Taeniopygia guttata (zebra finch): 100220408
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Entry
100220408 CDS
T01082
Symbol
ABCA7
Name
(RefSeq) phospholipid-transporting ATPase ABCA7 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu02010
ABC transporters
tgu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100220408 (ABCA7)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100220408 (ABCA7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tgu02000
]
100220408 (ABCA7)
Transporters [BR:
tgu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
100220408 (ABCA7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
DUF4162
AAA_23
AAA_22
AAA_29
Motif
Other DBs
NCBI-GeneID:
100220408
NCBI-ProteinID:
XP_030112804
LinkDB
All DBs
Position
28:5140818..5156173
Genome browser
AA seq
2248 aa
AA seq
DB search
MAVGTQLGLLLWKNFTYRRRQRIQLAIEILWPLFLFLILVSVRRSHPPFKQHECHFPNKA
LPSAGTLPWLQGIICNLNNPCFRHPTAGEAPGVVGNFHGSIISRLLSEARQVLLRGHGQR
LLRGLARLLPALRRLRDSGNQRSALPVREYLREDETFSRFLRTNTSLPPALVDELMGARL
SPRIFSPASLRLPLKALVCEASVLGGFLVAGDADSTRSLQQGLCALPSSQLRAMEGSFLS
QMDFPRLLTEQLSSELGGIAGTVEALGSFLRDAASLMEEVSSMTSLAELRQEIVGLRAPN
TSTGTFTAVSRIACGHPEGGGLRIPSLNWYEDNDVKAFLDRNSSEQRPVASGSTSPFCRE
LLRSLESSPLSQIFWRGIKPLFVGKILYTPPGPGPDSVMAEVNRTFRELAVLGELGGAWQ
ELGPRIYTILNSSLEMQVLQDLLLAPSTAQLLDGFLNGTSWKLPELVTFLTGPAGGPGLT
WHQVYADVDTVLSTLSQFMECVCLDKIEAVATEEQLVARALELLEEQQFWAAVVFQPPIN
ATAPGLPPHVRYKIRMDIDDVTRTNKIKDRFWDPGPAADPFSDLRYVWGGFVYIQDLVEQ
AVVRVQTGAAPRTGVYVQQMPYPCYVDDMFLRVLNRSLPLFMILAWIYSVAMIIKGVVHE
KETRLKETMKTMGLSSGILWLSWFLSSFIPFLLSSALLVLILKLGNILPYSDPAVIFLFL
STFSVATISQCFLISTFFPRANLASACGGIIYFSLYLPYVLCVAWRDYITFPIRVLVSLL
SPVAFGFGCDYFSLHEEQGVGIQWHNLAASPVPGDPYSFGAAMGLLLLDAVLYGLATWYL
EGVCPGQYGIPKPWNFPFLKSYWFGESPSSGHSLYHASPHTAPQVLVEEPPADLQPGVSI
RNLVKVYGSSGHAAVNGLSLDFYEGQITSFLGHNGAGKTTTMSILTGLLPPTSGTAYILG
WDIRSDIDSIRKSMGMCPQHNVLFDILTVEEHIWFYGRLKGRSEQQVQEEMEQLLQDTGL
PHKRREQTRNLSGGMQRKLSVAIAFVGGSRVVILDEPTAGVDPFSRRSIWELLLKYRTGR
TIILSTHYMDEAELLGDRTAIISQGRLCCCGSPLFLKARLGTGYHLTLVKRDRSGTGGTT
GTVPGATKRDGSDSEHSSDTGLGSERGSDASAVDVAQLSALIQKLVPGSRLVEDIGHEVL
FVLPYSGARDGAFGELFRELDTRLGELGVSSYGISDTTLEEIFLKVAEDTALDTDPTGTM
KGAVPGEMGDGDVADGEMAKGARRAEEPRETDLLRGAAGPLCGRVRGWALTCRQLRALFT
KRMLHARRSTRGFFAQIVLPAVFVCIALLFSLIVPPFGRYPPLQLQPWMYGQQFTFVSND
APGDPDTARLLEALLAEPGFGTKCMKEEGKATGLCPPASHPDGFSAPSAPPSLLEVLQRG
NWTRAQPSPPCQCSGPGAHRMLPECPEGAGGLPPPQVQRGTGDILQNLTGRNISDYLVKT
YPQIIRQELRNKKWVNEQRYGGFSLGAGSSQALPSAAEVDQAVLELRVLLNITLGSPSDR
LLANLSRFIEGLDARRNIKVWFNNKGWHAMVSFLNVASNGLLRARLPPGTDPTRFGITAT
NHPLNLTKEQLSEAALMATSVDVLVSICVIFAMSFIPASFVVFLIEERVSKAKHLQFVSG
