Taeniopygia guttata (zebra finch): 100220672
Help
Entry
100220672 CDS
T01082
Symbol
RBBP6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tgu04121
]
100220672 (RBBP6)
Enzymes [BR:
tgu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100220672 (RBBP6)
Ubiquitin system [BR:
tgu04121
]
Ubiquitin ligases (E3)
U-box type E3
100220672 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
100220672
NCBI-ProteinID:
XP_030140834
Ensembl:
ENSTGUG00000006185
UniProt:
A0A674GS09
LinkDB
All DBs
Position
14:7705717..7733646
Genome browser
AA seq
1787 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLSDLKRQIMGREKLKAADCDLQITNAQTKEEYTDD
SALIPKNSSVIVRRIPIGGVKATSKTYVMTPKSHKILETTFRSRTEPVSGTSKAIDDSSA
SISLAQLTKTANLAEANASEEDKIKAMMTQSGHEYDPVNYMKKPVGPPPPSYTCFRCGKP
GHYIKNCPTNGDKNFESVPRIKKSTGIPRSFMMEVKDPNTKGAMLTNTGKYAIPTIDAEA
YAIGKKEKPPFLPEEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTA
LLESEEHTCPTCHQTDVSPDALIANKFLRQAVNNFKNETGYTKRLRKIQQQQQQQQLPPP
PPPPPPPLMRQTITRTLQPLMRPAMARQQDPLMIPLASLASRSALSSLGPGPSMAAGLPV
NPSSVVVSDLPPAVSLSLRGEKPDGPFRDADAVLPPALMTAAELSKSSPLSISSLLEEKG
YQVPVLRQPAIPSLLGPQGQSIPTTGHPMRAGALRRPGWELSNRGRPHSDRAQRTQAPSL
PASAPVFVPVPPPPLYPPPPHALPLPPGVPPPQFPPQFPPGQPPSAGYTVPPPGYPPAPA
NMSSAWVPTAVPAAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEFTNDFAKEL
MEYKKIQKERRRSFSRSKSPYSASSYSRSSYTYSKSRSGSSRSRSYSRSFSRSHSRSYSR
SPPYQRRGKGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPVFRGQSPTKRTVPQGD
AEREYFNRYREVPPYDMKAYYGRSVDFRDPFEKERYREWERNYREWYEKFYKGYAVGAQP
RPPVNRENFSPERFGPPGTRRENSPYARGRREEYPAGQSHRNRSVAGSYPEKPGRESHGI
KDPTKSKEKEVENPLGDGKGNKHKKHRKRRKGDENEAFPNVELLEGARKPREPVPTEDAK
TDSLFMLPSRDDATPVRDEPMEADSIAFKPVSEKEKKEKDKPKAKVEKTKRKVEVAAAPK
KDSVAKPAKASQEKVDPDREKSPRTEPPVKKVKEELPKTDSVKTSSSQKDEKALGTPRKA
HPKVAKDHPETRPAKEEKAKKEHPKEAKAEKPSSKEEKSKKPAEKSKLSDAKLEKRKRKA
EEKADKEHEASSAKAYKLETAELKTSPKGKAEPEGEKGERTPEKDKAAFLNNPSKKIKLN
RETGKKIVSGENVPPGKEAVEKPEPSSSKVKAEKTKGKARRKVTAAEGTSSTLVDYTSTS
STGGSPVRKPEEKPDTKRTVIKTLEEYNNDITAPAEDVIIMIQVPQSKWDKDDFESEEED
IKSTTQAPPTVGKPASVIKPVSAKAPNLLKHTEKETEPLEKIQKAAKEASYESTQHDAKS
SKSSVSSEKGKTKDRDHSLSDKDSSEKRKSSVQPEKEHSERAAEQGNGKTVSQSSKDGRS
SEKHDSGRGSAAKDFTPNRDKKSDHDGGREHSSSKRRDEKSESARRKESPSRIRDSTAVQ
KSKPREERVEPPKKGPAEAKRSSYSPPRERKPAEHKAVHDPKRPAEEHKAPDKNPGKEKE
KEKEKEKHVPEVKSNKEKEAGGNKPPVKQDSPEVTVEKENVAAPSDKGAAKPKPPASSAA
RLSSDLTRETDEAAFVPDYNESDSESNVSAKDEEAAGKTPKEAKEKAADKVKEEAAAPAP
AEQPEVGRSQSQSSPSVSRSRSHSPSESQTRSHSSSASSGESQDSKKKKKKKEKKKHKKH
KKHKKHKKHVGNETELEKSQKHKHKKKKSKKSKDKEKDDQKVKSVTT
NT seq
5364 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgcgtgcattacaagttctcctccaagctcaactatgacacggtcaccttcgac
gggctgcacatctccctgagcgacctcaagcgccagatcatgggccgggagaagctgaag
gcggccgactgcgacctgcagatcaccaacgcgcagaccaaagaagaatacactgatgat
