Taeniopygia guttata (zebra finch): 100220635
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Entry
100220635 CDS
T01082
Symbol
HDAC9
Name
(RefSeq) histone deacetylase 9 isoform X10
KO
K11409
histone deacetylase 9 [EC:
3.5.1.98
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tgu03036
]
100220635 (HDAC9)
Enzymes [BR:
tgu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
100220635 (HDAC9)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
100220635 (HDAC9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
100220635
NCBI-ProteinID:
XP_030120638
LinkDB
All DBs
Position
2:29848563..30306827
Genome browser
AA seq
1087 aa
AA seq
DB search
MHSMISSVDVKSEVPVGLEPISPLDLRTDLRMMVPMVDPIMREKQLQQELLLIQQQQQIQ
KQLLIAEFQKQHENLTRQHQAQLQEHIKLQQELLAIKQQQELLEKEQKLEQQRQEQELER
HRREQQLPPLRGKERGRERAVASTEVKQKLQEFLLSKSATKDSPANGKNHSMSRHPKLWY
TAAHHTSLDQSSPPLSGASPPYKYTLPGAQDAKDDFPLRKTASEPNLKVRSRLKQKVTER
RSSPLLRRKDGNVSSFKKRLFEVTESSVSSSSPGSGPSSPSNGPTSSTTETETSILPSNI
QAEHLVSQQRLLIQDESVNLLSLYTSPSLPNITLGLPAIQPQISGVRECSRKSNSFPLLQ
SSSSFKEKQKGETPSLRQGVALAGQYGGNIPPSSTHPHIALEGKPNSSHQALLQHLLLKE
QMRQQKLLVTGAVPLHPQSPLAAKERVSPGIRAAHKLPRHRPLNRTQSAPLPQSTLAQLV
IQQQHQQFLEKQKQYQQQIHMNKMLSKSIEQLKQPGSHLEEAEEELHGDHSMQEERAPSS
SASVRAESSSAGVDERIGQQVGAVKVKEEPLDSDEDVQTQQMESGEQAAFMQQEFLAHRH
VHQLQIYQAQMATVGMAGSDKHRPLSRTPSSPTDSTLPHPDMDQPSQHVYTTGVVYDSLM
LKHQCMCGNYTNHPEHAGRIQSIWSRLQETGLLNKCERIRGRKASLEEIQLVHSEHHSLL
YGTSPLNRQKLDPRKLLGSVSQKLFSLLPCGGLGVDSDTVWNELHSAGAARMAVGCVIEL
AARVASRELKNGFAVVRPPGHHAEESTAMGFCFFNSIAITAKYLRDKLNIGKILIVDLDV
HHGNGTQQAFYADPSILYVSLHRYDEGNFFPGSGAPNEVGSGPGEGYNINIAWTGGLDPP
MGDVEYLTAFRTVIMPAANEFDPEIVLVSAGFDAVEGHDPPLGGYKVTAKCFGHLTKQLL
KLADGRVVLALEGGHDLTAICDASEACINALLGNELEPLPEDIVHQIPNMNAIASLKKTT
EIQSKYWKSVEPYSVPVDCALAESQKQEREETETVSAMASLSVDVEQCIPQEGSRAAGEP
MEEEPAL
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgcacagtatgatcagctcagtggatgtgaagtcggaggttcccgtgggcctggagccg
atctcacccttagacttgcgaacggatctcaggatgatggttcccatggtggacccgatt
atgcgcgaaaagcagctccagcaggagctgctcctgatccagcagcaacagcagattcag
aaacaactgctcattgcagagttccagaagcagcatgaaaatctgacccgccagcatcag
gcccagctccaggagcacattaagttacaacaggaactactagccattaaacaacagcaa
gaactccttgaaaaagagcagaaactggagcagcaaagacaagagcaggaactggagagg
catcgcagggagcaacagcttcctcccctccgaggcaaagaaagaggacgagaaagggca
gtggccagtacagaagtgaagcagaaacttcaagagttcctgttaagtaaatcagctaca
aaagactctccagcaaatgggaagaatcattccatgagccgtcaccccaagctctggtac
acggctgcccaccatacctcactggatcaaagctctccacccctgagtggggcctcgcca
ccatacaaatatactttaccaggagcacaggatgctaaggatgattttccacttcgtaaa
acggcttcagagcccaatttgaaggtacgttcaagattaaaacaaaaggtgacagaaagg
agaagcagtcctttacttaggaggaaggatggaaatgtcagttcattcaagaagcgtctt
