Taeniopygia guttata (zebra finch): 100220325
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Entry
100220325 CDS
T01082
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tgu01002
]
100220325 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tgu04121
]
100220325 (USP42)
Enzymes [BR:
tgu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100220325 (USP42)
Peptidases and inhibitors [BR:
tgu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100220325 (USP42)
Ubiquitin system [BR:
tgu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100220325 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
100220325
NCBI-ProteinID:
XP_030140865
Ensembl:
ENSTGUG00000008831
LinkDB
All DBs
Position
14:complement(1316133..1334434)
Genome browser
AA seq
1334 aa
AA seq
DB search
MTIVNKPKSSKSKKSSSRRSDKSMKPRTKKMTSRTASLGRVPPTEDPNKVSVDKGPGGHI
YCRSSQKSKPFAQRDLVVNDGIAPPQRILFPPEKICMDWQQTQSVGVGLQNLGNTCFLNS
TLQCLTYTPPLANYMLSLEHTKSCHVEGFCMMCTMESHINQVLCCSNNAIKPTSVINGLK
RIGKHFHFGSQEDAHEFLCFTVDALQKACLNGSTKLDRSSQATTLIYQIFGGYLRSRVKC
LNCKAVSDTYEPFLDVTLDIKAVTSVTRALEQFVKPEQLDGENSYKCSKCKKMVPASKRY
TIHRSSNVLTISLKRFANFTGGKINKDVKYPEYLDLRAYMSQSIGEPLIYALYAVLVHSG
FNCNAGHYLCFIKAGNGLWYRMNDASVELSDIKTVLNQQAYVLFYIRRYDLTLGERAFYL
PTPSYPRSFLGQRGANSKQAAFMGPRLPPHMIKSSSRLNGNGPLKEDPSAVGVAVKRPSS
APPTACVQNWAISRPSMTDPSKTQKITISIHNKLPTRQAVPQAECPSSAREEEDLKPLPS
ATITNSSAAEPTSNLSTVSVATNVSKQEVPDEIFVEPAVNGNPKLCSDNMVPFGAEPSGK
SEESKGLFKRHCNIISSNGILIGKVVRTLHNSHSSCQNAEERSQHELPKIDSLNGAISLD
NEYKENGLKLDDSTCQVQPVKPSEIFFAKANGVLEAMPKPLSPDPQGILESLTYSQLNSL
SEEKSVSGPQKSSDNDGVTDTVVMEALFAYEESRKVPSKFSCEVEKLFTQSDSETIFTKE
EVAESIITKADNAHLNINGQHKVRKKSLDTEGEFLGQCESEDIRDKDKLRRSKEPEFISK
ENPLYIKGSPESKEKLGQISSIKPDIECSSKKLASLDITDKCQDTKDISNNYVEVPPVND
SSITKLDKVLESQFSRADEGPSNQICEDDGKHMKKNKKKIHDSKRTDKEHYRRKRENSDT
EEKERQTRNKSDDHSHRRRSSHSVETNKQSRHKQEYCSESKYRSSHSERNTLSNGRSSGK
YSRYRSRSRERTDPDRNRYYYSKGDRPWIRERYYQDEPRRWEKCRYYNDYYSSHGTRDGR
ERRSSHCDKDYDKSSQAYSRSHKDYHCKSRWAHSTLSREEDVHHFSSHRANFHHCSVPQQ
HSEKYSHERHTLPPVSAHSNFEDSSRENEKEKLRNGKRKYSHQEESGSDIEKKCRKTDDQ
RIKKYKKVKKKKKSKDKHREKDYKLYDLDCSVLHFDNDNRKHKKKKKKKKHDRKLKDLLE
YLDPRFQKKTWEKKEESRPPDDHLCEQYRNQGSKQPYKEEKPSGAGDSKKYSSMASTEYV
RDMELTDESLQYSD
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttaacaagccaaaatcttcaaagtctaaaaaatcttcttcaagacggtct
gacaaatctatgaaaccccgtactaaaaaaatgacgtctcgcactgcaagtttgggccgg
gtacctcctacagaagatccaaacaaagtctctgtggacaaaggtcctggggggcatatt
tattgtagatcatctcaaaaatcaaagccttttgcccaaagagatctagttgttaatgat
gggattgctccgccacaaagaattctttttccacctgagaaaatctgtatggattggcaa
caaacacaaagtgttggagttgggctgcagaacctcggcaacacatgtttccttaattct
actctccagtgtttgacctacacgcctcctcttgccaattacatgctttcacttgagcac
accaagtcatgtcatgtagaaggattctgtatgatgtgcacaatggaaagtcacatcaac
caggtcctgtgttgctctaataatgccatcaaacctacgtctgttatcaatggccttaaa
agaataggaaaacatttccactttggcagtcaagaggatgcacatgaattcttatgcttc
actgttgatgctttacagaaagcttgcttgaatggaagcaccaaattagacagatcttct
caagccaccacacttatttatcaaatatttggaggatatctaagatctcgagtaaagtgc
ttgaactgcaaagcagtgtcagatacatacgagccatttctcgacgttactttggatata
aaggcagttacatctgtcaccagagctctagaacaatttgtgaaaccggaacagctggat
ggtgaaaatagctataagtgtagcaagtgcaaaaagatggttccagcatcaaagagatac
acaatacatcgctcttcgaatgttctcacaatatcgctgaaaagatttgcaaattttaca
