Taeniopygia guttata (zebra finch): 100220035
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Entry
100220035 CDS
T01082
Symbol
LAMC1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04510
Focal adhesion
tgu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100220035 (LAMC1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100220035 (LAMC1)
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GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
Laminin_B
Motif
Other DBs
NCBI-GeneID:
100220035
NCBI-ProteinID:
XP_032605564
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Position
8:23471485..23537964
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AA seq
1600 aa
AA seq
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MGAGGERWALWLWVLWLWVPARCGAAMDECAEERSGRAQRCMPEFVNAAFNATVLATHTC
GTPAEEYCVQTGVTGVTQSCHLCDAAQPHLSHGAAFLTDYNSPADATWWQSRTMLAGVQH
PTAVNLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTKEDGPWVPYQYYSGSCESTYHKI
NRGFIRTGEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDI
RVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNELGKLVCNCKH
NTFGVDCEKCLPFFNDRPWRRATAESANECLPCDCNGRSQECYFDPELYRATGHGGHCTA
CAGNTDGPRCERCRDSFYRLASDQGCLPCSCNPVGSLSTQCDSYGQCSCKPGVMGDKCDR
CQPGFHSLSEAGCRPCSCNAAGSTGECNVETGRCACKDNVEGFHCERCKPGFFHLDSSNP
RGCTPCFCFGHSSVCSSAVGYSIYSITSNFEFGEDEWHAEQRDGSEVLLQWSAETQDISV
ISDTYFPMYFVAPRKFLGNQVLSYGQNLTFSFRVDRRDTRLSAEDLVLEGAGLRVSVPLI
AQGNSYPSENVQTYTFRLHEAADYPWRPALTAFEFQKLLHNLTSIKIRGTYSERSAGHLD
DVTITSARPGPGVPVAWVESCSCPVGYEGQFCERCTSGYRRETPGLGPYSPCVPCACNGH
SETCDPETGMCNCRDNTAGTHCEKCSDGYYGDATAGTASDCQPCPCPGTSSCAIVPRTKE
VVCTSCQAGTTGKRCELCDDAYFGDPLGRNGAVRPCRLCQCNNNIDPNAVGNCDRQTGEC
LKCIYNTAGFYCDRCKDGFFGNPLASDPADKCRACHCNPYGTVNQQTVCNQVTGQCECLS
HVTGRDCSACEPGFFNLQSGRGCERCNCHALGSTSGQCDIRTGQCECQPGVTGQQCDSCE
SNHFGFGSEGCKPCDCDPEGSRSLQCRENGHCECKEGFVGSRCNQCEENYFYNRSWPGCQ
ECPACYRLVKDKVAEQRQRLQELENLIANLGTREETVTDEAFEERLKQAEREVTELLHEA
QKSKDVDQGLMDRLKDINSTLVSQLNRLRNIQGTVQETESLAEQARVRVEDTEDLISMAS
DMLEKAKMAADNVSITPPEQSGDPNNMTLLAEEARKLAERHKKEADEIVRTAKAANDTST
EAYQLLLKTLAEENQTAIDIDELNQKYNQARNISRDLEKQANKVLAEAEEAGNRALQIYA
NLTSLPTVDSTGLENKANKIKKEAEELDQLIARKLKDYEDLREDMKGKELEVKNLLEKGK
TEQQTADQLLARADAAKALAEEAARKSSGTLQEANTILRNLKDFDRRVNDNKTAAEEALK
KIPAISQTIAEANNKTHQAELALGNAAADAREAKARADDAEKIASSVQKSAAATRAEADK
TFADVTGLAREVDDMMKQLQDAEKELKRKQADAEQDMKMANEASQAAQEAEDNARKAKNS
VNSLLTVINDLLDQLGQLETVDLNKLNEIEGTLNSAKDQMKDSDLDQKVSFLEREAKKQD
DAIQAYNRDIEEILKDISNLEDIRKTLPSGCFNTPSIEKP
NT seq
4803 nt
NT seq
+upstream
nt +downstream
nt
