KEGG   Taeniopygia guttata (zebra finch): 100220104
Entry
100220104         CDS       T01082                                 
Symbol
XPO1
Name
(RefSeq) exportin-1 isoform X1
  KO
K14290  exportin-1
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu03008  Ribosome biogenesis in eukaryotes
tgu03013  Nucleocytoplasmic transport
tgu03250  Viral life cycle - HIV-1
tgu05164  Influenza A
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100220104 (XPO1)
   03008 Ribosome biogenesis in eukaryotes
    100220104 (XPO1)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    100220104 (XPO1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    100220104 (XPO1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tgu03019]
    100220104 (XPO1)
   03009 Ribosome biogenesis [BR:tgu03009]
    100220104 (XPO1)
   03016 Transfer RNA biogenesis [BR:tgu03016]
    100220104 (XPO1)
   03036 Chromosome and associated proteins [BR:tgu03036]
    100220104 (XPO1)
Messenger RNA biogenesis [BR:tgu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     100220104 (XPO1)
Ribosome biogenesis [BR:tgu03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    100220104 (XPO1)
  Pre-60S particles
    100220104 (XPO1)
Transfer RNA biogenesis [BR:tgu03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    100220104 (XPO1)
Chromosome and associated proteins [BR:tgu03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     100220104 (XPO1)
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N TPR_TNPO3_IPO13_2nd mTOR_dom BspA_v Hydrolase_3
Other DBs
NCBI-GeneID: 100220104
NCBI-ProteinID: XP_002199319
Ensembl: ENSTGUG00000006512
UniProt: H0Z824
LinkDB
Position
3:complement(86205243..86240018)
AA seq 1071 aa
MPAIMTMLADHAARQLLDFNQKLDINLLDNVVNCLYHGEGAQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYGLQILENVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDPACV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMVILKLLSEEVFD
FSSGQITQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLIYKFLNVPMFRNVSLKCLTEIAGVSVSQYEEQFVTLFTLTMMQLKQMLPL
NTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGLLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSASPLLSGSQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQTVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQANGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVAENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMAIIVNKLGGHITAEIPQIFDAVFECTLNMINKDFEE
YPEHRTNFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEETAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKIST
PLNPGNPVNNQMFIQEYVANLLKSAFPHLQDAQVKLFVTGLFSLNQDIPAFKEHLRDFLV
QIKEFAGEDTSDLFLEERESALRQAQEEKHKLQMSVPGILNPHEIPEEMCD
NT seq 3216 nt   +upstreamnt  +downstreamnt
atgccagcaattatgacaatgttagcagaccatgcagctcgtcagctgctggattttaac
cagaaactggatatcaatctcttggacaatgtggtgaactgcttgtaccatggagaaggt
gcacagcaaagaatggcacaagaagtgttgactcacttaaaagaacatcctgatgcgtgg
acaagagttgatactattttggagttctctcagaacatgaataccaaatattatggactg
caaatcttggaaaatgtgataaaaacaagatggaagattcttccaaggaaccagtgtgaa
