Taeniopygia guttata (zebra finch): 100220243
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Entry
100220243 CDS
T01082
Symbol
RHOT1
Name
(RefSeq) mitochondrial Rho GTPase 1 isoform X1
KO
K07870
mitochondrial Rho GTPase 1 [EC:3.6.5.-]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
100220243 (RHOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
tgu03029
]
100220243 (RHOT1)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
tgu04031
]
100220243 (RHOT1)
Mitochondrial biogenesis [BR:
tgu03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
100220243 (RHOT1)
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
100220243 (RHOT1)
GTP-binding proteins [BR:
tgu04031
]
Small (monomeric) G-proteins
Rho Family
Miro
100220243 (RHOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_assoc_2
EF_assoc_1
Ras
Roc
EF-hand_7
EF-hand_6
EF-hand_1
Arf
RsgA_GTPase
MMR_HSR1
SRPRB
AAA_22
EF-hand_8
Rad4
Motif
Other DBs
NCBI-GeneID:
100220243
NCBI-ProteinID:
XP_030143002
UniProt:
A0A674H8U0
LinkDB
All DBs
Position
18:complement(4163992..4189721)
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AA seq
707 aa
AA seq
DB search
MKKDVRILLVGEPRVGKTSLIMSLVSEEFPEEVPPRAEEITIPADVTPERVPTHIVDYSE
AEQSDEQLYHEISQANVICIVYAVNNKNSIDKVTSRWIPLINERTDKDSRLPLILVGNKS
DLVEYSSMETILPIMNQYTEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKE
MKPACIKALTRIFRISDQDNDGTLNDAELNFFQRICFNTPLAPQALEDVKNVVRKNLSDG
VADNGLTLKGFLFLHTLFIQRGRHETTWTVLRRFGYDDDLELTPEYLFPPLKIPPDCTTE
LNHHAYLFLQSIFDKHDLDRDCALSPEELKDLFKVFPYMPWGPDVNNTVCTNERGWITYQ
GFLSQWTLTTYLDVQRCLEYLGYLGYSILAEQESQASAITVTRDKKIDLQKKQTQRNVFR
CNVVGMKGCGKSGVLQALLGRNLIRQRQIRAEHKSYYAINTVYVYGQEKYLLLHDVSDSD
FLTDAETICDAVCLVYDVSNPKSFEYCARIFKQHFMDSRIPCLVVAAKSDLHEVRQEYSI
SPAEFCKKHKMPPPQAFTCNTADVPSKDIFVKLTTMAMYPHARLRCMCACNRCTFCICQN
FLNSDLLQSVKNKLFTAVLNRLRAYLAEVGAMLLADEESRIMQQVHAVHSVEDSIFMESS
LGPRLLEDRHVTQADLKSSTFWLRASFGATVFAVLGFAMYKALLKQR
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggacgtgcggatcctgctggtgggagaacccagagttgggaagacatcacta
attatgtctcttgtcagcgaggaattcccagaagaggttccaccccgagctgaagaaatc
accattccagccgatgtcactcctgaaagagtgccaacccacatagtggattattcagaa
gcagagcaaagtgatgagcagctttatcatgaaatatcacaggcaaatgtgatttgtata
gtctatgctgttaacaacaagaattctattgataaggtaacgagtcgatggattcctctc
atcaatgaaaggacagacaaagatagcaggttgcctcttatattagttggaaacaagtct
gatctagtggagtacagcagtatggaaactattcttcccattatgaatcaatatacagag
atagaaacgtgtgtagagtgttcagccaaaaacttgaagaatatatctgagctattttat
tatgcacagaaagctgttctacatcctacaggtcctctctattgcccagaggagaaagag
atgaaacctgcctgtattaaagcactgactcgcatttttagaatttctgatcaagataat
gatggtactctcaatgatgcagagctcaacttctttcagagaatttgttttaatacacca
ctggcacctcaagctttggaagacgtaaagaatgtagtcaggaaaaacctaagtgatgga
gttgcagataatggattgacattaaaaggttttctttttctacacacacttttcattcag
cgaggaaggcacgagacaacttggactgttttgcgccgctttggctacgacgatgacttg
gagcttacaccagagtacctgttccctcccctaaaaattccccctgactgcacaacagaa
ctaaatcatcatgcatacttgtttcttcaaagtatttttgataaacatgatttggataga
gattgtgctttatctcctgaagaattgaaagacttgttcaaggtcttcccttacatgcca
tggggacctgatgtgaacaacacagtttgtacaaatgaaagaggatggatcacataccaa
gggtttctctcgcagtggacactaaccacatacctggatgtgcagcgttgcctggagtac
ctgggttatttagggtactctatacttgcagaacaagaatctcaagcatcagcaattaca
gtgacaagagataaaaagatagacctccagaaaaaacagactcagcgaaatgtcttccga
tgcaatgttgttggaatgaaaggctgtgggaaaagtggagttcttcaagctcttcttgga
agaaatctaataagacagaggcaaatacgtgcagaacacaagtcttactatgccattaat
acagtctatgtatatggacaggaaaagtacttgctgctacatgatgtcagtgactcagac
tttttaactgatgctgagaccatatgcgatgctgtctgcctggtatatgatgtcagtaat
cctaaatcctttgagtactgtgccaggatttttaagcagcacttcatggacagcagaata
ccatgtttggtggtagctgccaagtccgacttgcatgaagttagacaggaatatagtatt
tctcctgctgaattctgcaaaaaacacaaaatgcctccaccccaagcctttacttgtaat
actgctgatgtgccgagtaaggatatctttgtaaaactgacaactatggcaatgtatccc
catgcccggttacgctgtatgtgcgcctgcaacaggtgtactttttgcatctgtcagaac
ttcctcaactcagacttgctgcaatctgtaaagaacaaactcttcactgcagttcttaac
aggttaagagcctacctagctgaggtgggggccatgctgttagcagacgaggagagcagg
attatgcagcaggtgcacgccgtccactctgtagaagattccatcttcatggagtcatct
cttggtccacgtttgcttgaagacaggcatgtgacacaagcagacctcaagagctcaacg
ttctggctccgagcaagttttggtgctactgtgtttgcagttttgggttttgccatgtac
aaagcactacttaagcagcgatga
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