Taeniopygia guttata (zebra finch): 100220549
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Entry
100220549 CDS
T01082
Symbol
WDR11
Name
(RefSeq) WD repeat-containing protein 11 isoform X1
KO
K24260
WD repeat-containing protein 11
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tgu04131
]
100220549 (WDR11)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tgu03037
]
100220549 (WDR11)
Membrane trafficking [BR:
tgu04131
]
Endosome - Lysosome transport
Others
Others
100220549 (WDR11)
Cilium and associated proteins [BR:
tgu03037
]
Other cilia and associated proteins
Other cilium assembly proteins
100220549 (WDR11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR11_2nd
Beta-prop_WDR11_1st
TPR_WDR11
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR36-Utp21_1st
WD40_Prp19
Beta-prop_EML_2
ANAPC4_WD40
EIF3I
WD40_WDHD1_1st
WDR55
Beta-prop_WDR35_TULP_N
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR41
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_RIG_1st
Beta-prop_RSE1_2nd
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
WD40_like
RAB3GAP2_N
DUF3856
Beta-prop_BBS7
Rrn6_beta-prop
TPR_GEMI5
Motif
Other DBs
NCBI-GeneID:
100220549
NCBI-ProteinID:
XP_030132407
Ensembl:
ENSTGUG00000011203
LinkDB
All DBs
Position
6:29919684..29954564
Genome browser
AA seq
1220 aa
AA seq
DB search
MQRFTVNIKLPARTLTGALSAPNRGAADWGWQGLIAYGCHSLVLVVDANSAQTLQVLERH
KASVVKVKWAKENYHHNIGSPYSLRLASADATGKIIVWDVATGAARCEIQEHSKPIQDMQ
WLWNQDASRDLLLAVHPPNYIVLWNADTGTKLWKKSYAENILSFSFDPFDPSHLALLTSE
GIVFISDFSPSKAPASSGKKVYISSPHSSPSHNKLAAATGAKKALDKVKILISNEKPSAE
SVTLNDCLQLSYLPSKRNYMLLLYPREILILDLEVNQTVGVIAIERTGVPFIQVIPCFQR
DGLFCLHENGCITLRVRRSNCSITATPNEEPDPEPAQELVYDLRSQCDAIRVTKTVRPFS
MVCCPVNENAAALIVSDGRVMIWELKSSISGRNVRNSSSSASPLYSPVSFCGIPVGALQN
KLPDLSLDNMIAGQGASTGEELRNSFLQEVHLKFLLTGLLSGLPLPPFAIRMCPPLTTKN
IKQYEPILAVGTSNGSVLVFHLTSGLLHKELSIHSCEVKGIEWISLTGFISFATSTPNNL
GLVRNELQLVDLPTGRSVAFRGERGNDEPAIEMIKVSHLKQYLAVVFKDKPLEIWDVRTC
TLLREMSKFPTATALEWSPSHNLKSLRKKQLAAREAMARQTVASDTEVSSVESSVISLLQ
EAESKSELSQNISAREHFVFTGADGQVYHLTVEGNSVKDSARIPPDGSMGSITCIAWKGD
ILVLGDVDGNLNFWDLKARVSRGIPTHRSWVKKIRFAPGKGNQKLLAMYNDGVEIWDSKE
VQMVSSLRSGRNVNFRILDVDWCTSDKVVLASDDGCIRVLDLSMKPSCFRMDEQDLIEPV
WCPYLLVPRASLALKAFLLHQPWDEKYSLDIMDIDYPENENIKNLLQEQLNSLSNDIKKL
LLDPDFTLLQRCLLVARLYGDESELHFWTIAAHYLHSLCQEKPAKPDTAVLHEQLLNPLD
ICYDVLCENSYFQKFQLERVNLQEVKRSTYDHTRKCADQLLLLGQTDRAVQLLLETSSEN
AHYYCDSLKACLVTTVTSSGPSQSTIKLVATNMIANGKLAEGVQLLCLIDKAADACRYLQ
TYGEWNRAAWLAKVRLGSEECADVLRRWVDHLCSPQVNQKSKAILVLLSLGCFTKVAEML
HSMRYFDRAALFVEACLKYGAFEVNDDTNKLIHAVYADYARSLKLLGFKEGAALFASKAG
ESGKELLSELKQPKEEVTQE
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgcttcaccgtcaacatcaagctgccggcgcggaccctgacgggcgccctgagc
gcgcccaaccgcggcgcggcggactggggctggcaaggtttgattgcatatggatgtcat
tccctcgtgctcgtggtggatgccaactctgctcagaccttgcaggttttggaaagacac
aaagccagtgttgtcaaggttaaatgggctaaggaaaattaccaccacaatattggctct
ccatattccttacgtttggcttctgcggatgccacagggaaaatcatcgtgtgggatgtg
gcaacaggagcagctcgctgtgaaatacaggagcattcaaagcccatccaagacatgcag
tggctgtggaatcaagatgcttccagagatttgctgcttgcagttcacccaccaaattat
attgtattgtggaatgcagacacaggcaccaaactttggaagaaaagttatgctgaaaat
atcctgtctttttcatttgatccctttgatccctcacatttagctttgctcaccagtgaa
ggaatagtgttcatctctgacttctctccttccaaagctcctgccagctcagggaagaaa
