Taeniopygia guttata (zebra finch): 100219722 Help Entry 100219722         CDS       T01082                                  Symbol COL2A1 Name (RefSeq) collagen alpha-1(II) chain   KO K19719   collagen type II alpha Organism tgu  Taeniopygia guttata (zebra finch) Pathway tgu04510   Focal adhesion tgu04512   ECM-receptor interaction Brite KEGG Orthology (KO) [BR:tgu00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     100219722 (COL2A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     100219722 (COL2A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:tgu00536]     100219722 (COL2A1) Glycosaminoglycan binding proteins [BR:tgu00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    100219722 (COL2A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Motif Other DBs NCBI-GeneID:  100219722 NCBI-ProteinID:  XP_032600780 LinkDB All DBs Position 29 Genome browser AA seq 1249 aa AA seqDB search MGPRGPPGPPGKPGDDGESGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGA KGEAGAPGAKGESGSPGENGSPGPMGPRGLPGERGRPGPSGAAGARGNDGLPGPAGPPGP VGPAGAPGFPGAPGSKGEAGPTGARGPEGAQGPRGESGTPGSPGPAGAPGNPGTDGIPGA KGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGETGPAGP QGAPGPAGEEGKRGARGEPGAAGPLGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPAGL AGPKGATGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPTGAPGEDGRPGPPGPQGARGQ PGVMGFPGPKGGNGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGA PGPSGFQGLPGPPGPPGESGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGP RGLPGTPGTDGPKGATGPAGPTGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGA PGKDGARGLTGPIGPPGPAGPNGEKGESGPPGPSGAAGARGAPGERGEPGAPGPAGFAGP PGADGQPGAKGEQGEPGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGF PGAAGRVGPPGPNGNPGPPGPPGSAGKDGPKGARGDAGPPGRAGDPGLQGPAGPPGEKGE PGEDGPAGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGSTGDRGP PGPVGPPGLTGPAGEPGREGNPGSDGPPGRDGAAGVKGDRGETGPVGAPGAPGAPGAPGP VGPTGKQGDRGETGAQGPMGPSGPAGARGMPGPQGPRGDKGEAGEAGERGLKGHRGFTGL QGLPGPPGPSGDQGAAGPAGPSGPRGPPGPVGPSGKDGSNGMPGPIGPPGPRGRSGEPGP AGPPGNPGPPGPPGPPGTGIDMSAFAGLGQPEKGPDPGRYMRADEAAPGLRPHDAEVDAT LKALNNQIENIRSPEGSRKNPARTCRDIKLCHPDWKSGDYWIDPNQGCTLDAIKVFCNMA TGETCVYPSPGSIPRKNWWSSKAKEKKHVWFAETINGGFHFSYGAEDLAPNTANIQMTFL RLLSTEGSQNVTYHCRNSVAYLDEESGSLRKALLIQGSNDVEIRAEGNSRFTYSVLEDGC TKHTGKWGRTVIEYRSQKTSRLPIVDIAPMDIGGPEQEFGVDLGPVCFL NT seq 3750 nt NT seq  +upstreamnt  +downstreamnt atgggtccccggggacctccgggacctcctggcaaacccggtgacgacggcgagagcggc aaacccggcaaatccggcgagcgcggcccccccgggccccagggcgctcgtggcttcccc gggacccccggcctgcccggagtcaaaggccaccggggctaccccggcctggacggcgcc aagggagaggcgggagcgcccggagccaagggcgagtccggctccccgggcgagaacggc tcccccggacccatgggtccccgcgggctgcccggagaacgaggacgccccggcccctcg ggcgctgcgggcgctcgtggcaacgacggcctcccgggcccggccggacccccgggtccc gtcggccccgcaggagcccccggcttccccggcgcccccggctccaagggtgaagcgggt cccaccggagcgcgaggacccgagggtgcccagggcccccgcggggagtccgggaccccc ggctcgcccggccccgccggcgcccccgggaacccagggacggacggcatccccggagcg aagggatcggcgggcgctccaggaatcgccggcgctccaggattccccggcccccgcggc ccacccggaccccagggagccaccggcccgctgggccccaagggacagacgggcgagccc ggcatcgcgggattcaaaggcgagcagggacccaagggagagacgggccccgcgggaccc