atgggggccggcggcgagcgctgggcgctgtggctgtgggtgctgtggctgtgggtgccc
gcgcggtgcggcgctgccatggacgagtgcgcggaggagcggagcgggcgggcgcagcgc
tgcatgcccgagttcgtgaacgcggcgttcaacgcgaccgtgctggccacgcacacgtgc
gggacgccggccgaggagtactgcgtgcagaccggggtcaccggcgtcacccagtcctgc
cacctctgcgacgccgcccagccgcacctgagccatggcgccgccttcctcaccgactac
aacagcccggccgacgcgacctggtggcagagccgcaccatgctggccggcgtgcagcac
cccaccgccgtcaacctcaccctgcacctcggaaaagcctttgacatcacgtacgtgcgc
ctcaagttccacacgagccggcccgagagctttgccatctacaagcgcacgaaggaggac
ggcccttgggtgccctaccagtactacagtgggtcctgtgagagcacctaccacaaaatc
aaccgcggcttcatccgcaccggcgaggacgagcagcaggcgctctgcaccgatgagttc
agcgacatctcccctctcaccggaggcaacgtggccttctcaacgctggaggggcggccc
agtgcctacaactttgacaacagccctgtgctgcaggaatgggtgacagctacagatatt
agagtgaccctcaaccgtctgaacacatttggagatgaagttttcaatgacccaaaagtt
ctcaagtcttactactatgcaatttctgattttgctgtgggtggtaggtgcaaatgcaac
gggcacgcgagtgagtgtgtgaagaatgagcttgggaagctggtctgcaactgcaagcac
aacaccttcggggtggactgtgaaaagtgccttcccttcttcaacgaccgcccgtggagg
agagcgacagcggagagcgccaacgagtgcctgccgtgcgactgcaacgggcggtcccag
gagtgctacttcgaccccgagctgtaccgcgccacgggccacggcggccactgcacggcc
tgtgccggcaacaccgacgggccccgctgcgagcgctgccgggacagcttctaccgcctg
gccagcgaccagggctgtctgccctgcagctgcaaccccgtcggctccctcagcacgcag
tgcgacagctatggccagtgcagctgcaagcctggtgtgatgggggacaagtgtgaccgg
tgccagccagggttccactccctctccgaagctgggtgcaggccctgttcttgcaatgct
gctggcagcacaggggagtgcaacgtcgagacagggcggtgtgcgtgcaaggacaatgtg
gaaggattccactgtgagagatgcaaacctggatttttccatctggattcctccaatcca
agaggctgtactccctgcttctgttttggacactcttcagtctgcagcagtgctgtgggc
tacagcatctatagcatcacctccaactttgagtttggagaggatgagtggcatgctgag
cagcgtgatggctcagaagtcttgctgcagtggagtgctgagacccaggacatctccgtt
atctcagacacctacttccccatgtacttcgttgcaccacgcaagttcttgggcaaccag
gttttgagttacgggcaaaacctgaccttctccttccgtgtggacaggcgagacacgcgc
ctctctgcagaggacctggtgctggagggggctgggctgagagtgtcggtgcctctcatt
gcccagggcaactcctaccccagtgagaatgtgcagacctacaccttcaggctccatgag
gctgcagattacccgtggaggcctgctcttacagcatttgaattccaaaagcttctccac
aacttgacttccatcaagatccgtgggacatacagtgagagaagtgccggccacctggac
gatgtcaccatcacgagtgctcgccccggacccggcgtgcctgtggcctgggtggagagc
tgctcgtgtcccgtgggatacgaggggcagttctgtgagcgctgcacctctgggtaccgc
cgggagaccccaggcctcgggccctacagcccctgcgtgccctgcgcgtgcaacgggcac
agcgagacctgtgatcccgagacgggcatgtgcaattgcagggataacacggcagggacg
cactgtgagaagtgcagcgatgggtattacggcgatgccacggccggcacagcctcggac
tgccagccctgcccgtgcccaggcacctcgagctgtgccattgtgccccgcaccaaggag
gtcgtgtgcaccagctgccaggctggcactacaggcaagaggtgtgagctgtgtgatgat
gcctatttcggagacccactgggcagaaatggtgctgtgaggccctgccgcctgtgccag
