Taeniopygia guttata (zebra finch): 100220323
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Entry
100220323 CDS
T01082
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100220323 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgu03019
]
100220323 (NDC1)
Messenger RNA biogenesis [BR:
tgu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100220323 (NDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
DUF6698
GP41
Motif
Other DBs
NCBI-GeneID:
100220323
NCBI-ProteinID:
XP_030134605
Ensembl:
ENSTGUG00000009308
UniProt:
H0ZGA0
LinkDB
All DBs
Position
8:4949473..4963846
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AA seq
673 aa
AA seq
DB search
MEAAAGGQRALLRQVLGWRVAAAVTWSVLLLPLCTAAFVVLSGLDPFHPLRWISNSFNDL
YTSYVIFCIFLMSVVIIIISIFNVEFYAVVPSIACSRLALIGKIIHPQQLIHSFVHAVMG
MLVAWCATVMTKGRFQFLAVPCTPSESPEDAVPQMCLNEHHLFFILSGAFLGYSYSLFFL
INNMNYLPFPIIQQYKYLRFRRSLPLLIKHSCVESLYFVRNFCVTYYFFGYIPKVWLCTT
MGLHTDSKLHPLDTLSGLLDLSLFYHTWLSGVFLLMTWYIAWLLFKIYATESHHFPIQPT
FAQETDQCLPKILNSNPPLLIKFLALQDLMLLSQYSPVRRQEVFSLSQPGGHPHNWTAIS
RECLSLLSDLTQRLIAQQEAAAANGRAKPPVGELKVPPQTPGAVGIEDVSFQSQRSNIVL
RPSMSPLVKQSLMPVKASPGSDVGSPFSSPALSYKMGVVDIKSPWHGAVQSPHVMRRGPK
LWTSVSDQQMNGSHHESSPMPSAARTGSEAVQPRFIFYTWLQNKQEQIKNFLLKRALIMY
FFSKHPEASIQAVFCDAQMHIWALEGLSHLVAASFTEDQFGVVQTTLPSILNTLLTLQEV
VDRHFKLPHVSSKPPRISGSLVDTSYKTLRFALRASLKTALYRITTVFGEHLNAVQVSTE
HKKRLQQFLDYKE
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcggcgggcgggcagcgggcgctgctccggcaggttctgggctggcgagtg
gccgccgccgtgacctggtccgtgctgctgctgcccctctgcaccgcggccttcgtcgtg
ctcagcggcctcgacccgttccacccgctgcgctggatctccaattctttcaatgatttg
tatacttcttatgtcatcttttgtatcttcctgatgtctgtggtgataataataataagc
atcttcaacgttgaattttatgcagttgtgccatcgatagcatgctctcgattagcactg
ataggaaagattattcaccctcagcaactcatccattcctttgttcatgctgtcatggga
atgctggttgcttggtgtgctacagtcatgacaaaagggagattccagtttcttgctgtg
ccctgcacaccttcagaaagcccagaagatgctgttcctcagatgtgcctaaatgagcat
cacctcttctttatactttctggagctttcttgggatacagctacagccttttctttctt
attaacaacatgaattatttgccatttccaatcatacagcaatacaagtatttgcgtttc
agaagatctttgcctctcctgataaaacacagctgtgtggaatcactatattttgttaga
aacttctgtgtcacatactacttttttggttatatcccaaaggtatggctatgtaccacg
atgggtcttcatacagacagtaaattacatcctcttgacactctgagtggcttattggat
ctctccttgttttaccatacctggctgagtggtgtgttccttctgatgacctggtacatt
gcttggctgctcttcaaaatctatgccacagagagtcatcattttcccattcaaccaaca
tttgctcaggagacagaccagtgcctgcctaaaatcttaaacagcaatcctcccctcctc
ataaagtttttagccttacaagacttgatgttactttcccagtattctcctgttagacga
caggaagtctttagccttagtcagccaggtgggcacccacacaactggactgcgatatcc
cgggagtgtttgagtctcctcagtgacctgacccagaggctgattgcacagcaggaagca
gcagcagcaaatgggagagcaaagccaccagtgggagagctgaaagtacctccacagact
ccaggagctgttgggatagaagacgtgtccttccagtcacagaggtccaacattgtcctc
agaccctccatgtctccactggttaagcaatccctgatgcctgtgaaggcatctcctggc
tctgatgttggttcacctttcagctctcctgctttaagttacaagatgggagttgtggat
ataaagtctccttggcatggagcagtccaaagtccccatgtcatgagaaggggaccaaag
ctgtggacgtcggtttcagatcagcaaatgaatggttcccatcatgaatcctccccaatg
ccctctgctgcaagaactggcagcgaggcagtgcagccaagatttattttttacacatgg
cttcagaacaagcaagaacagataaaaaacttcctgttgaaacgggcgttgataatgtat
ttcttcagcaagcacccagaagcctccatccaggctgtcttctgtgatgcccaaatgcac
atctgggctttggaaggcctgtctcacttggtagcagcctccttcactgaagaccagttt
ggagttgtccaaactacactgccatctatcctgaacacattactgactcttcaggaggta
gtagacagacatttcaaactgccacatgtttctagcaaacctccccggatttcagggagt
ctggtggacacatcctacaaaacactacgatttgcacttagagcatctctgaaaacagcc
ctgtaccggataactactgtctttggagaacacttgaatgctgtgcaagtgtctacagaa
cataagaaaagacttcaacaattcctggactacaaagaataa
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