Taeniopygia guttata (zebra finch): 100219554
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Entry
100219554 CDS
T01082
Symbol
UTP20
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tgu03009
]
100219554 (UTP20)
Ribosome biogenesis [BR:
tgu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
100219554 (UTP20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Motif
Other DBs
NCBI-GeneID:
100219554
NCBI-ProteinID:
XP_030118365
LinkDB
All DBs
Position
1A:45413611..45476293
Genome browser
AA seq
2796 aa
AA seq
DB search
MKSKPTAHKSGNTHRFLTFSERLSNINIDIIHRIDRTGSYAEEVETYFFEGLRKWKELNL
TRHFVQFYNEVANKCQSFNQLVYYQSAIVQSLKTHLQVEGSLAYQPLLNLVVQLARDLQA
DFYPHFHDFFLAITKLLDTQDTELLEWAFTSLSYLYKYLWRLMVKDIHNIYSLYSTLLAH
HKLHIRNFAAESFVFLMRKVSDKNELFNLMLRDLGEHPEKVEGVGQLLFEMCKGVRNMFH
SCAETAMKLILMKLGPMTEEEIELPWVAVGEAFKQMIRSAAVHIHKEHFDIVFKCLEESL
LDLQRKITEVNCTVASEQMERILQAYLILVEHANGSKISLPEDVCQVLIKMLQTPYLSSS
CCKMLLNAISAFLLAENVLLPDSLTKETIQKVFASRFERHFLLDFSEAMFTMKQFERHFL
PCFLEYIEHCFSGTDAITKDEAVAILAKLILVKAEPPTIGSMAFEKYPLVFTEASVSSNT
RQQTSKRQGEKAVVPVLDHVLSLMHLPNKEDITDLSQAWVALVVLPHIRPMNKDHILPHV
TSFIDSLFTAIDKGSLCKGNLFVACQAVSTLLSLVESAEVLHLLPVERVKSLVTTFPSDP
SALLLADLYYTRLALCGCQEPLSQGNLMDLFEKLHPNISTGVSKVRLLTVRILSHFDNPP
SAQIEGDGTGEFQPLFAILLQAELVPATVNDYREKLLHLRKLRCDIVQPAIPSGSLQEVP
LRYLLGMLYINFSPLWDPVIELITSHAKEMENKQFWKVLYEHLERAASYAEMELQDELDE
KEESIGEAESEKIPEGDVGTVFLEQLRSRTDCSERLDHTNYRFLLWKALDKFPDRVEPRS
RELSPLLLRFIRNEYYPADSLVAPSQDLRRKISGTIAAKQIPAEEVNDVAMEEEEEEEEE
EKEEREPFSIGVLKKKTRRAAAKQLIAHLQVFSKFSNPRALYLEQKLHALYTQLLSHQDQ
NVQRIALDCMMTYKHPHLLPYRENLQRLLEDKSFKEEIVHFSISEETTVVKTEHRPDLIP
VLMRILYGRMRNKTGSKTQGKSSASTRMSIVLRFLAGSLPEEIRMFLDLLFEAVKQFSNG
PCQTAVLQSMSELDLAKVLPLGRQHSLFNGLEVVLKNMGHLIQQYLPEILQILLCMTAVV
SCILQQREKVQPRLINPLKNLRRLGLKLVAEFFSDYETYSFSAEEIDAVFHAVVWPQVCR
LASESQYSPTFLLKLIHTWSKNPRYFPLLAKQQPDHPESDILTNVFAVLSAKNLSEATSS
LVMDIADSLLNSPDFEPTEQVSSLNVTDCVVTATGDVTEEPLSLGCRLVLPHVPAILQYF
SKTMLSVEKVKKKKYRAQVSKELSILSKISKFIQEKSQNSVLVSLLLPFLYQTNMEQGTQ
IDILETVQNLLRHCSNPTNFLKPLAKLFSVIQNKLSRNKLCLVFQTLSDLDAKLKYITDV
VKLNAFDQRHLDDIDFDVRLSAFQSITAHIKEMQTVDTDFLIPVMHNCFYTIQLGDMALS
DNASLCLTSFIHQLAEISHTEEEYKELIQHTLLESVRRGLRSKTESIQQDYTSLLSCLIQ
TFPTNPEFQDLVQLTNRHDPDMDFFENMKHMQIHRRARALRKLAKQLTEEKLVLSSKSLQ
NYIMPYATTAIFSEKMLKYENMVTASVEVVGAVCRHLSWSAYLYHLKHFIHVLQTGQIST
KLGVSLLEIVLEAFHFDHKTLEKQLMTIDNQEAAAMDLEPVVEAEETMELEQSEGEEEEV
EEKNGKNLSEKPVEPEQAAEPTENAEQVPKPVSFLPRNKEELQCLIKHIQETVTVNILPK
LHRCIVAKVKRDEEHKLVKSNVVNDDEVVRVPLAFAMVRMMQCLPQEVMEANLPSILLKV
