Taeniopygia guttata (zebra finch): 100219579
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Entry
100219579 CDS
T01082
Symbol
MKRN1
Name
(RefSeq) E3 ubiquitin-protein ligase makorin-1 isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tgu04121
]
100219579 (MKRN1)
Enzymes [BR:
tgu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100219579 (MKRN1)
Ubiquitin system [BR:
tgu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100219579 (MKRN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
Torus
zf-CCCH
zf_CCCH_4
zf-CCCH_DUS3L
zf-CCCH_2
zf-RING_UBOX
zf-C3HC4
zf-CCCH_3
zf-RING_2
zf-RING_5
zf-rbx1
zf-ANAPC11
zf-C3HC4_4
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
100219579
NCBI-ProteinID:
XP_030119185
Ensembl:
ENSTGUG00000011669
UniProt:
A0A674HA52
LinkDB
All DBs
Position
1A:57189711..57210507
Genome browser
AA seq
523 aa
AA seq
DB search
MAEAVAALETTAGAAGAALGSPAAPAGAAAVAFDFAAVPPPSAGPGGGGWTKQVTCRYFM
HGVCKEGDNCRYSHDLSTSQSAMVCRYYQRGCCAYGDHCRYEHTKPLIQEEVTDVNPEAE
IYPSVSSEFASLPETVEEFIAEIEDENTDLAATGVGAEDWVNAVEFVPGQPYCGRGPLHV
LEGCSKVAPEPSLLQAEQPQLSEPFLIGEVFHPSNHLHGPQLAAPFCAEAPLQEMVIEEE
YEKQQADVEMKKELCPYAALGECRYGENCVYIHGDVCDMCGLQVLHPIDAAQRSQHIKSC
IEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCSHTYCLKCIRKWRS
AKQFESKIIKSCPECRITSNFVIPSEYWVEEKEEKQKLIQKYKEAMSNKPCRYFDEGRGS
CPFGGNCFYKHEYPDGRQEEPQRPKVGTSSRYRAQRRNRFWDFIEERENGDPFETDEDEV
VTFELGEMLLMLLAAGGDDELTDSEDEWDLFHDELEDYYDLDL
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcggtggcggcgctggagacaacggcgggcgcggcgggcgcggccctgggg
tcgcccgcggcgcccgcgggagcggcggctgtcgccttcgacttcgcggccgtgccgccg
ccatccgcggggcctgggggaggcggttggaccaagcaggtcacctgcagatacttcatg
catggagtctgcaaggaaggagataactgccgctactcccatgacctctccaccagtcag
tctgccatggtgtgcaggtattaccagcgaggatgctgtgcttatggagatcattgcaga
tatgaacataccaagccactaatacaggaagaagtgactgatgttaacccagaggcagaa
atctatccatcagtatcctcagagttcgcatcactccctgaaacagttgaagaatttatt
gctgagatagaagatgaaaatacagatctggcagcgacaggagtaggggctgaagactgg
gtgaatgcagtggagtttgtccctgggcagccatactgtggacgtggcccgcttcatgtc
ctggaaggttgcagtaaggtcgccccggagccttctcttctccaggcagaacaaccccaa
ctctctgagcctttcctcataggggaggtgttccatccttctaaccatctccatggtcct
caactagctgctcctttctgtgctgaagcacccttgcaggaaatggtgattgaagaagaa
tacgagaagcagcaggcagacgtggagatgaagaaggagctgtgcccctacgctgcatta
ggagaatgtcgttatggagaaaactgcgtgtatatccatggggacgtgtgtgatatgtgt
ggcctgcaggtcttgcatcccattgatgctgcacagagatctcagcacataaagtcttgc
attgaagctcacgagaaggacatggagctttcctttgccgtccagcgtagtaaagacatg
gtgtgcgggatctgcatggaggtggtgtatgagaaagctaatcctagcgagcgccgcttt
gggatcctctccaactgcagccacacttactgtctcaagtgcatccgcaagtggaggagt
gctaaacaatttgagagcaagattataaagtcctgcccagaatgccgcatcacgtctaac
tttgtcattccaagtgagtactgggtggaggagaaggaagagaagcagaaactcattcag
aaatacaaggaggcaatgagcaacaagccatgcaggtattttgatgaaggccgtgggagc
tgtccatttggagggaactgtttttacaagcatgaatatcctgatggccgccaagaggag
ccacaaagacccaaagtaggaacctcaagtagataccgggcccagcggaggaatcggttc
tgggatttcatcgaggagcgagagaatggtgatccctttgaaaccgacgaggatgaggtg
gtgacctttgagcttggtgagatgttgcttatgctgttggcagctggaggtgatgatgag
ctaacggattccgaggatgagtgggacttatttcatgatgagctggaagattattatgat
ttggatctatag
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integrated database retrieval system
