Taeniopygia guttata (zebra finch): 100220100
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Entry
100220100 CDS
T01082
Symbol
APP
Name
(RefSeq) amyloid-beta precursor protein isoform X1
KO
K04520
amyloid beta A4 protein
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tgu01002
]
100220100 (APP)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tgu00535
]
100220100 (APP)
00536 Glycosaminoglycan binding proteins [BR:
tgu00536
]
100220100 (APP)
Peptidases and inhibitors [BR:
tgu01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
100220100 (APP)
Proteoglycans [BR:
tgu00535
]
Cell surface proteoglycans
Others
100220100 (APP)
Glycosaminoglycan binding proteins [BR:
tgu00536
]
Heparan sulfate / Heparin
Others
100220100 (APP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Beta-APP
Kunitz_BPTI
Insulin_TMD
Gluconate_2-dh3
Prominin
Motif
Other DBs
NCBI-GeneID:
100220100
NCBI-ProteinID:
XP_030116128
Ensembl:
ENSTGUG00000013557
LinkDB
All DBs
Position
1:4921812..5058835
Genome browser
AA seq
750 aa
AA seq
DB search
MLPHLAVLLLAAGAARALEVPADGNAGLLAEPQIAMFCGKLNMHMNVQNGKWESDPSGTK
TCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRGWKQCNGHPHIVVPYRCLVG
EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKESCSEKSMNLHDYGMLLPCGIDKFR
GVEFVCCPLAEESDNLDSADAEDDDSDVWWGGADADYADGSDDKAVEEQAEEDEELTVVE
DDDADDDDDDGDEIEETGEEYEEATERTTSIATTTTTTTESVEEVVREVCSEQAETGPCR
AMISRWYFDMAEGKCAPFFYGGCGGNRNNFDSEEYCMAVCGSIIPTTAASTPDAVDKYLE
TPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEKVE
SLEQEAANERQQLVETHMARVEAMLNDRRRIALENYITALQTVPPRPRHVFNMLKKYVRA
EQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSFLYNVPAVAEEIQD
EVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVDGDFSLDDLQP
WHPFGVDSVPANTENEVEPVDARPAADRGLTTRPGSGLTNVKTEEISEVKMDAEFRHDSG
YEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIHHGVVEVDA
AVTPEERHLSKMQQNGYENPTYKFFEQMQN
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgctgccccacttagccgtcctgctgctggctgccggcgccgcccgggctctagaggtg
cctgctgatggaaatgcagggctgctggcagaacctcagattgccatgttctgtggcaaa
ctcaacatgcatatgaacgtgcagaatggaaagtgggaatcagacccctctggcaccaag
acctgcattgggacaaaagaagggattcttcagtactgccaggaagtataccctgaattg
caaatcaccaatgttgttgaagccaaccaaccagttacaatacagaactggtgcaagagg
ggatggaagcagtgcaatggtcacccacatattgtggttccctacagatgtctggtgggc
gagtttgtgagtgatgcccttctggtgccagacaagtgcaagttccttcaccaggaaaga
atggatgtgtgtgaaactcacctgcattggcatactgttgctaaagagtcctgtagtgag
aagagcatgaatctgcatgactatggcatgctgctgccctgtggaattgacaagtttcgt
ggtgtggagtttgtctgctgcccgttagcagaggaaagtgacaatcttgattcagctgat
gctgaagatgatgattcagatgtctggtggggaggtgcagatgcagattatgcagatgga
agcgatgataaggcagtagaagaacaagcagaggaagatgaggagctaactgttgtggaa
gatgacgatgctgatgacgatgatgatgatggtgatgaaattgaagaaacaggagaagag
tatgaggaggcaactgaaagaactaccagcattgcaaccactaccaccacaactacagag
tctgtggaagaggtcgtcagagaggtgtgctctgagcaagccgagaccgggccgtgccgc
gcgatgatctcccgctggtactttgacatggctgaaggaaagtgcgcacccttcttttac
ggcggctgtggcgggaaccggaacaactttgactcggaggaatactgcatggcggtctgt
ggcagcatcatccctaccacagctgctagcactcctgatgctgttgacaaatacctggag
acacctggagatgagaatgaacacgcccatttccagaaggccaaggagaggcttgaagct
aagcatcgtgaaagaatgtctcaggtcatgagagagtgggaagaggcagaacgccaagca
aagaacttgccaaaggccgacaagaaagctgttatccagcatttccaggagaaagtggaa
tcactggaacaagaagcagcaaatgaaagacagcagcttgtggagactcacatggcacga
gtggaagccatgctgaatgaccgtcggcgcattgctctggagaactacatcacagccctg
cagactgtcccgcccaggcctcgtcatgtattcaacatgctgaagaagtatgtgcgtgct
gagcagaaggacagacagcacactctcaaacacttcgaacacgtccgcatggtagaccca
aagaaagctgcccaaatcagatctcaggttatgacacatctacgtgtgatatatgaacgc
atgaaccagtctctctccttcctctacaatgtgcctgctgtggcagaggagatccaggat
gaagttgatgaattacttcagaaagaacaaaactactctgatgacgttttggccaatatg
atcagcgaacccagaatcagctatggaaatgatgctcttatgccttcattgacggaaaca
aagactacagttgaacttcttccagtggatggagacttcagcctagatgaccttcagcct
tggcatccctttggagttgattctgttccagccaatacagaaaatgaagttgaacccgtt
gatgcccgcccagctgcagacagaggactcaccacacgaccaggttccgggttgaccaat
gttaagacagaggagatctctgaggtgaagatggacgcggagttccggcatgactcagga
tacgaagttcatcatcaaaagctggtgttctttgctgaagatgtgggttcaaataaaggt
gccatcattggactaatggtgggaggtgttgtcatagccacagtgattgtcattactttg
gtgatgctgaagaagaagcagtacacatctattcatcacggggttgtggaggtggatgct
gcagtgacaccagaggagcgccacctttccaagatgcagcaaaatggctacgaaaatccc
acatacaagttctttgaacagatgcagaactag
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