KEGG   Taeniopygia guttata (zebra finch): 100220084
Entry
100220084         CDS       T01082                                 
Symbol
RBM17
Name
(RefSeq) splicing factor 45
  KO
K12840  splicing factor 45
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100220084 (RBM17)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tgu03041]
    100220084 (RBM17)
Spliceosome [BR:tgu03041]
 Complex A
  U2 snRNP components
   U2 related factors
    100220084 (RBM17)
 Complex B
    100220084 (RBM17)
SSDB
Motif
Pfam: G-patch RRM_1
Other DBs
NCBI-GeneID: 100220084
NCBI-ProteinID: XP_002189506
Ensembl: ENSTGUG00000002013
LinkDB
Position
1A:3490073..3502845
AA seq 401 aa
MSLYDDLGVETSDSKTEGWSKNFKLLQSQLQVKKAALTQAKSQRTKQTTVLAPVIDLKRG
SSSDERQIVDTPPHVAAGLKDPVPSGFSAGDVLIPLADEYDPMFPNDYEKVVKRQREERQ
RQRELERQKEIEEREKRRKDRHEASGFSRRPDPDSDEDEDYERERRKRSMGGAAIAPPTS
LVEKDKEPVASFPYEEESRPRAPSSKAAIPPPVYDEPERPRSPTGPSNSFLANMGGTVAH
KIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGESTEKETGKKADSNPLTEIL
KCPTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLEFE
RVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDLAEQV
NT seq 1206 nt   +upstreamnt  +downstreamnt
atgtcactttacgatgacttgggggttgagaccagcgattctaaaacagaaggctggtcc
aagaatttcaaactgctgcagtctcagttgcaggtgaagaaagcagctctcacacaagca
aagagtcagagaacaaaacaaaccacagtccttgctccggtgattgacctgaaacgaggc
agctcctctgatgagagacagattgtggacacaccccctcatgtagcagctgggctaaag
gatcctgtccctagtggtttttctgcaggagatgtgttgattcccctggcagatgaatat
gatcccatgttcccaaatgactacgagaaagtggtgaaacgtcagagagaggaacggcag
cggcagcgggagctggagaggcagaaggagattgaagagagagaaaaaaggcgtaaagac
aggcatgaagccagtgggttttcgagacgaccagatccagattctgatgaagatgaagat
tatgaaagggagagacggaaaagaagtatgggaggagctgccattgcgccacccacttct
ctcgtggagaaggacaaagaacctgtagcatcattcccatatgaggaggagtcaagacct
cgggcaccttcttccaaagcagcaattcctcccccagtgtatgatgagccagagagacct
cgttcccccacaggacccagcaactccttcctcgccaacatgggggggacagtagctcac
aaaatcatgcagaagtatggtttcagagagggccaggggctgggcaaacatgaacagggg
ctcagcacagcactgtcagtagagaaaacaagcaagaggggtggcaagatcattgttggt
gaatctacagagaaagaaacgggcaagaaggcggattccaaccccttaactgagatcctg
aaatgcccaactaaagtggtcttactgaggaacatggttggtgctggggaggtggatgaa
gaccttgaagttgaaactaaggaggaatgtgagaaatatggcaaggttgggaaatgtgtc
atcttcgagatccctggtgcccctgatgatgaagctgtaagaatatttttagagtttgaa
cgggttgaatctgccatcaaagctgttgtggatctaaatggaagatattttggaggcaga
gtggtgaaggcttgtttctacaacctggacaagttcagagtgctggatctggcggaacaa
gtttga

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