MKPITYWLGNFAWDMCNYLVPALLVILIFLCFQQESYVSSANLPSLVLLLLLYGWSITPL
MYPASFLFSIPSTAYVALTCINLFIGINGSVATFVLELFVDQNLNDINRVLKKVFLIFPH
FCLGRGLIDMVKNQAMADAFERFGDKRFVSPLSWDLAGKNMFAMAIEGIVFFLFTLLLQY
HRFFLRLGPRALELPSLGDEDQDVARERVRVGSISPHGHLLLLKDLTKVYRRRKAPAVDR
LCVAIPPGECFGLLGVNGAGKTSTFKMLTGDTEVTLGEAWLKGHSVLTDLQSVHQHMGYC
PQFDAITDLLTGREHLEFYSRLRGIPEEETPRVAQWGITALGLGPHADRPAGKYSGGNKR
KLSTAIALLGCPPVVFLDEPTTGMDPQARRFLWEHILGVIRDGRSVVLTSHSMEECEALC
TRMAIMVNGRFRCLGSVQHLKNRFGDGYTVVVRAGGPGPAAVQRLLQQHFPGIVLREQHG
GLLQYHLPARVASLATVFSLLAAHRGPCHIEDYSVSQTTLDQVFMHFAQEQSDGDAGEVT
APRQDAAPSPRGMLSRFLEDDSYQESAV
NT seq
6747 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgggcacccagctggggctgctgctctggaagaacttcacctaccgccggcgg
cagcggatccagctggctatcgagatcctgtggcccctcttcctcttccttatcttggtc
tcggtgcggcgatcccacccgcccttcaagcagcacgagtgccactttcccaacaaggcg
ctgccgtctgcgggaaccctgccctggctgcagggcatcatctgcaacttgaacaacccc
tgctttcggcaccccaccgcgggagaggcccctggcgtggtgggcaacttccatggctcc
atcatctcccgtctcctgagcgaagcccggcaggtcctgctccgcgggcacgggcagcgg
ctcctgcgcggcttggcgcggctcctgcccgccctgcgccggctccgggacagcgggaac
cagcggagcgctctgccggtgcgggagtacttgagagaggacgagaccttctcccggttc
ctgcggaccaacacgtccctgcccccggcgctggtggatgagctgatgggggctcggctc
agtccccgcatcttctccccggcgagccttcgcctcccgctaaaggccctggtctgcgag
gcctcggtcctgggggggttcctggtggccggcgacgccgactccacccggagcctgcag
caaggactctgcgcgctgcccagctcccagctccgtgccatggagggctccttcctctcc
cagatggacttcccacggctgctgacggagcagctgagctcagagttgggcggaatcgct
ggcaccgtggaagctttgggcagtttcctgcgggatgcagcatccctgatggaggaggtc
tcctccatgaccagcctggccgagctgcgtcaggagattgtggggctgagggcccccaac
accagcacgggcaccttcacagccgtgtcacgcatcgcctgtggccaccccgagggcggg
gggctcaggatcccctccctcaactggtacgaggacaatgatgtcaaagccttcctggac
cgtaacagctcggagcagagacccgtggcctcaggcagcaccagtcctttctgccgggag
ctgctccgcagcctggagtccagccccctctcacagatcttctggcgggggatcaagccc
ctctttgtggggaagatcctgtacaccccacctgggcctggccccgacagtgtcatggct
gaggtgaatcggaccttccgggagctggcggtgctgggggagctggggggtgcctggcag
gagctgggaccccgaatttacaccatcctcaacagtagcctggagatgcaggtgctccag
gatctgctgctggccccgagcacagcccagctcctggatgggttcctcaatggcacctcc
tggaagctaccagagctggtcacattcctgactgggccagcaggaggaccaggcctcacc
tggcaccaggtttatgctgatgtggacacagtcctgagcacgctgtcacagttcatggag
tgtgtctgccttgacaagatcgaggcagtggccaccgaggagcagctggtagcccgagcc
ctggagctgctggaggagcagcagttttgggcagcagtggtcttccagccccccatcaat
gccacagcccccggactgccaccccatgtccgctacaaaatccgcatggacatcgatgac
gtcacgagaaccaacaagatcaaggacaggttttgggacccaggccccgcagctgacccc
ttcagtgacctgcgctacgtctgggggggctttgtctacattcaggacctggtggagcag
gcggtggtgcgggtgcagactggggctgccccacggacgggggtctacgtccagcagatg