CTFLRNRFQEIRDIARNTLIKIMEVLGVHYLLYILKEMRSALIHGYQLHVLTFTVNLLLK
GLTTRLSAGDLDPCLDILIEIFNQELFGNVAEEKEVKGIVSKIMEARKNKSYDSYEILGK
FIGRSQVTKLILPLKEVLESTTSLKIVRKVHEALRHIMAGLIFNSDMNAESLLLLSHGLI
SENLPLLTEKAKKKAAPPPDPRLQPESCLLLQPTPTRGGQKARVSSRTNTYILVDSGLRL
LHMSLKRSKVNSSEEHALEMLDPFVQLLIDCLKSMDVKVITGALQSLVWILKFPLPSVST
NMESLIKQLFLLLKEFAKTGIAKGQNFHLVVSCFKCVTILVKNAKSQITSKQLQVLLGFA
EEDIYDSSRQATAFGLLKAILSRKLIVPEIDDVLQKVAQLAITGQSEPVRVQCRQIYLKY
LLDYPLGDKLKPNLDFMLAQLEYEYETGRESALEMIAYLLDMFPQDLLHKHCGLFFLSLC
MMMINDDSAKCKKMAALTCKSLLRKISSEKQDLMFSLVTQWFHSKKSSHRRLAAQACGLF
VEVEGVMFERRLAAVLTLIEKEINPSKFENITEEEEEKAADRLLFSFLVLVKKLITECNL
IQLTRNSDVVSSIWDHVQSHLWYPHSWVWLTATEIFGLLFASYKPEDLVNKWKERKSGKR
KKTPAELSASIVFLTAELDKKMKELAFAFCHQLQSKFLDMSLSEQVIKNLLFVAKVVYLL
APASEEGKEADGELRCEVEEQEVSEDERHTSAQGEEEREDTQEKGQPATLLWLMKKLSVM
VKREAAYSPKVPLKRSCIFKFLGAISVDLGQDRIKPYLPTILAPLYRELNSNYAEQDPTL
KNLSQEIIELLKKLVGLEAFSLAFSAVQKQANQKRAMRKKQRALQTVANPDIAARRKLKR
HKNKAETRKRKIESLRPMYKAKRHRSNALKDLAMVE
NT seq
8391 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcaaacccacggcccacaagtcgggcaacacgcaccggtttcttaccttttcg
gagcgcctaagcaacattaatattgatattattcatcgaattgacagaactgggagctat
gctgaggaggttgaaacctactttttcgaaggactgcggaaatggaaggaactgaacctc
actcggcattttgtgcaattctataatgaagtggccaacaaatgccagtccttcaaccag
ctggtttattaccaaagtgctattgtgcagagcttgaagacacatttgcaagtcgaaggc
agtcttgcttaccaacccctattaaatctagtggtgcagttggctcgagatcttcaggct
gatttctatcctcactttcatgactttttcctggccatcaccaagttattggatacacag
gacacggagctgttagaatgggcttttacctctctttcctatctctacaagtacttgtgg
agattgatggtgaaagacatacacaacatatacagcctgtacagcaccctgctggctcac
cacaaactgcacatcagaaactttgctgctgaaagttttgtatttctaatgagaaaggtt
tctgataaaaatgaactcttcaatttaatgctccgtgacctgggagagcaccctgaaaag
gtggaaggtgtaggacagctgctttttgagatgtgcaagggtgttcgaaacatgttccac
tcttgtgcagaaacggctatgaagttaattctgatgaagctggggcctatgactgaagaa
gaaattgagctaccatgggtagctgttggagaagccttcaagcaaatgatcagatcagct
gcagtgcatatccataaggagcattttgacattgtcttcaagtgcctggaggagtcactc
ctagatttgcagaggaaaataacagaggtcaactgcactgtggcttcagagcagatggaa
aggattctgcaagcttatctgatcttagtggaacatgcaaatggatctaaaatctcactg
cctgaagatgtctgtcaggttttaataaaaatgttacagacaccatatctctcatcatct
tgctgcaagatgctgctgaatgccatttctgcattcctgctggcggaaaatgttttgttg
ccagattctttgaccaaggaaactattcagaaggtatttgcaagtagatttgaacggcat
tttcttttggacttctctgaagcaatgttcacaatgaagcaatttgagaggcattttctc
ccatgctttctagaatacattgaacattgcttctctggcacagatgccatcacaaaggat