ggtattaaaaaatatgttgttggcctaattatcaagacctcatctgacccagcgtgtgta
gagaaagagaaagtgtatattgggaaactgaatatgattcttgttcagatcctgaaacag
gagtggccaaagcactggccgacatttatcagtgacattgtgggagcgagcaggaccagt
gagagtctctgccagaacaacatggtgatcctgaaactgctgagtgaagaagtgtttgat
ttttccagtggccagattactcaagtaaaagctaagcatttgaaagacagcatgtgcaat
gaattctctcagatatttcaactgtgtcagtttgtgatggaaaactcccaaaatgctccc
ttagtccatgcaactttggaaactttgctacgatttctgaactggattcctctgggatat
atatttgagaccaagttaatcagcacactaatatacaagttcttaaatgttcccatgttt
cgcaatgtctctttgaagtgcctcacagagattgcaggtgtcagtgtaagccagtatgaa
gaacagtttgtaacactttttacactgaccatgatgcagttaaaacagatgcttccttta
aataccaatatccgacttgcatactcaaatggaaaagatgatgaacagaacttcattcag
aatctcagtttgttcctctgcacgttcctcaaggagcatggtctacttatagaaaaaagg
ttaaatctgagggaaacactaatggaggctcttcattacatgttgttggtatcagaagtt
gaagaaacggaaattttcaagatttgtctggagtattggaaccatttagcagctgagctc
tacagggaaagtccgttctccacatcagcttcgccgctgctttcagggagccaacacttc
gatgttcctccaaggagacagctttatttgcctgttttgtccaaggttcgattgctcatg
gtcagccgcatggccaagcctgaagaagtcctggttgtggagaatgatcaaggggaggta
gttcgggaattcatgaaggacacggattccataaacttgtataaaaatatgagagaaacg
ttggtttatctcacacatctggactatgcagacacagaacgaattatgactgaaaagctt
cacaatcaagtgaatggaacagagtggtcgtggaagaatctgaacaccttgtgctgggct
attggctccatcagcggcgccatgcacgaagaagatgaaaagagattcctggttacagta
attaaggatctcctgggactctgcgaacaaaaacgaggaaaggacaataaagccattatt
gcatcaaatataatgtatatagtaggtcaatacccacggtttttgagagctcactggaaa
tttttgaagacagtagtcaacaagctgtttgaatttatgcatgaaactcatgatggcgtg
caggacatggcttgtgataccttcataaaaatagcacaaaaatgccgccgacactttgtc
caggttcaggtgggagaggtcatgccatttattgatgaaatcttgaacaatattaacaca
attatatgtgaccttcagccacaacaggtgcacacattttacgaagcagttggatacatg
attggggcacagacagaccagactgtgcaggagcatctgatagaaaagtacatgttgctg
cccaaccaggtgtgggacagcatcattcagcaggcaacaaagaatgttgatattctaaag
gatcctgaaacagttaagcagcttggtagcattctgaaaaccaatgtacgagcatgtaaa
gctgttggccacccctttgtgattcagcttggaagaatttatttagatatgctgaatgtg
tacaagtgcctaagtgaaaatatttctgcagctattcaggctaatggtgagatggtaaca
aagcagcccttgattagaagtatgaggactgtaaaaagggaaactttaaaattaatttct
ggctgggtgagcaggtccaatgatccgcagatggtagctgaaaactttgttcctccgttg
ttggatgcagttctcatcgactaccagcggaatgtgccggccgctcgggaacccgaggtg
ctcagtaccatggctatcattgtcaacaagctggggggacacatcactgctgaaatacct
cagatcttcgatgctgtttttgagtgcacactaaacatgatcaacaaggattttgaagaa
tatcctgaacatagaacaaacttcttcttgctacttcaagctgtaaattctcactgcttc
ccagccttcctggccattccacctgcacagttcaaacttgtcctggattctattatttgg
gctttcaaacacacaatgagaaatgttgcagatacaggacttcagatcctttacaccctg
ttgcagaacgttgcacaggaggaaacggctgcccagagcttctatcagacgtatttctgc
gatatcctccagcacatcttctctgtggtcacagacacctctcacactgcaggtttgaca
atgcatgcatcaatccttgcctacatgttcaacttggtagaagagggaaagataagtact
cctttaaaccctggaaatccagtgaacaaccaaatgtttattcaggagtatgtggctaat
ctcctcaaatctgcatttcctcacctgcaagatgcccaggttaagctgttcgtaacagga
ctcttcagtttaaaccaggatattcctgccttcaaggaacacctaagggatttcctggtc
caaatcaaggaatttgcaggggaagacacatcagacttattcttggaggagagagaatca
gcccttcggcaggctcaagaggagaagcataaacttcagatgtctgtacctggcatcctt
aatccacatgaaattcctgaggagatgtgcgattaa

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