Taeniopygia guttata (zebra finch): 100219639
Help
Entry
100219639 CDS
T01082
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100219639 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tgu03041
]
100219639 (PRPF4)
Spliceosome [BR:
tgu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
100219639 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
PRP4
Beta-prop_EML
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_Vps41
WD_LRWD1
WD40_like
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
100219639
NCBI-ProteinID:
XP_030142191
Ensembl:
ENSTGUG00000002623
UniProt:
H0YWN5
LinkDB
All DBs
Position
17:complement(1320464..1329113)
Genome browser
AA seq
529 aa
AA seq
DB search
MATARAPAARGAARPPEPPKAKPAEEAEAAPAKRAPIFYGSLEEKERERLAKGETGLLAK
EAMKAAMEAGNINISSGEVFDLEDHMSERQAEVLAEFERRKRARQINVSTDDCEVKACLR
ALGEPITLFGEGPAERRERLRNILSVVGTDALKKTRKDDDRSKKSKEEYQQTWYHEGPRS
LKTARLWLANYSLPRAAKRLEEARLLKEVPEATRTSQRQELHKSLRSLNNFCSQIGDDRP
LSYCHFSPNSKLLATACWSGLCKLWSVPDCNLVHTLRGHSTNVGAIVFHPKATVSLDKKD
VSLASCAADGSVKLWNLESDEPVADIEGHSMRVARVMWHPSGRFLGTTCYDHSWRLWDLE
AQEEILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGI
NFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVRFEPNHGNFLLTGAYDNT
AKIWTHPGWSPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKLWTAE
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgcgcgggcaccggcggcgcgcggtgcggcccggccccccgagccccccaag
gccaagcccgccgaggaggccgaggctgccccggccaagcgggcgcccatcttctacggg
agcctggaggagaaggagcgggagcgcctggccaagggcgagacggggctgctggccaag
gaggccatgaaggctgccatggaggccggcaacatcaacatcagcagcggggaggtgttt
gacctggaggaccacatgagcgagcggcaggccgaggtgctggcggagttcgagcgccgc
aagcgcgcccggcagatcaacgtgtccacggacgactgcgaggtcaaggcctgcctgcgg
gccctgggcgagcccatcacgctcttcggagagggtcctgcggagcgcagggagaggtta
aggaacatcctctcggtggtcggcacagacgcattaaaaaagacccggaaagatgatgac
aggtccaaaaagtccaaagaagagtatcagcaaacctggtaccacgagggccctcgcagt
ctgaaaacagccaggctgtggctggccaactactcactccccagggcagcgaagcggctg
gaggaggcccggctgctcaaggaggttcccgaggccaccaggacatcccagaggcaggag
ctgcacaaatccctgcggtccttgaataacttctgcagtcagattggggacgaccgcccg
ctgtcctactgccacttcagccccaactccaaactgctggccacagcctgctggagtggg
ctgtgcaagctctggtctgtgcctgactgcaacctggttcacaccttacgaggacacagc
accaacgtgggggcaatcgtgttccaccccaaggccacggtgtccctggacaagaaggat
gtgagcctagcctcgtgtgcagctgatggctctgtcaaactctggaacctggaaagtgat
gagccggtggcagacatcgagggacacagcatgcgagtggcccgtgtgatgtggcacccc
tcagggaggttcctgggcaccacctgctacgatcactcgtggcgcctgtgggacctggag
gcgcaggaggagatcctgcaccaggaggggcacagcaagggggtctacgacatcgccttc
cacaccgacggctccctcgctggcaccgggggtctggacgcctttggccgcgtgtgggac
ctgcgcacaggccgctgtattatgttcctggaagggcacctgaaggagatctacgggatc
aacttctccccaaacgggtaccacgtggccacgggcagtggggacaacacctgcaaggtg
tgggacctgcggcagaggaagtgcatctacaccatccctgcccaccagaacctggtcacc
ggcgtcaggtttgaacccaaccacgggaatttcctgctcacgggcgcctacgacaacacg
gccaagatctggacccaccctggctggtccccgctgaagacactggcggggcacgagggg
aaggtgatgggcctggacatctccctggatgggcagctcattgccacctgctcctacgac
agaactttcaagctctggacagccgagtag
DBGET
integrated database retrieval system
