Taeniopygia guttata (zebra finch): 100219685
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Entry
100219685 CDS
T01082
Symbol
PTBP2
Name
(RefSeq) polypyrimidine tract-binding protein 2 isoform X3
KO
K14948
polypyrimidine tract-binding protein 2
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tgu03041
]
100219685 (PTBP2)
Spliceosome [BR:
tgu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100219685 (PTBP2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_NFXL1
Motif
Other DBs
NCBI-GeneID:
100219685
NCBI-ProteinID:
XP_002190438
Ensembl:
ENSTGUG00000005558
LinkDB
All DBs
Position
8:17731680..17778652
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AA seq
537 aa
AA seq
DB search
MDGIVTDVAVGVKRGSDELLSGSVLSSPNSNMSSMVVTANGNDNKKFKGDDKMDGAPSRV
LHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPH
LRNQPIYIQYSNHKELKTDNTLNQRAQAVLQAVTAVQASNAPISGTTVSESAVTPAQSPV
LRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQFGDPVNAQQAKQALDG
QNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPTLDPAIAAAFAKETSL
LGLPVAAVPGALSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLNEEMVTPQSL
FTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMSHLNGQKMYGKIIRVTLSKHQSV
QLPREGLDDQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLF
ANTGGTVKAFKFFQRDHKMALLQMSTVEEAIQALIDLHNYNLGESHHLRVSFSKSTI
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattgtcactgatgttgcagttggtgtgaagagaggatctgacgaacttctt
tcaggcagtgtactcagtagcccgaactctaacatgagcagcatggtagttactgccaat
ggtaatgacaacaagaaattcaaaggtgatgataaaatggatggggctccttctcgtgtt
cttcatatcaggaaattgcctggggaagtgacagaaacagaagttattgctttaggttta
ccttttggtaaagtaaccaacatcctgatgctgaaagggaaaaaccaggcatttttagaa
cttgccacagaagaagcagctatcactatggttaattactactctgctgtgacacctcat
cttcggaaccaacccatttatatccagtattccaatcataaagagctaaagactgataac
acacttaaccagcgggcccaagctgttcttcaggcagtgacggctgtgcaggcatcaaac
gctcccattagtgggaccactgttagtgagagtgcagtgactccagctcagagtccggta
cttagaataattattgacaacatgtactatccagtaaccctggatgttcttcatcagata
ttctctaaatttggtgctgtattgaagataatcacattcacaaagaataaccagtttcaa
gctttactgcaatttggtgatccagtaaatgcacagcaagcaaaacaagccttagacggt
caaaatatttataatgcttgctgtaccctacgaattgatttttccaaattggtgaatttg
aatgtcaagtacaacaatgataaaagcagggactacactcgtcctgaccttccatctggc
gatggacagccaactctggacccagctattgctgcagcatttgccaaggagacctctctt
ctagggcttcctgttgcagctgttccaggagctctgagtcctttggctattccaaatgct
gctgctgcagctgctgctgctgctgctggtcgtgtgggaatgcctggagtttcagctggt
ggcaatacagtcctcctggttagcaatttaaatgaagagatggttacgccccaaagtctg
tttaccctcttcggtgtttatggtgatgtgcagcgtgtgaagattttatacaataagaaa
gatagtgctcttatacagatggctgatggaaaccagtcacagctggccatgagccatctt
aatggacaaaaaatgtatggaaagattattcgggttaccctttctaaacatcagtcagta
caactacctcgagagggacttgatgaccaagggctgactaaagattttggtaattcacct
ttgcaccgcttcaagaaacctggttcaaaaaactttcaaaatatattccctccttctgca
acacttcatctgtccaatattccaccatcagtagcagaagaggatctacgcacattgttt
gctaacactggaggcactgtgaaagcatttaaattttttcaaagagatcacaagatggca
cttcttcagatgtcaacagtagaagaagctattcaggctttgattgatcttcacaattac
aatctgggagaaagtcaccatctgagagtttctttctctaagtcaactatttaa
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