agtgctctgattcccaagaactcatctgtgattgtgaggagaatccccattggaggagtt
aaagcgaccagcaaaacatacgttatgactcctaaatcgcacaaaatcctagaaactact
ttcagaagtcgaactgagccagtgagtggaacatcaaaagcaattgatgactcttctgca
tctatttctctggcccagcttactaagactgccaatctggctgaagccaatgcttccgag
gaggataaaataaaagctatgatgacacagtctggccatgaatatgatccagtcaattac
atgaagaaacccgtggggccacctccaccctcttacacctgttttcgctgtggcaaacct
gggcactacataaagaactgtccaacaaatggggacaaaaatttcgagtctgttcccaga
attaaaaaaagcacaggaattccaagaagttttatgatggaggtgaaggaccccaacacg
aagggtgccatgctgaccaacactgggaaatatgcaattccaaccatagatgcggaagct
tatgctatcggaaagaaggagaagcctcccttcctacctgaggagccgtcctcctcttca
gaagaagatgatcctattccagatgagctgttgtgtctcatttgtaaggatataatgacg
gatgcggttgttattccctgctgtggaaacagttactgtgatgaatgtattagaacagca
ctgctggagtctgaggaacacacatgccctacctgccatcagactgatgtttctcctgat
gctttaatcgccaacaagtttctgcgccaggctgtcaacaacttcaaaaacgaaaccggt
tacacaaagaggctccggaagattcagcagcagcagcagcagcagcagctgccgccgccg
ccgcccccgcccccgccgcccctgatgcggcagaccataacgcgcaccctgcagccgctg
atgcggccggccatggcccggcagcaggacccgctcatgatcccgctggcctccctggcc
tcccgctccgccctctcgtccttgggccccgggccgtccatggcagctgggctgcccgtc
aatccgtcttctgtggttgtctctgacctccctccagcagtgtccctctctctccgcggg
gaaaagccagatggaccttttcgtgatgctgatgctgttttgcctcctgctctgatgact
gctgccgagctttccaaatcttcccctttgtcaatcagcagtttgttggaagagaagggc
tatcaggttcctgtactgagacaaccagcgataccaagtcttctgggccctcaaggacaa
tcgatacctacaactggtcatccaatgagagctggtgcacttcgcaggccaggctgggag
ctttcaaatcgaggacgcccgcacagtgaccgtgcccaaaggactcaggccccatcactg
ccagcatcagcaccagtctttgtgcctgtgcctccacctcccttgtatcctccaccaccc
catgctcttcctcttcctccgggggtaccaccaccacagtttcctcctcagtttccacct
gggcagcctccatccgctgggtacactgtcccccctcccggatatcccccagctcctgca
aacatgtcatcagcttgggtcccaacagcagtgccagcggctcattcaaacaccatccca
acgacacaagcacctcctctctctagggaggagttttacagagagcaacggaggcttaaa
gaggaggaaaagaaaaagtccaaacttgatgagtttacaaatgattttgctaaggaattg
atggaatataaaaagattcaaaaggagcgtaggcgttcgttttccaggtccaagtctccc
tatagtgcttcatcttactctagaagctcatacacctactccaagtcacgctcaggttcg
tcgcgctcccgctcctactcgcgctccttcagccgctcccattcccgctcctactcgcgg
tcgccgccctatcagagacgaggcaaagggaagagtcggaactaccgctcccgctcccgc
tcccatggctatcaccgctcccgctcccgctcgcccccgtacaggcgctaccactcccgc
tccaggtctccagtgttccggggccagtcccctaccaaacggacggtcccgcagggcgac
gccgagcgcgagtacttcaaccgctacagagaggtgcccccgtacgacatgaaggcttac
tatggccgctcggtggacttcagagatccctttgagaaggagagatacagagagtgggag
aggaactacagagagtggtacgagaagttttacaagggctatgccgtgggcgctcagcca
cggcctcctgtgaacagagagaacttctctccagaacggtttggcccacctgggaccaga
cgagagaattcaccatatgctcggggacggagggaggagtatcctgctgggcagagccac
aggaatcgtagtgtagctggaagctatcctgaaaagcctgggagagagagccatggcatc
aaagatcctacaaaatcaaaagagaaggaggtggaaaatccactgggagatggcaaaggc