ggtggaaagatcaacaaggatgtaaaataccctgaatatttggatcttcgagcatatatg
tcccaatccattggagaacccctcatctatgctttatatgcagttcttgtacatagtggc
ttcaactgtaatgctggacactatctctgcttcataaaggctggtaatggactttggtac
cgaatgaatgatgcctcagtagagctttctgatatcaaaacagttctcaatcagcaagct
tacgtacttttttatatcaggcgctatgacctgacgctgggggaacgagccttttacctg
cccacaccctcctacccccgctccttcctgggccagcgcggggccaacagcaagcaggct
gccttcatgggacctcggcttcctccccacatgattaagagttccagtcgtttaaatgga
aatggacccttaaaagaggatcccagtgctgttggtgttgctgtaaaaaggccatcttca
gctccaccaacagcttgtgttcaaaactgggcaatttccaggccttcaatgacagaccct
tccaaaacgcagaagatcacgatcagcattcacaacaagctgcccacacggcaggcggtg
ccgcaggcggagtgtccaagcagcgctagggaggaggaggatctgaagccccttccttca
gccacaattacaaactcttctgcagcagagcctacctcaaacctctccacagtgtcagtt
gctactaatgtctccaagcaggaggttcctgatgaaatctttgttgagccagcagtgaat
ggaaaccctaagctctgttctgataacatggtccctttcggtgcagaaccttcaggaaaa
tccgaggagtcaaagggcttgttcaaaaggcactgcaacatcatatcttccaatggaatt
ctgattgggaaggtggtccgtacattgcataattcccattcatcctgtcagaatgcagaa
gaaagatcccagcatgagctgccaaaaattgattccctaaatggtgctattagtttagat
aatgaatataaagaaaatggactgaaacttgatgattccacttgccaagtccaacctgtt
aaaccttctgagattttcttcgctaaagcaaatggagtgcttgaagcgatgcctaaacct
ttgtcaccagatcctcaaggtatcttagaatcccttacatacagccagttgaacagcttg
tcggaggaaaagagtgtctctggacctcagaaatcttctgacaatgatggagttacagat
actgtagtgatggaagcactgtttgcctatgaagaatccaggaaggttccttccaaattt
agctgtgaggttgagaaactttttactcaatcagattctgaaaccatttttaccaaagaa
gaagttgctgaaagtattataacaaaagctgataatgcacatctcaatatcaatggtcag
cacaaggttaggaaaaaatccttggatactgaaggtgaattccttggacagtgtgagtct
gaagacatcagagataaagacaaactaagaagatcaaaagaacctgaattcatttcaaaa
gaaaatcctttgtacatcaaaggatctcctgagagcaaagagaaattagggcaaatttcc
tctataaagcctgacattgaatgtagttctaaaaaacttgcatctctagatattacagat
aaatgccaagatacaaaggacatttctaataactatgtagaggtaccacctgttaatgac
tcttctattacaaagctggataaagtattggaaagtcaattttctagagcagacgaggga
ccgagtaatcaaatatgtgaagatgatggcaaacatatgaaaaaaaataagaaaaaaatc
catgactctaaaagaactgacaaagagcactaccggaggaagagagaaaactcggacact
gaggagaaggagaggcaaaccagaaacaaatcagatgatcattcccacaggaggaggagc
tctcacagtgtggaaacaaacaagcagagccgtcataagcaggagtattgcagtgagagc
aagtacagatcctcccacagtgaaagaaacactctcagcaatggtaggagctcaggaaag
tattcccgttacagatcccgaagcagagaaaggacagatccagacagaaacaggtattat
tattccaaaggagacaggccttggattagagaaagatactaccaagatgaaccacggaga
tgggaaaagtgcaggtactacaatgattattattcctcccatggaacaagggatggcagg
gagaggaggtcctctcattgtgataaagactatgacaaatcgagccaggcttacagcagg
tcacacaaggattatcactgcaaaagcagatgggctcacagcacactctcccgagaggag
gatgtgcatcacttcagcagccacagagcaaacttccaccattgttcagtacctcagcag
cactcggaaaaatactcccatgaaaggcacacacttccaccagtgtcagctcactcaaat
tttgaggactcttcccgggaaaatgaaaaagaaaaactaagaaatggcaaaagaaaatac
tcccaccaagaagaaagtggaagtgacatagaaaagaaatgccgaaagacagatgaccaa
agaatcaaaaagtataagaaggtcaagaagaaaaagaagtccaaagataaacatcgagag
aaggattacaaactttatgatttggattgctctgtgctccactttgacaatgacaatcgc
aaacataagaaaaagaagaaaaagaagaagcacgacaggaaactgaaagacttattggaa
tatttagatcctcgtttccagaagaaaacgtgggagaagaaggaagaatcccgtcctcca
gatgaccatttatgtgagcaatacagaaaccagggcagtaaacaaccctacaaggaagag
aagccttctggtgcaggtgacagcaagaaatacagctccatggcatccactgagtatgtc
agagatatggagctgactgatgaaagccttcaatactcagactga
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