Taeniopygia guttata (zebra finch): 100219944
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Entry
100219944 CDS
T01082
Symbol
ZC3H12A
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgu03019
]
100219944 (ZC3H12A)
Messenger RNA biogenesis [BR:
tgu03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
100219944 (ZC3H12A)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_2
zf-CCCH
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
100219944
NCBI-ProteinID:
XP_030146258
UniProt:
A0A674H102
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Position
23:complement(649016..657334)
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AA seq
616 aa
AA seq
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MSAGSLAPGWPEALPPARPAAGMSRSPEGPADGPELQLKVDFFRKLGYSSEEIRGVLQKL
GLGADTNTVLGELVKHGPAERDGPEAPPEPAEAPLVPRGGAGNKSPAPGPEEAESDNLKP
IVIDGSNVAMSHGNKEVFSCRGILLAVQWFWDRGHKDITVFVPSWRKEQPRPDVLITDQY
ILRDLEKKKILVFTPSRRVGGKRVVCYDDRFIVKLAHESDGIIVSNDTYRDLQSERPEWK
KFIEERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPVVPEHKKQQCPYGKKCTYGIK
CKFYHPERINQPQRSLADELRANARLSPTRSTSAKEEKKGKRGSQAELLCSVPTESDKSS
LQKVSAERKSLAHKAKPSDVVLQAKGCVSGSVSPDRYQQPPMDSLSYISQEHLDSGIGSL
ENQLSDMWPHRCTSHCDRSHAEQVPVCTCGGQRPVYPHSPSLEQNGLVSYNHGSHRSPSP
GAGFLQYSPEPPCSGAARSFSGYGVPVPAGAAGQYSLPGEFGAALPRSREFWSEPYPLPQ
VRSPGVHRAPGPAYGDAGPWAAEEQFAEERARVHVRLCSIFHPHLVDAVMGRFPRLLDPQ
RLAAEILTYKAQNPGV
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgggcagcctggccccgggctggcctgaggcgctgccgcccgcccggcccgcc
gcgggcatgagccggagccccgaggggcccgcggacggccccgagctgcagctgaaggtg
gatttcttccgcaagctcggctactcctcggaggagatccgcggcgtgctgcagaagctg
ggcctgggcgccgacaccaacacggtgctgggggagctggtgaagcacggcccggccgag
cgggacggccccgaggccccgcccgagcccgccgaggccccgctggtcccgcggggcggc
gccggcaacaaatccccggcgcccggccccgaggaagcggagagcgacaacctgaagccc
atcgtcatcgatggcagcaacgtggccatgagccatgggaataaagaagtgttctcctgc
cgaggtatccttctggctgtccagtggttttgggacaggggacacaaggatattacagtc
tttgtgccatcatggaggaaggagcagccccgaccagatgtactcataacagaccagtac
atcctgcgtgacctggagaagaagaagatcctggtgttcacgccgtcgcggcgggtgggc
ggcaagcgcgtggtgtgctacgacgaccgcttcatcgtgaagctggcccacgagtccgac
ggcatcatcgtgtccaacgacacctaccgcgacctgcagagcgagcggcccgagtggaag
aaattcatcgaggagcgcctgctgatgtactcctttgttaatgacaagtttatgcctcca
gatgatcccttagggcgtcatggccccagcctggacaacttcctcaggaagaaacctgta
gttccagaacacaagaaacagcagtgcccttacgggaaaaaatgcacttatggaattaag
tgtaagttctaccatcctgaaaggatcaaccagccccagcgctcgttagctgatgaactc
cgtgccaatgccaggctgtctccaaccagaagtaccagtgccaaggaggagaagaagggg
aagcggggttcccaggcagagctcttgtgctctgtgcccacagagagtgacaaaagctct
ttacagaaggtctctgcagagaggaagagcttggcccacaaagccaagcccagtgacgtt
gtgcttcaggccaaaggctgtgtgtcgggcagtgtctcccctgacaggtaccagcagcct
cccatggactctctgtcttacatctctcaggagcatctcgactcaggcattgggtctctg
gagaaccagctgtctgacatgtggcctcacaggtgtaccagccactgtgaccgttcccac
gcagagcaggtgcccgtctgcacctgtggtgggcagagacctgtctacccgcattccccc
agcttagagcagaacgggctggtctcctacaaccacggctcccatagatctccttcccct
ggtgctggcttcctgcagtacagccctgagccgccttgctcgggagcagcccgctctttc
tcgggctatggggtgcccgtgcccgccggtgctgcggggcagtacagcctgcccggcgag
ttcggcgccgccctgccgcgctcgcgggagttctggtccgagccgtacccgctgccgcag
gtcaggtcccccggcgtgcacagggccccggggccggcctacggggacgcggggccctgg
gctgctgaggagcagttcgccgaggagcgggccagggtgcacgtcaggctgtgcagcatc
ttccacccgcacctggtggatgccgtgatgggccgcttcccccggctgctggacccccag
aggctggcagcagagatcctcacctacaaggcccagaacccaggtgtgtga
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