Taeniopygia guttata (zebra finch): 100220437 Help Entry 100220437         CDS       T01082                                  Symbol COL3A1 Name (RefSeq) collagen alpha-1(III) chain   KO K19720   collagen type III alpha Organism tgu  Taeniopygia guttata (zebra finch) Pathway tgu04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:tgu00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     100220437 (COL3A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:tgu00536]     100220437 (COL3A1) Glycosaminoglycan binding proteins [BR:tgu00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    100220437 (COL3A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  100220437 NCBI-ProteinID:  XP_030133720 LinkDB All DBs Position 7:complement(25510582..25559936) Genome browser AA seq 1462 aa AA seqDB search MMSSVQKVTLLILAVFQPSVILAQQVVTGCTHLGQAYADRDVWKPEPCQICVCDSGSVLC DDIICDDQELDCPNPEIPFGECCPVCPQTTTPPPKTPGVVSQGPKGDPGSPGIPGRNGPP GPPGQPGSPGAPGPPGICQSCPSISGGSFSPQYDSYDVKAGGAGIGYPQPISGFPGPPGP SGPPGPPGHAGPPGSAGYQGSPGEPGQPGPPGPPGPVGMIGPVGPPGKDGEPGRPGRNGD RGIPGLPGHKGHPGMPGMPGMKGQRGFDGKDGAKGDSGAPGPKGETGLPGVNGAPGQPGP RGPAGERGRPGNPGGPGAHGKDGSPGAAGPPGPPGPPGTAGFPGSPGFKGEAGPPGPAGV SGSPGERGEPGPQGNAGPPGPQGPPGRAGSPGNKGEMGPSGIPGAPGLPGGRGLPGPPGA SGNPGAKGSPGDPGKDGAKGDPGPKGERGENGTPGAPGPPGEEGKRGANGEPGQNGVPGT PGERGSPGFRGLPGSNGLPGEKGPAGERGSPGPPGPSGPAGERGQDGGPGLPGMRGLPGI PGSPGSDGKPGPPGNQGESGRSGPPGPPGPRGQPGVMGFPGPKGNEGAPGKNGERGPGGP PGPPGLAGKNGDVGLPGPPGPTGASGERGEPGPAGPPGLQGLPGGPGPAGENGKPGEPGP KGDIGGPGFPGPKGENGIPGERGAQGPPGPPGTRGGPGPAGTEGAKGPPGPPGPPGGTGL PGLQGMPGERGASGSPGPKGERGEPGGKGADGLPGARGERGNVGPIGPPGPAGPPGDKGE TGPAGAPGPMGSRGGPGERGEQGLPGPAGFPGAPGQNGEPGGKGERGPPGLRGEAGPPGA AGPQGGPGAPGPPGPQGIKGDRGSPGGPGAAGFPGARGLPGPPGNNGSPGPPGNAGPAGK DGPPGPPGSSGAPGGPGPAGIRGEPGAPGEKGPPGARGERGAPGEPGPQGIVGGRGNTGL PGLRGPSGPPGMAGAKGEDGKPGTNGIPGERGAPGPQGPIGQRGLPGEPGRDGNPGSDGL PGRDGSPGGKGDRGESGSPGPPGPPGHPGPAGNAGAPGKSGERGFQGPPGPPGSTGPAGA RGPAGPQGPRGDKGEPGERGSNGIKGHRGFPGTPGLPGPPGPLGPQGAIGGPGASGARGP PGPAGPPGKDGTSGYPGPIGPPGPRGSRGESGPAGPPGQPGLPGPAGPPGPCCGAGAIAG ASTMEKGPILGYGYEYRDEPKENDINLGDIISSMKSINNQIENIISPDGSQKNPARNCRD LKFCHPELKSGEYWVDPNQGCKMDAIKVYCNMETGETCLNANPRTVPKKNWWTNANSGKK HVWFGESMNGGFQFSYGDPELPEDVSEVQLAFLRILSSRASQNITYHCKNSIAYMDHDNG NVKKALKLMSSTESEIKAEGNSKFTYAVLEDGCTKHTGEWGKTVFEYRTRKTMRLPVVDI APLDIGGPDQEFGVDIGPVCFL NT seq 4389 nt NT seq  +upstreamnt  +downstreamnt atgatgagctctgtgcaaaaagtaactttgctaattcttgccgtgtttcaaccctcagtt attttggcacaacaagtcgtcacaggatgtacccatcttgggcaggcttatgctgacagg gatgtttggaaaccagagccatgccaaatctgcgtgtgcgactcgggatctgttctctgc gatgacatcatctgtgatgatcaggagctggactgccccaacccagagattccttttgga gagtgctgtccagtgtgtccacaaacaacaacaccacctccaaaaactcctggagtagtc agccaaggccccaaaggagaccctggttctcctggaattccaggcagaaatggtccacct ggcccaccaggacagccagggagccctggagctcctgggccccctggaatctgccagtcg tgtcccagtataagtggaggtagtttttctccacagtatgactcctatgatgtgaaggct ggtggagctggtatcgggtacccacaacccattagtggctttccaggaccccctggcccc agtggtccccctggcccacctggtcatgcaggtccccctggctctgctggataccagggc tcccctggagagccaggacagcccggccctcccggtcctccaggtcctgttggaatgata ggcccagttggtccaccaggaaaagatggagaaccaggaagaccaggcaggaatggagat cgcggaatccctggattaccgggtcacaaaggacaccctgggatgcctgggatgcctggg atgaaaggccaacgaggttttgatggaaaagatggagccaaaggtgacagcggtgctcct ggtccaaagggtgaaactggtcttcctggagtaaatggagcaccaggccaaccgggacca agaggtccagctggagaaagaggaagacctgggaatcccggtggccctggtgcccatggc aaagatggatctccaggagcagcaggcccacctggtcccccaggtccccctggaactgca ggatttccaggctctccaggttttaagggggaagctggtcctcctggtcctgctggtgtt