gaggctgtggcaattctggctaaactcattttggtgaaagcagagcctcctaccattggt
tcaatggcatttgaaaagtatcctcttgttttcactgaagcatctgtcagctctaataca
aggcaacaaacaagtaaaagacaaggagaaaaggcagtagtaccagtgttggatcatgta
ctgtctttaatgcatttaccaaacaaggaggacatcactgacctttcacaggcttgggtt
gctttggttgtactgccacatattagaccaatgaacaaagaccacattctgcctcatgtg
acgagttttatagactctctcttcacagccattgacaaaggaagcctctgcaaaggaaac
ctatttgtggcctgccaagctgtaagtactctacttagtttggtggaatctgctgaagta
ctccatttgttacctgtggagcgtgtcaagagcttggtgaccactttcccttcagacccc
tctgcattgctgttggctgatctctattacacgaggctggcattgtgtggctgccaggaa
cccctttcccagggaaacctaatggatttgtttgagaagttgcatcctaatatttccact
ggtgtttccaaggtccggctgttgacggttcgaattctaagccattttgataatccacct
tctgcacagattgagggtgatggcacaggggaattccagccattatttgccatattgctc
caagcagaacttgtgccagcaacagtgaatgattacagagagaaacttctccatttaagg
aaactaagatgtgacatagtgcagcctgcaataccaagtggatctttgcaggaggtgcct
cttcgatatttactaggaatgctttatatcaacttcagccctctctgggatcctgtaatt
gaactcataacttctcatgcaaaggaaatggagaataaacagttctggaaggtcctgtat
gaacatttggagagggctgctagctatgctgaaatggagctacaagatgaattagatgaa
aaggaggagagcataggtgaagcagaaagtgagaagataccagaaggagatgtggggact
gtctttctggagcagctgaggagtagaacagattgcagtgaacggctggaccacacaaat
taccgtttcctactttggaaagcactggataagtttccagacagagtggaacctcggtcg
agggaactttccccgcttcttttgagattcattcgaaatgagtactacccagcagattcc
ttagtggctccatctcaggatctcagaaggaaaattagtggtaccatagcagcaaaacag
atacccgctgaagaggtgaatgatgttgctatggaggaggaggaggaggaggaagaagaa
gaaaaggaagaaagggaaccatttagtataggagtactgaaaaagaaaacaagaagagct
gctgctaagcaactaatagcccatttacaagttttctcaaaattctcaaatcctcgtgca
ttgtatctggagcagaagttacatgccttgtatacccagttactgtctcatcaagaccag
aatgtacagagaatagcccttgactgtatgatgacatacaagcatcctcatctactgcct
tacagggagaacttgcaaaggctactggaggacaagagctttaaagaagagatagtccat
ttcagtatttctgaggagaccacagtagtaaaaacagagcatcgaccagatctcatccct
gttcttatgagaattctctatggcagaatgagaaacaaaacagggagcaaaacacagggc
aagtcttcagcgagcactcgcatgtcgatcgttctgcgatttctggccggctcgctgcca
gaagagatacggatgttcttggatctactctttgaagctgtgaagcaattcagtaatggg
ccttgccagactgcagtccttcaaagtatgtcagagctggatttagctaaagtcctgcct
cttgggcgtcagcatagcctcttcaatggtcttgaagttgtgttgaaaaacatgggacat
ttgatccagcagtacctgcctgaaattctacagattctactctgcatgactgctgtggta
tcctgcatcctccagcaaagagagaaggtccaacctaggttgattaatccactgaagaat
ttgagacgtcttggtctcaagcttgtggcagagtttttttctgattatgagacctacagc
tttagtgcggaagagattgatgcagttttccatgctgtggtatggcctcaggtctgcaga
ctggcttcagagagtcagtattctccaacttttctgctcaaactcattcacacctggagt
aagaaccccaggtatttccctttgctggccaagcagcagccagatcatccagagagtgat