ccctacccctgctatgtggacgatatgttcttgagggtcctgaaccgctcgctgcctctt
ttcatgatactggcctggatctactcagtggccatgatcatcaagggggtggtgcacgag
aaggagacacgtctcaaggagaccatgaagaccatggggctgagcagcgggatcctgtgg
ctcagctggttcctcagcagcttcatccccttcctcctcagctctgccctccttgtcctc
atcctcaagctgggaaacatcctgccctacagcgacccagcagtcatcttcctcttcctc
agcaccttctccgtggccaccatcagccagtgcttcctcatcagcaccttcttcccccgt
gccaacctggcctcggcgtgcggtggcatcatttacttctcgctgtacttgccttacgtg
ctgtgcgtcgcctggcgcgactacatcaccttccccatccgtgtcctcgtgagcctgctg
tcccccgtggccttcggcttcggctgcgattacttctccctccacgaggagcagggggtg
ggcatccagtggcacaacctggctgccagccccgtgccaggagacccctacagcttcggt
gcagccatggggctgctgctgctggacgctgtcctctacggcctggccacctggtacctc
gagggggtctgcccaggtcagtacgggatccccaagccctggaatttccccttcctgaag
agctactggtttggagagtcaccctcatctgggcactccctgtaccacgccagcccccac
actgcaccccaggtgctggtggaggagccgcctgccgacctccagcccggcgtctccatc
cgcaacctggtgaaggtctatggcagcagcggccatgccgctgtcaatgggctgagcctg
gacttctacgaggggcagatcacatccttcctgggccacaacggcgctggaaagaccacc
accatgtccatcctgactggcctcctgccccccacctcgggcactgcctatatcctgggc
tgggacatccgctctgacatcgacagcatccgcaaatccatggggatgtgtccccagcac
aacgtgctctttgacatcctgacggtggaggagcacatctggttctacgggcggctgaag
gggcgctcggagcagcaggtgcaggaggagatggagcagctgctgcaggacacggggctg
ccccacaagcgccgggagcagaccaggaacctctctggtggcatgcagaggaagctctcg
gtggccattgccttcgtgggtggctcccgggtggtcatcctggacgagcccacggccggc
gtcgaccccttctcccgccgcagcatctgggagctgctgctcaagtaccgcacaggccgc
accatcatcctgtccacccactacatggacgaggcggagctgctgggggaccgcacggcc
atcatctcccagggccggctctgctgctgcgggtcccccctcttcctcaaggccaggctt
ggcaccggctaccacctcaccctggtgaagcgggacaggagcggcacaggcggcaccact
ggcaccgtccccggtgccaccaaaagggacggcagtgactcggagcacagcagtgacaca
ggcctgggcagcgagcggggcagtgacgccagcgccgtggatgtggcccagctgtcggcg
ctgatccagaagctggtccctggctcccggctggtggaggacattgggcacgaggtgctc
tttgtcctgccctacagcggggccagggatggggccttcggggagcttttccgcgagctg
gacacacgcctgggggaactgggggtctccagctacggcatctctgacaccaccctggaa
gagatcttcctgaaggttgccgaggacacagcgctggacactgaccccacgggcaccatg
aaaggagcagtccctggcgagatgggggatggggatgtggccgatggagagatggccaaa
ggagcccggcgagcggaggagccccgggagacagacctgctgcggggggcagcggggccg
ctgtgcggcagggtgaggggctgggcgctcacctgccgccagctccgcgctctcttcacc
aagaggatgctccacgcccggcgcagcacccgcgggttcttcgcgcagatcgtcctcccc
gccgtcttcgtgtgcatcgcgctgctcttcagcctcatcgtgccgcccttcgggaggtac
ccaccgctgcagctccagccctggatgtacgggcagcagttcacctttgtcagcaacgac
gccccgggagacccggacactgcccggctgctggaggcgctcctggccgagcctggcttc
ggcaccaagtgcatgaaggaagaggggaaggcgacagggctgtgcccaccagcttcccac
cccgatggcttctcagccccctcagcccccccatccctgctggaagtgctgcagcgtggg