agtggtagtcctggagagaggggagaacctggtcctcagggcaatgctgggccacccggg cctcagggccctcctggaagagctggaagccctggcaacaagggtgaaatgggaccttct ggtattcctggtgctcctggtctgccaggaggccgtggtcttccaggtcctccaggtgca agtggaaaccctggggcaaaaggcagtccgggagaccctggtaaggatggtgcaaaagga gacccaggaccaaaaggcgagcgtggtgaaaacggcaccccaggtgctcctgggcctcct ggtgaggaagggaaaagaggtgcaaatggagagcctgggcagaacggagtacctggtacc cctggagagaggggctcccctggcttccgtggcttacctggtagcaacggacttcccggc gaaaagggtcctgcaggtgagcgtggcagcccaggtccccctggccccagcggacctgca ggagagcgtggacaagacggaggcccaggtcttcctggaatgagaggcttgcccggaatt ccaggaagccctggaagcgatgggaaacctggccctcccggcaatcagggtgaatctgga cgctctggcccacctggccctccaggtccacgtggccagccaggtgtgatgggtttccct ggtcctaagggcaatgagggtgcaccaggcaagaatggagaaagaggccctggtggacca cctggaccacctggtcttgctgggaagaatggcgatgttggccttccaggtcctccagga cctacaggtgcttctggggagagaggagaaccaggaccagcaggcccacctggcctccag ggattgcctggtggaccaggaccagctggagagaacggaaagcctggagaaccagggcca aaaggtgatattggaggacctggattcccaggccctaagggtgaaaatggtatcccagga gaacgtggtgcacaaggtcctccaggacctcctggaacaagaggtggaccaggtcctgct ggcacagaaggtgccaagggtcctcctggtccacctggtccccctggaggcacaggactg cctggcttacagggaatgccaggagaaagaggagcttctggaagccctggaccaaaaggg gagaggggagaacctggtggtaaaggtgctgatggccttcctggtgcaagaggagagaga ggcaacgtaggtcccatcggtcctcctggtcctgctggcccacctggagataagggagag actggcccagcaggtgcccctggcccgatgggttcccgtggaggtcctggtgaacgagga gaacaaggtcttcctgggcctgctggcttccctggagcccctggccaaaatggggaacct ggtgggaaaggagaaagaggcccccctggtctaagaggagaggccggaccccctggagca gctggtccacagggcggccctggtgccccaggtccacctggtcctcaaggaataaaggga gaccgtggatctcctggcgggcctggtgctgctggtttcccaggtgctcgtggtctacct ggtccccctggtaacaatggtagtccaggtccccctggcaacgcaggccctgcaggcaag gatgggcctcccggaccccccggcagttctggtgctcctggaggtccaggacctgctggc atcaggggtgagcccggcgctccaggagaaaaagggcctccaggagcccgaggagaaagg ggggcaccaggtgagccaggtcctcaaggcatcgttggcggccgagggaacacgggtctg ccaggcctgcgtggccccagcggcccacccgggatggcaggggccaagggtgaagatggc aaaccaggcaccaacggtatcccaggagaacgcggcgctcctggtccccaaggtcctatt ggacaaagaggcttacctggagagcctggcagagatggtaaccctggctctgatggcttg cctggacgcgatggatccccaggaggcaaaggtgaccgtggtgaaagtggctctcctggc cctccaggaccccctggccaccctggaccagcaggtaatgctggtgcacctggaaaatct ggtgaaagaggatttcagggtccacctggccctcctggctctactggtcctgctggtgct cgtggtcctgccggtcctcaaggtcctcgtggtgataaaggtgaacctggtgaacgaggc agcaatggcataaagggccacagagggtttcctggtacccctggtctccctggtcctcct ggtcctctgggtccacaaggtgcaattggaggtccaggagcttcaggtgcaaggggtccc ccaggaccagctgggccacctggaaaagatggtaccagtggctacccaggtccaattggg cctcccggcccccgtggttccagaggtgaaagcggccctgctggtccaccagggcagcct ggtcttcctggtcctgctggacctcctggcccatgttgtggtgctggtgctatagctggc gcgagtactatggagaaaggtccgattttagggtatggctatgaatatcgagatgagcct aaggaaaacgatatcaatctgggtgacatcatatcttcaatgaaatcaattaacaaccag attgaaaacatcattagtcctgatgggtcccagaagaatccagctcgtaactgccgagac ctgaaattctgccatcctgagctcaagagtggagagtactgggttgatcctaaccaaggc tgcaagatggatgctattaaagtgtactgcaatatggaaactggtgaaacctgcctcaat gccaaccccaggactgtgccaaagaaaaattggtggaccaatgcaaacagtggaaagaaa cacgtttggtttggagagtctatgaatggaggcttccagttcagctatggagatcctgag cttcctgaggatgtctctgaagttcagctggccttcctgcgcatcctctccagccgtgcc tcccaaaacatcacctaccactgcaagaacagcattgcctacatggaccacgacaatggg aatgttaaaaaagccctgaaactcatgagctctacagaaagtgagatcaaggctgaagga aacagcaaattcacatatgctgttctggaagatggctgcactaaacacactggtgagtgg ggtaaaacagttttcgaatacaggacgcgcaagacaatgaggttgccggtggttgatatt gcaccattagatattggtggtcctgatcaggaatttggcgtggacattggcccagtctgc ttcttataa

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