atactgacaaatgtttttgctgtgctgtcagccaagaatctgtctgaggccacatccagc
cttgtgatggacattgctgatagccttctcaacagcccagattttgaacccacggagcag
gtttccagtctcaacgtgactgactgtgttgtcacggccactggagatgtgacagaagag
cccctcagcttaggttgccggttggtcctgccccatgttcctgccatacttcagtacttc
agcaaaacaatgttaagtgtggagaaggtgaaaaagaagaagtatagagctcaagtcagc
aaagagctgagtatactttccaagatcagcaaattcatacaagaaaagagtcagaattca
gtgcttgtgagccttctcctccctttcctttatcagactaacatggagcagggtacgcaa
attgacattctggagacagtgcagaacttgctgaggcattgctcaaaccctacaaacttt
ctcaaaccactggcaaagcttttttctgtcatccagaacaaactgtctcgaaataagttg
tgcttggtatttcagactttatctgacttggatgctaagttgaagtatattactgatgtt
gttaagctgaatgcctttgatcagcgacatctggatgatattgacttcgatgtgcgtctg
tcagcatttcagtcaatcacagcccacatcaaggaaatgcaaacagtggatactgacttc
ctcatccctgttatgcacaactgcttctataccatccagctcggggatatggctcttagt
gacaacgcaagcctttgtttgaccagtttcatccaccaactggcagaaatcagccacaca
gaagaggagtacaaggagctaatccagcacactctcctggagtctgtgagaaggggtctg
aggagtaagactgagagcatccagcaggactacacatcactgctttcctgcctcattcag
acattcccaacaaatcccgaattccaggatttggtccagctgaccaaccgccatgatcct
gacatggacttctttgagaacatgaaacacatgcagattcacaggagggcacgagctctg
aggaaactggcaaagcagctcactgaagaaaagcttgtgctgtcttctaaatccctccag
aactacatcatgccttatgctacaactgccattttcagtgaaaaaatgcttaagtatgaa
aatatggtaacagcctcagttgaagttgttggagctgtctgccgacatctttcatggtca
gcatatttgtaccacttaaagcatttcatccatgtcttgcaaacaggacagatcagtacg
aagctgggagtcagcttgttagagatagtgctggaagcctttcactttgaccataaaaca
cttgaaaagcagcttatgaccattgacaatcaagaagctgctgccatggaccttgagcca
gtggtggaggctgaagaaaccatggagctggagcagagtgaaggggaagaggaggaagtt
gaagaaaagaatgggaagaatctctctgagaagccagtagaacctgagcaagcagctgag
ccaactgaaaatgctgaacaagtgcccaaacctgtttcgttcttaccccgaaataaagag
gagcttcagtgtctgatcaaacacattcaagaaacagttacagtcaacatcttgcctaaa
ttgcacaggtgtattgttgcaaaggttaaaagagacgaggagcacaagcttgtgaaatcc
aatgttgtgaatgatgatgaggtagttcgtgttccattagcttttgcaatggtcagaatg
atgcagtgtcttccccaggaagtgatggaagctaacctaccaagcatcctactgaaagtc
tgcacattcctgagaaacagatttcaggaaatacgggacattgcccgtaacaccctcatt
aaaatcatggaagtgttgggagtgcactaccttctgtatatcttaaaggagatgcggtct
gcgctcatccatggctaccagctccatgtgctgactttcactgtgaacctgttactgaag
ggccttactaccaggctcagtgctggtgatttggacccctgcttagatatcctgattgag
attttcaaccaagaattgtttgggaatgtagctgaagagaaagaagtgaagggaattgtc
tccaagatcatggaagcacgcaaaaacaagagttatgattcctatgaaattcttgggaag
ttcataggaaggagccaggtgacaaaacttattctgccactgaaggaggttctggagagc
actacaagcttgaagatagtccggaaggtgcatgaggcactgcgtcacatcatggcaggg
