGLVTSWHFQPVRLIHYISTFDFFLAACEMSFCLFVLY
YMVEEILEIHIHRLRYFRSVWNCLDILIIVLSVVAIGISIYRTSTVDMLLKKLLEDQNSF
PNFEPLAYWQMQFNNIAAVTVFFVWIKLFKFVNFNRTMSQLSTTMSRCVKDVIGFAIMFF
IIFLAYAQLAYLVFGTQIDDFSTFQDCIFTQFRIILGDFNFTEVEEANRILGPIYFTTFV
FFMFFILLNMFLAIINDTFSEVKSDMAQQKAEMELSDLIRKGYNKAMIKLKLKKTTVDDI
SESLRQGGGKLNFDELRQDLKGKGHTDAEIEAIFTKYDQDGDQELTEHEHQQMRDDLEKE
REDLDLDRSSLPRPLSSRSFPRSLDDSEEDEDEDSGHSSRRRGSSSSGVSYEEFQVLMRR
VDRMEHSIGSIVSKIDAVIVKLEAMERAKLKRRDVLGKLLDGVTEDERLGRSSEMHREQM
ERLVREELERWESDDVASQVSHRLGTPLGLNGQPRSRNSRPSSSQSDGVDAGAGSGGTNI
HV
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcggcggcggctgccggcgcggccgggagcagctggagctggagcggctgggg
caggcggcgcggcccggctcccgcccgccgtcgccgccgctttccgcctgctcgcggcag
gcctggagccgggacaacccgggcttcgagcccgaggaggacgcggcagcggcggcggcg
gcggggccggtgctggagatggacgtggagtggggcagccgagccgcgtcgtcgctgggc
agcggcgcggggcccgcggcgggcggcgggcggcgggcgcggcgcgggcccgcggggcgc
ggcggggctgaggggccgggccgcctcacggggccgcccgacggagccgcgccccgccgc
gccgcctgggccaagcgcctggcgcggagactgcgaggtctgtgggggacaagactcatg
gaagagagcaacaccagcagagagcagtacttgaaaagtattttacgggagctgatcaca
tacatggttttccttgtggtcctgtgtgtcttgacttacgggacagtgagttccagtatg
tactattatacaagggttatgtcacagctcttcctggaaacacctgtgtcaaaaacggag
aaaactgacttcaaaactttgtccacaatggatgacttctggaagttcacagaaggccct
ttgctggatggtctttactgggagatgtggtacaacaacaaaaccatggcagaaaacaaa
agcttcatttattatgagaacctgctcctaggagtgcctcgcattcggcagctgaaagtc
agaaatggttcctgctccatacctgaagatttaaaggaggaaatcaaagactgctatgat
gtctattctgtagctaatgaagatactgctccttttggactccggaatggaactgcctgg
acgtacaccaatgagaaggatttgaacggcagcagccactggggcttgattgccacatac
agcggggctggttattaccaagacctctcaaggaccagagaagtgacagctctgcagatt
gctagcctgaagaagaacctgtggctagacagagggaccagagcaaccttcattgatttc
tctgtgtacaatgcaaacatcaacctgttctgcgtgatcaggttgctagtagagtttcca
gctactggaggcctggttacatcttggcactttcagcctgtgaggctgatccattacatc
tccacttttgattttttcctggcagcctgtgaaatgtccttctgtctttttgttctatat
tatatggtggaagagatcttggaaattcacattcatagactgcgctacttcagaagtgtt
tggaattgccttgatatccttatcattgtgctgtctgtagtagctataggaattagcatc
tataggacatcaactgttgatatgctcctgaagaagctgctggaagatcagaactcattc
cccaatttcgaacccttggcatattggcaaatgcagtttaacaacattgctgcagtcact
gtgttttttgtctggattaagcttttcaaatttgttaacttcaacagaacgatgagtcag
ttatccaccacgatgtctcgctgtgtcaaggatgtaattggctttgccattatgtttttt
attattttcttagcttatgctcagttggcctatcttgtcttcggcactcaaattgatgac
ttcagcactttccaggattgcatatttactcagttccgcatcattttgggagacttcaac
ttcacagaggttgaagaagctaatcgaattttgggacccatttatttcactacatttgtg
ttctttatgttcttcattcttttgaacatgtttttggcaattatcaatgataccttctca
gaagtcaaatcagatatggcacaacagaaggcagaaatggaattgtctgaccttatcagg
aagggctacaacaaagccatgatcaaacttaaattgaagaaaactactgttgacgacatt
tcagaaagtctgagacaaggtggaggaaaactcaattttgatgaactccggcaggatctc
aaagggaaggggcacacagatgcagagattgaagcaatatttaccaaatatgatcaagat
ggggaccaggaattgacagaacatgaacatcagcagatgagagatgacctggagaaagag
agggaggatctggacctggataggagctctctaccacgtcctctgagcagccgcagcttc
ccccggagcttggatgactctgaggaggatgaggatgaagacagcggacacagctccagg
aggaggggcagcagctctagtggggtttcctatgaagagttccaagtactcatgaggcgg
gtggatcgcatggagcattccattggcagtattgtctccaagatcgatgctgttatcgtg
aagctggaagccatggagagggccaagctaaaaaggagagatgtgttgggaaagctgtta
gatggagtgacagaggatgaaaggctgggccggagcagtgaaatgcacagggagcagatg
gagcggctggtgcgagaggagctggagcgctgggagtcggacgatgtggcctcccaagtg
agccatcggctgggaacgcccctggggctgaacggccaacctcgctccaggaactcccgc
ccgtcttcttcccagtcagatggcgtcgatgcaggagcgggaagtgggggcaccaacatc
cacgtgtag
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