gtttacatctccagtcctcattccagtccttctcacaacaagctggctgctgctacaggg
gccaaaaaggcccttgataaagtaaaaatcctaatcagtaatgaaaaaccaagtgctgaa
tctgtaacactcaacgactgtcttcagttgtcatatttgccttccaaaagaaactacatg
ctcttactgtatcccagggaaattctgattcttgacttggaagtgaatcagacagtgggt
gtgattgccattgaaaggacaggggtgcctttcatacaggtaatcccttgttttcagagg
gatgggttattttgcctgcatgaaaatggttgtatcaccttaagggttcgcagatccaac
tgcagcatcactgcaactccaaatgaggagccagatccagagccagctcaggagctggtt
tatgatttaagaagtcagtgtgatgccatcagggtgaccaaaacagttcgacccttcagc
atggtgtgctgcccagtgaacgagaatgctgcagctctcatagtcagtgatggcagggtg
atgatctgggaattaaaatccagcatttctggcagaaatgtgcgcaacagcagttccagt
gcttcacctctgtattctccagtctccttctgtggaatccctgtaggagcattgcaaaat
aaacttccagacctctcattagacaacatgattgcagggcagggtgcaagcactggagaa
gagttaaggaattcatttctgcaggaagtgcacctgaaattcctgctgacaggacttctg
tcagggctgcctctgcctccctttgccatccgcatgtgcccgcccctcacaaccaaaaac
atcaaacagtatgagcccatccttgctgttggtacaagcaatggctctgtcctggtgttt
cacctcacaagtggactcctccacaaagagttaagcatccattcctgtgaagtcaaggga
attgagtggatcagcttgactggcttcatttcctttgccacatcaacacccaacaatctg
gggctggtcaggaatgagctgcagctggtggaccttcccacaggcaggagtgttgcattc
cgtggggagcgaggcaacgatgagccagccatcgaaatgataaaggtgtctcatttgaag
cagtacctagctgtggtatttaaagacaaaccactggagatctgggatgtcagaacttgc
actctgctcagagaaatgtctaaattccctacagccactgctctggagtggtcaccttcc
cataacttaaagagcctgaggaagaagcagttggcagccagggaggccatggcccggcag
acagtggcatcagacactgaagtcagcagtgtggaatcctctgtgatcagcttgttgcag
gaagctgaaagtaaatcagagctgagccagaacatctctgccagggagcactttgtgttt
acaggtgctgatgggcaggtttatcatctcacagtagagggaaactcagtaaaagacagt
gcaagaattcctccagatggaagtatgggtagcattacttgtattgcctggaaaggggat
atcctggtccttggagatgttgatggaaacttaaacttctgggatttgaaggctagagta
tccagggggattcctactcaccggagctgggtgaaaaaaatacggtttgccccggggaaa
ggaaatcaaaaacttcttgcaatgtacaacgatggggtagaaatttgggattcaaaagag
gtacaaatggtgagcagtttaaggagcgggaggaacgtgaatttccggatcctggacgtg
gactggtgcacgtcagacaaggtggtgctggcatcagatgatggatgcatccgagtgctg
gacctgtccatgaagccctcgtgtttcaggatggatgagcaggatttaatagaacctgtc
tggtgtccctacctgcttgttccaagggcttcattagctttaaaagcattcctgctgcat
caaccttgggatgagaaatattctctagatattatggacattgattatccagagaatgaa
aatattaaaaaccttcttcaagagcagttgaattcattgtccaatgacataaagaaactt
ctgcttgatccagattttactctcctgcagagatgtctcctggttgccagactgtatggg
gacgaatctgaactgcatttctggactattgctgcccactatttgcacagcttatgccag
gaaaagcctgcaaaaccagacacagctgtccttcacgagcagctgcttaatcctctggat
atatgctatgatgtgctgtgtgaaaattcttacttccagaaattccagctggaaagggta
aatctccaggaagtgaagagatcaacatatgatcataccaggaaatgtgctgatcagctt
cttctgttgggccagactgacagagcagtgcaactactgctggaaaccagttcagagaat
gcacattattactgtgattccctcaaagcttgcctggtcacaactgtcacctcgtcaggg
ccatctcaaagcaccattaaactggtagcaaccaacatgatagccaatggaaagcttgca
gagggggtgcagctgctgtgtctgattgacaaagctgcagacgcctgtcgctacctgcag
acctacggcgagtggaaccgtgcagcgtggctggccaaggtgcggctgggctccgaggag
tgcgcggacgtgctgcgccgctgggtcgaccacctctgctccccacaggtcaaccagaaa
tccaaggccattcttgtcctcctgtctcttggctgcttcacaaaagttgcagagatgtta
cacagtatgaggtactttgatagagcagctttatttgtagaagcttgtctgaagtacggg
gcatttgaagttaatgatgatacaaataaactgatccatgctgtgtatgcagactatgcc
agaagcttgaagctcctgggctttaaggagggagctgctctctttgcctccaaagcagga
gaaagtgggaaggagcttctgagtgaactcaagcagccgaaggaggaggtgacacaggag
tga
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