ctgatcttcaactcagacatgaatgcagaatccctcctcctcctcagtcatggtctcatc
agtgaaaatttgcctctgctcactgagaaagccaagaaaaaagctgcccctcctccagat
cctcgtctgcaaccggagagctgcctgctactccagcccactcccacaagaggagggcag
aaagcacgtgtcagcagcaggactaacacatatatcctggttgattcaggacttcggcta
ctgcacatgagcctgaagagatccaaagtaaattcctctgaagaacatgctttggaaatg
ttagacccttttgttcagctgcttatagactgcctgaaatctatggatgtcaaggtgata
actggtgctctgcagtccttggtatggattttaaagttccctttgccttctgtcagtacg
aatatggagtcactgatcaagcagcttttcctcttgctgaaagagtttgccaagacagga
atagccaaaggccagaatttccacctggttgtgagctgtttcaaatgtgtaacaatactt
gtgaagaatgcaaagagtcagataacaagcaaacagctccaagtgttgcttggctttgct
gaagaagacatttatgattcatcacgccaagctactgcctttggccttctcaaggctatt
ttatccaggaagctgattgtccctgaaattgatgatgtgctgcagaaggttgcccagcta
gccatcacaggtcagagtgagccagtgcgagtccagtgcaggcagatttatttaaaatac
cttctggattaccctcttggtgacaaactgaaacccaatttggatttcatgctcgcacag
ctggagtatgagtatgaaactgggagggaatctgcactggagatgattgcgtacctcctc
gacatgttcccacaggatctcctgcacaaacactgtgggctattttttctctctctttgt
atgatgatgataaatgatgactcagccaaatgcaaaaagatggcggctttgacatgtaaa
tctcttctccgtaagatcagcagtgaaaaacaagatctgatgttttcgctggtcacacaa
tggtttcacagcaaaaagagctcacacaggaggctggctgcccaggcatgtggtttgttt
gttgaagtggaaggagtaatgtttgaacggcggcttgcagcagtcctcactttgattgaa
aaagaaattaacccaagtaaatttgaaaatataactgaagaagaagaggagaaggctgca
gataggcttctattcagctttcttgtgctggtaaaaaagctaatcacagagtgcaacttg
attcagttaaccaggaacagtgatgttgtgagcagtatttgggatcatgtccagtctcac
ctgtggtatcctcatagctgggtctggctgacagccacggagatctttggtttgttgttt
gcatcttataagccagaagatcttgtcaacaaatggaaggaaagaaagtcagggaagaga
aaaaagacaccagcagagctgtctgcatccatagtcttcttgactgctgaactggacaaa
aagatgaaggaactcgcatttgcattctgccatcagctgcagtccaagttcctggacatg
tctctgagtgagcaggttataaagaatttactttttgtggccaaagttgtttacttgcta
gcccctgcctcagaagaaggtaaagaagcagatggagaactcaggtgtgaagtggaagag
caggaggtctcagaggatgagagacatacttctgctcaaggagaggaagaaagagaggac
acacaagagaaaggccagccagccacactgctgtggttaatgaagaagctttctgtcatg
gtgaagagagaagcagcatattcccctaaggtccctttaaagagaagctgcatctttaag
ttcctgggagcaatctcagtggatctggggcaagacaggatcaagccctaccttccaaca
attctcgctcctctgtacagggagctgaacagcaactatgcagagcaagatccaacacta
aagaacctttcccaagaaatcatagaacttcttaagaagttagtggggctggaggccttt
tcgctggccttttctgctgtgcaaaaacaggccaaccagaaaagagcaatgaggaaaaag
cagagggctttgcagactgtagcaaatcctgacattgctgcaaggaggaagctgaagaga
cacaagaataaagcagaaaccaggaagagaaaaatagaatctctacgccctatgtacaag
gccaagagacatcgaagtaatgcactgaaagatttagcaatggtggaatga
DBGET
integrated database retrieval system