aataaacataaaaaacaccggaagagaagaaaaggggatgagaatgaagcatttcccaat
gttgagctgttagaaggggcacgaaaaccaagagagccagttccaacagaagatgctaaa
acagactctctattcatgctgccaagcagggatgatgccacccctgtaagggatgagccc
atggaagcggattccattgctttcaagccagtgtcggaaaaggagaaaaaagagaaggat
aagccaaaagcaaaggttgagaaaacaaagcggaaagtagaagtggcagctgctccaaag
aaagacagcgtagcaaaaccagctaaagcttcccaggaaaaggtggaccccgatcgcgaa
aaatctcctcgaacggaacctcctgtaaaaaaagtcaaggaagagctgccaaagacagac
agtgttaaaacctcttcctcgcagaaggatgagaaggctcttggtacaccacggaaggct
catcccaaagtggcaaaggatcacccagaaaccagaccagccaaggaggagaaggcaaag
aaagaacatcctaaagaagccaaggcagagaagccctccagcaaggaggagaagtcaaag
aaacctgctgagaaaagtaaactttctgatgccaaacttgagaaaaggaaaagaaaagca
gaggaaaaggctgataaagaacatgaggcctcttctgcaaaggcctataaactcgaaact
gcagaattgaaaacatcacccaaggggaaggctgagcccgagggggagaaaggagagcgg
accccagaaaaggataaagctgcttttcttaataacccgtccaaaaagattaaacttaac
cgagaaactggaaaaaagattgtgagtggagaaaacgtgccacctggaaaagaagctgtg
gagaagcctgagcccagcagcagcaaagttaaagcagaaaagacaaagggaaaagccaga
aggaaagtgacagcagctgagggcactagctcgactcttgtggattacaccagcacaagt
tccactggaggaagccctgtcaggaagcctgaggagaagccagacaccaaacgaactgtc
attaagaccctggaggagtataacaacgacataacagcccctgctgaggatgtcattatc
atgatccaggtccctcagtccaagtgggataaagatgactttgagtctgaagaagaagac
atcaaatccaccacccaggcacccccaactgtaggaaaacccgccagtgttatcaaacct
gtgagtgcaaaggcaccaaacctcctcaaacacaccgaaaaggagacagagcctctggag
aaaatacagaaagctgcaaaagaggcaagttatgaaagcacccaacatgatgccaagagt
tcaaaaagttctgtgtcgagtgaaaaaggtaaaaccaaagaccgggatcattctttgtca
gacaaggacagttctgagaagaggaagagcagtgttcagccagaaaaagagcattcagaa
cgtgcagctgaacaaggaaatggaaaaactgtatctcagtcttctaaagatggcagatct
tcagagaaacatgacagtggccgtggctccgctgccaaggacttcactcccaaccgagac
aagaagtctgaccacgatggtggcagggagcattcgagttccaagcgcagagatgagaag
agcgaatcggcacgcaggaaagagtccccatcccggatcagagactccacagcggtgcag
aagagcaagccgagagaggagcgcgtggagccacccaaaaagggccctgcggaggccaag
cggagcagctacagccccccgcgggagcgcaagcccgctgagcacaaagctgtgcacgac
cccaagcgccccgctgaggagcacaaagccccggataaaaacccaggcaaagagaaggag
aaagagaaggaaaaggagaagcatgtaccggaagtcaagagcaataaggagaaagaggca
ggtgggaataaaccaccagtgaaacaggactcgccagaagttacagtggagaaggagaac
gtggcggctccgagcgataaaggcgcggcaaagccgaagccgccggcgagcagtgccgcg
cgcctctcgtctgacctcacccgcgagaccgacgaggccgccttcgtgccagactacaac
gagagcgacagcgagagcaacgtgtctgcaaaggacgaggaggctgcagggaaaacgccc
aaagaggcgaaggaaaaggctgcggataaggtgaaggaggaggcagcggccccggctccc
gccgagcagcccgaggtgggcaggagccagagccagagcagccccagcgtcagccgcagc
cgcagccacagcccctccgagagccagacacggagccacagcagcagcgccagctcaggg
gagagccaggacagcaagaaaaagaaaaagaagaaagagaagaagaagcacaagaagcac
aagaaacataagaagcataagaaacatgtgggaaatgaaacagaattggaaaagagccaa
aaacacaaacacaagaagaaaaaatcgaagaagagcaaagataaagagaaagacgaccaa
aaagtgaaatctgtcacgacataa
DBGET
integrated database retrieval system