tgcaacaacaacattgaccccaatgccgtgggcaactgcgaccgccagaccggcgagtgc
ctcaagtgcatctacaacaccgccggcttctactgtgaccgctgcaaggatggcttcttc
gggaaccccctggcctctgaccccgctgacaagtgcagagcttgtcactgcaatccctac
ggcacagtgaatcagcagacagtctgcaatcaagtgactgggcagtgtgagtgcttgtct
cacgtcactgggagggactgcagtgcctgtgagcctggattcttcaacctccagagtgga
cgtggctgtgagaggtgcaactgccacgcgctgggctccaccagtgggcagtgtgacatc
cggacggggcagtgcgagtgccagccaggcgtcaccggccagcagtgtgacagctgtgag
agcaaccacttcggctttggctctgaaggctgcaaaccctgcgactgtgatcctgagggc
tcgcggtccctgcagtgccgggagaacggtcactgcgagtgcaaggagggcttcgtgggg
agccgctgcaaccagtgtgaggagaactatttctacaaccgctcgtggccaggctgccag
gagtgtccagcctgttacagactagtgaaagataaggtggcagagcaacgtcaaaggctg
caggagctggaaaatcttatagcaaatctgggtaccagagaagaaactgtaactgatgaa
gccttcgaagagcggttgaagcaggcagagagagaagttacagagctgctccatgaagca
caaaagagcaaagacgtagatcagggcctcatggatcgtctcaaagacatcaacagcacc
ttagtgagtcagctcaacaggctgaggaacatccagggcacagtgcaggagacggagagc
ctggcggagcaggcccgggtgcgggtggaggacactgaggacctgatcagcatggcttct
gacatgctggagaaggccaagatggcagctgacaacgtgtccattacacctccagagcaa
agcggggaccccaacaacatgactctgctggcagaagaggcccgtaagctggcagaaagg
cataaaaaggaagctgatgagattgttcgcacagccaaggctgcaaatgacacttccacg
gaagcgtatcaactgctgctgaagacgttggctgaagaaaaccaaactgcaattgatatt
gatgagctcaatcagaagtacaatcaagcaaggaatatttctcgagacctggagaaacag
gccaacaaggtgcttgcggaggcagaggaagctggaaacagagccctgcagatatatgct
aatctcaccagcctgcctactgtggattccacggggctagagaataaagcaaataagatc
aagaaggaagcagaggagctggatcaactaattgccaggaagctaaaggattatgaggac
ttgagagaagatatgaaaggaaaggagctagaagtaaagaacctcttggagaaagggaag
acagagcagcagactgcagaccagctgttggcacgagcagatgcagcaaaagccctggct
gaagaagctgctcggaagagcagtggcacgctacaggaggccaataccattctcaggaac
ctgaaagactttgacaggcgggtgaacgataacaagacggcagccgaggaggcactgaag
aagatccctgccatcagccagaccattgcagaggccaacaacaagactcaccaggcagag
ctggcactgggcaacgctgctgccgatgcccgtgaggccaaggccagagcagatgatgct
gagaagattgccagctctgttcagaagagtgctgctgctaccagagccgaagccgacaag
acctttgctgatgtgacaggactggccagggaagtggatgacatgatgaagcagctgcag
gatgcagaaaaggagctgaagcggaagcaggccgatgctgagcaggatatgaagatggca
aatgaggcctcacaggctgcccaggaggcagaagacaatgcaagaaaagctaagaactcc
gtgaacagcctgctcactgtcattaatgacctgttggatcagctagggcaactggagaca
gtggacttgaacaaactgaatgaaattgaaggtaccctgaacagtgccaaagaccagatg
aaagacagtgacctggaccagaaagtgtctttccttgagagagaagccaagaagcaagat
gatgcgatacaggcctacaacagggacattgaagagatcctgaaggacattagcaacctg
gaagacatcaggaagactctgccatctggctgtttcaacaccccgtccattgagaaacct
taa
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