ttcgaggtgacagaatcctcagtcagtagcagctcccctggatcaggtcccagttcccca
agcaatggtccgaccagcagtacaacagaaactgaaacttcaattttgccatctaatatt
caagctgagcacctggtttcccagcaacgcctcttaatacaggatgaatcagtgaacttg
ttgagtctgtacacatccccttctctgcccaacattaccttgggccttccagcaatacaa
cctcaaatcagtggagtcagggagtgctccaggaaaagtaatagcttcccactactacag
tcttcgtcgtcattcaaagaaaagcagaagggggagaccccatcactaagacaaggagtg
gccttggccggacagtatggaggaaacattcctccatcatcaactcatcctcacattgct
ttggaaggaaagccaaacagcagccaccaagctctcttgcagcatctgttactgaaagaa
caaatgagacagcaaaaacttcttgtgactggagcggttcctcttcatccacagtctcct
ttagcagcaaaggagagagtctcacctggcataagagctgcccacaaactgcctcgtcac
aggccactgaacagaacccagtcagctcctcttcctcagagtaccttggcccagctggtc
atccagcagcaacatcagcaatttttggagaagcagaagcagtaccagcagcagatccac
atgaataagatgctctctaagtccattgagcagctcaagcagcctggcagtcacctggag
gaagctgaagaagagcttcatggagatcactcgatgcaggaagagcgagctccctccagc
agtgccagcgttagggctgagagcagcagtgctggtgtggatgaaagaataggacagcag
gtgggggctgtgaaagtcaaagaggagccactggacagtgatgaggatgttcaaacccag
caaatggaatctggggagcaagctgcttttatgcaacaggagttcctggcacatcggcat
gtccaccagttgcaaatctaccaggctcagatggctacagttggcatggcaggatcagat
aaacatcgaccactttccaggaccccatcttcccccactgactccacattacctcaccca
gacatggaccagcccagccagcatgtctacacaactggtgtcgtgtatgacagtctgatg
ctgaagcaccagtgcatgtgtgggaactacactaatcaccccgaacacgctggaagaatc
caaagcatctggtcaaggctgcaagaaactgggttgctaaacaagtgcgagcgaattcga
ggtcgaaaagccagtctggaggaaatacagctggttcactctgaacatcattcactgctg
tatggcaccagcccactgaacagacagaagctggaccccaggaaactcctaggaagcgtg
tctcaaaaactcttttccttgttgccttgtgggggacttggggtggacagtgacaccgtt
tggaacgagctgcactcggccggggcggcacgcatggcggtgggctgtgtcatcgagctg
gcggcccgcgtggcctcccgggagctgaagaatggctttgctgttgtaaggcccccaggc
catcatgctgaagaatcaacagccatggggttctgcttttttaattcgattgcaattact
gccaaatacttgagagacaagctaaatataggcaagatattgattgtagatctggatgtt
caccatggcaacggtacacagcaggctttttatgctgaccccagcatcctgtatgtttcc
ctccatcgctatgatgaaggcaacttcttccccggcagtggagccccaaatgaggttgga
agtggccctggtgaagggtataacataaatattgcttggacaggtggcttggatcctcct
atgggtgatgttgagtatctcacagcattcagaactgtgattatgccagctgccaatgag
tttgatccagaaattgtcctggtgtcagcaggattcgatgctgtggaaggccacgaccct
ccgctgggcgggtacaaagtcacagctaaatgttttggtcacctgaccaagcaattgctg
aagctggcggacggccgcgtggtgctggcgctggagggaggccatgaccttactgccatc
tgtgacgcctctgaagcctgtataaatgccctcctaggaaatgagctggagcctctcccg
gaagatattgtgcaccaaatccccaatatgaatgcaatagcttctttaaaaaagaccact
gaaattcaaagcaagtactggaagtcagtggaaccatactctgtgccagtggattgtgct
ctggctgagtctcagaagcaagagagggaggagacagaaacagtatcagctatggcctct
ctgtcagtggatgttgagcagtgtattcctcaggaaggcagcagagctgctggtgagccc
atggaagaagagccagccttgtga
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integrated database retrieval system