cagggcgcccccggaccggcgggggaggaaggcaagagaggagcccgcggagagcccgga gctgccggacctttggggccgcctggagagaggggagctcccggcaaccgcggcttcccc gggcaggacgggctggccggccccaagggcgcccccggtgagcgcggccccgctggcctg gccggccccaaaggagccaccggcgaccccggacgccccggagagcccggcctgcctgga gccaggggtctcacgggtcgccccggggacgctgggccccaaggcaaagtcggccccaca ggtgcccccggcgaggacggacgccccggcccccccggcccgcagggggctcggggccag cctggcgttatggggttccctggtcccaaaggtggcaatggcgagcctggaaaagccggt gagaagggacttcccggagcaccggggctgaggggacttcccggcaaggacggagagacc ggagccgccggaccccccgggcccgccggcccggcaggggagaggggggagcaaggagcc cccggcccctccggcttccaggggctgccagggccaccaggtccccccggcgagagcggc aagcccggagatcagggtgttcctggagaagccggagcccccgggctggtgggccccagg ggcgagcgcggtttccccggcgagcgcggctctcccggcgctcagggcctgcaggggccc cgcgggctgcccggtacccccggcaccgacggacccaagggcgccaccggccccgccggc cccaccggcgcccagggacccccggggctgcaggggatgcccggggagagaggagcggct ggcatcgccgggcccaagggggacaggggcgacgtcggagagaagggacccgagggagcc cccggaaaggacggagcccgcggtctgaccggtcccatcggcccccccggccccgctggc cccaacggcgagaagggcgagtctggcccccccggcccgtcgggagccgccggtgcccgc ggtgccccgggagagcgcggagagcccggagcccccggccccgccgggttcgccggtccc ccgggcgccgacggccagcccggagccaagggcgagcagggcgagcccggccagaagggc gacgccggagcccccgggcctcagggaccctccggagcccccggaccgcagggtcccacc ggtgtcaccggtcccaaaggagcccggggcgctcagggacccccgggagccaccggattc ccgggagccgccggacgcgtcggaccccctggccccaacggtaaccccggcccccccggg ccccccggctccgcgggcaaggacggccccaagggcgcccggggcgacgcgggacccccg ggccgggcgggggacccggggctgcagggccccgccggcccccccggcgagaagggcgag cccggcgaggacggccccgcgggcccggacggtccccccggtccccaggggctggcagga cagcgcggcatcgtggggctgccggggcagcgcggcgagcgcggattcccggggctgccg ggaccctcgggagagcctggaaaacagggagcccctggatctactggtgaccggggcccc cccgggcctgtgggaccccccgggctgacggggccagccggagagcccggcagggaggga aatcccggctctgacggacccccgggcagggatggggcggccggggtgaagggcgatcgt ggcgagaccggccccgtgggtgctcccggagctcccggcgctcccggcgctcccggcccc gtgggacccacgggaaaacagggagacagaggagagacgggtgctcagggtcccatgggt ccctccggccccgctggcgcccgggggatgccgggtccccaggggccgcgcggtgacaag ggcgaggcgggcgaggccggcgagcgcggcctgaaggggcaccggggcttcaccgggctc caggggctgcccgggccccccggtccctctggagaccagggcgctgccgggcccgcgggt ccctccgggccaaggggtccccccggccccgtgggcccttcgggcaaggacggctccaat gggatgcccggacccatcgggccccccggaccccgcgggaggagcggcgagcccggcccg gcgggcccccccgggaaccccggcccgcccgggccccccgggccccccggcaccggcatc gacatgtcggcgttcgcggggctggggcagcccgagaagggccccgaccccgggcgctac atgcgggcggacgaggcggccccggggctgcggccgcacgacgccgaggtggacgccacc ctcaaggccctcaacaaccagatcgagaacatccgcagccccgagggctcccgcaagaac ccagccaggacctgccgagacatcaaactctgccaccccgactggaagagcggcgattac tggatcgaccccaaccagggctgcacgctggacgccatcaaggtcttctgcaacatggcc acgggggagacgtgcgtgtaccccagccccggcagcatccccaggaagaactggtggagc agcaaagccaaggagaagaagcacgtctggttcgccgagaccatcaacggcggcttccac ttcagctacggcgctgaggacctggcgcccaacacggccaacatccagatgaccttcctg aggctgctgtccaccgagggctcccagaacgtcacctaccactgccgcaacagcgtggcc tacctggacgaggagtcgggcagcctgaggaaggcgctgctcatccagggctccaacgac gtcgagatccgcgccgagggcaacagccggttcacctacagcgtgctggaggacggctgc acgaaacacacggggaagtggggcaggactgtcatcgagtaccgctcgcagaagacctcg cgcctgcccatcgtggacattgcacctatggacattgggggacccgagcaggagtttggg gtcgacctcggccccgtctgcttcttgtaa

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