aactggacacgggcccagccatcccccccgtgtcagtgcagcgggccaggggcacacagg
atgctgcctgagtgtcctgagggggccggggggctcccacctccccaggtgcagaggggc
acaggggacatccttcagaacctgacgggcaggaacatctctgactacctggtgaagacc
tatccccagatcatccgtcaggagctgaggaacaagaagtgggtgaatgagcagaggtac
ggtggcttctccctgggtgctggcagctcccaggccctgccgtcagcagcagaggtggat
caggcagtgctggagctccgggtgctgctcaacatcaccctgggcagcccctcggatcgg
ctcctggccaacctcagccgcttcatcgagggtttggatgcccgcaggaatatcaaggtc
tggttcaacaacaagggctggcacgccatggtctccttcctcaacgtggccagcaatggg
ctgctgcgagcccggctgccccccggcaccgaccccacacgcttcggcatcacggccacc
aaccaccccctgaacctcaccaaggagcagctctccgaggccgccctgatggccacctct
gtggacgtgctggtgtccatctgcgtgatcttcgccatgtccttcatcccggccagcttc
gtcgtcttcctcatcgaggagcgagtcagcaaggccaaacaccttcagtttgtcagcggg
atgaagcccatcacctactggctgggcaactttgcctgggacatgtgcaactacctggtc
cccgccctgctggtcatcctcatcttcctctgcttccagcaggaatcctacgtgtcctca
gccaacctgccctccctggtgctgctgctgctgctctacggatggtccatcacccccctg
atgtatccagcctccttcctcttcagcatccccagcaccgcctacgtggccctgacctgc
atcaacctcttcatcggcatcaacggcagcgtggccacctttgtgctggagctcttcgtg
gaccagaacctcaatgacatcaaccgagtcctgaagaaggttttcctcatcttcccccac
ttctgcttgggccgaggcctcattgacatggtgaagaaccaggcaatggctgatgccttt
gagaggtttggggacaagcgcttcgtgtcccccctgtcctgggacctggcagggaagaac
atgtttgccatggccatcgagggcatcgtcttcttcctcttcaccctcctgctgcagtac
caccgcttcttcctgcgcctgggcccacgggctctggagctgccctcactgggagatgag
gaccaggacgtggccagggagcgggtgagggtgggcagcatctccccacacggccacctc
ctgcttctgaaggacctgaccaaggtgtatcggcgcaggaaggctccggccgtggaccgg
ctctgcgtggccatcccccccggagagtgctttggcctcctgggggtgaacggggccggg
aaaacgtccaccttcaagatgctgacaggggacacagaggtgacgctgggggaggcctgg
ttgaaggggcacagcgtgctcaccgacctccagtctgtccaccagcacatggggtactgt
ccccagtttgacgccatcacggacctgctgacagggcgggagcacctggagttctacagc
cgcctgcgtgggatcccggaggaggagacccccagggtggctcagtggggcatcactgct
ctggggctgggcccgcacgcggaccgcccggcgggcaagtacagcgggggcaacaaacgc
aagctgtccacagccatcgccctcctcggctgtccccctgtggttttcctggatgagccc
acaacggggatggacccacaagcccggaggttcctgtgggagcacatccttggcgttatc
cgggacggccgatccgtggtgctcacgtcccacagcatggaggagtgcgaggcgctctgc
accaggatggccatcatggtcaacggccgcttccgctgcctgggcagcgtccagcacctc
aagaacaggtttggggacggctacacggtggtggtgcgggcggggggccctggcccagcg
gcggtgcagcgcctgctgcagcagcacttccccggcatcgtgctgcgggagcagcacggg
gggctgctgcagtaccacctgcccgcccgtgtcgcctccctggccaccgtcttcagcctt
ctggccgcccaccgtggcccctgccacatcgaggactactccgtgtcccagaccacgctg
gaccaggtcttcatgcactttgcccaggagcagagcgatggggacgctggggaggtcaca
gccccaaggcaagatgcggcccccagccccagggggatgctgagcaggttcctggaggat
gacagctaccaggagagcgctgtctga
DBGET
integrated database retrieval system
