Taeniopygia guttata (zebra finch): 100220084
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Entry
100220084 CDS
T01082
Symbol
RBM17
Name
(RefSeq) splicing factor 45
KO
K12840
splicing factor 45
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100220084 (RBM17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tgu03041
]
100220084 (RBM17)
Spliceosome [BR:
tgu03041
]
Complex A
U2 snRNP components
U2 related factors
100220084 (RBM17)
Complex B
100220084 (RBM17)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
G-patch
RRM_1
Motif
Other DBs
NCBI-GeneID:
100220084
NCBI-ProteinID:
XP_002189506
Ensembl:
ENSTGUG00000002013
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All DBs
Position
1A:3490073..3502845
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AA seq
401 aa
AA seq
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MSLYDDLGVETSDSKTEGWSKNFKLLQSQLQVKKAALTQAKSQRTKQTTVLAPVIDLKRG
SSSDERQIVDTPPHVAAGLKDPVPSGFSAGDVLIPLADEYDPMFPNDYEKVVKRQREERQ
RQRELERQKEIEEREKRRKDRHEASGFSRRPDPDSDEDEDYERERRKRSMGGAAIAPPTS
LVEKDKEPVASFPYEEESRPRAPSSKAAIPPPVYDEPERPRSPTGPSNSFLANMGGTVAH
KIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGESTEKETGKKADSNPLTEIL
KCPTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLEFE
RVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDLAEQV
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgtcactttacgatgacttgggggttgagaccagcgattctaaaacagaaggctggtcc
aagaatttcaaactgctgcagtctcagttgcaggtgaagaaagcagctctcacacaagca
aagagtcagagaacaaaacaaaccacagtccttgctccggtgattgacctgaaacgaggc
agctcctctgatgagagacagattgtggacacaccccctcatgtagcagctgggctaaag
gatcctgtccctagtggtttttctgcaggagatgtgttgattcccctggcagatgaatat
gatcccatgttcccaaatgactacgagaaagtggtgaaacgtcagagagaggaacggcag
cggcagcgggagctggagaggcagaaggagattgaagagagagaaaaaaggcgtaaagac
aggcatgaagccagtgggttttcgagacgaccagatccagattctgatgaagatgaagat
tatgaaagggagagacggaaaagaagtatgggaggagctgccattgcgccacccacttct
ctcgtggagaaggacaaagaacctgtagcatcattcccatatgaggaggagtcaagacct
cgggcaccttcttccaaagcagcaattcctcccccagtgtatgatgagccagagagacct
cgttcccccacaggacccagcaactccttcctcgccaacatgggggggacagtagctcac
aaaatcatgcagaagtatggtttcagagagggccaggggctgggcaaacatgaacagggg
ctcagcacagcactgtcagtagagaaaacaagcaagaggggtggcaagatcattgttggt
gaatctacagagaaagaaacgggcaagaaggcggattccaaccccttaactgagatcctg
aaatgcccaactaaagtggtcttactgaggaacatggttggtgctggggaggtggatgaa
gaccttgaagttgaaactaaggaggaatgtgagaaatatggcaaggttgggaaatgtgtc
atcttcgagatccctggtgcccctgatgatgaagctgtaagaatatttttagagtttgaa
cgggttgaatctgccatcaaagctgttgtggatctaaatggaagatattttggaggcaga
gtggtgaaggcttgtttctacaacctggacaagttcagagtgctggatctggcggaacaa
gtttga
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