KEGG   Taeniopygia guttata (zebra finch): 100220703
Entry
100220703         CDS       T01082                                 
Symbol
NTN1
Name
(RefSeq) netrin-1
  KO
K06843  netrin 1
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu04517  IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    100220703 (NTN1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:tgu00536]
    100220703 (NTN1)
Glycosaminoglycan binding proteins [BR:tgu00536]
 Heparan sulfate / Heparin
  Axon guidance molecules
   100220703 (NTN1)
SSDB
Motif
Pfam: Laminin_N NTR EGF_laminin EGF_LMN_ATRN
Other DBs
NCBI-GeneID: 100220703
NCBI-ProteinID: XP_030143181
LinkDB
Position
18:4869210..4946181
AA seq 606 aa
MARRGAEAPLALLLAAAWLAQPLRGGYHGVNMFAVQSAQPDPCYDEHGLPRRCIPDFVNS
AFGKEVKVSSTCGKPPSRYCVVTEKGEEQVRTCHLCNASDPKRAHPPSFLTDLNNPHNLT
CWQSDSYVQYPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIHKSMDYGKTWVPFQFYS
TQCRKMYNKPSRAAITKQNEQEAVCTDSHTDVRPLSGGLIAFSTLDGRPTAHDFDNSPVL
QDWVTATDIRVTFSRLHTFGDESEDDSELARDSYFYAVSDLQVGGRCKCNGHASRCVRDR
DDSLVCDCKHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELFK
LSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLSKPISHRKACKECDCHPVGAAGQTCNQ
TTGQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPAAPPTTAASSAEEPADCDSYCKA
SKGKLKINMKKYCKKDYAVQIHILKAEKNADWWKFTVNIISVYKQGSNRIRRGDQTLWIH
SKDIACKCPKIKPMKKYLLLGNNEDSPDQSGIIADKSSLVIQWRDTWARRLRKFQQREKK
GKCKKA
NT seq 1821 nt   +upstreamnt  +downstreamnt
atggcgcggaggggagcggaggcgccgctggccctgctgctggcggcggcgtggctggcg
cagcccctgcgcggcggctaccacggcgtgaacatgttcgccgtgcagagcgcccagccc
gacccctgctacgacgagcacgggctgccccgccgctgcatccccgacttcgtcaactcg
gccttcgggaaggaggtgaaggtgtccagcacctgcgggaagccgccgtcgcggtactgc
gtggtgacggagaagggcgaggagcaggtccgcacctgccacctctgcaacgcctccgac
cccaagcgcgcccacccgccctccttcctcaccgacctcaacaacccgcacaacctgacc
tgctggcagtccgacagctacgtccagtacccccacaacgtcaccctcaccctgtccctc
ggcaagaaattcgaggtgacctacgtcagcctgcagttctgctcgccgcgccccgagtcc
atggccatccacaagtccatggactacggcaagacctgggtgcctttccagttctactcc
acgcagtgccgcaagatgtacaacaagccgagccgcgccgccatcacgaagcagaacgag
caggaggcggtgtgcaccgactcgcacaccgacgtgcggcccctctccggcggcctcatc
gccttcagcaccctggacggccgccccaccgcccacgacttcgacaactcgcccgtgctg
caggactgggtgacggccaccgacatcagggtgaccttcagccgcctgcacaccttcggc
gacgagagcgaggacgactccgagctggcccgcgactcctacttctacgccgtgtccgac
ctgcaggtcggcgggcgctgcaagtgcaacgggcacgcgtcgcgctgcgtccgggaccgc
gacgacagcttggtgtgcgactgcaagcacaacacggccgggcccgagtgcgaccgctgc
aagcccttccactacgaccggccctggcagcgagcgacggcccgggaggccaacgagtgc
gtggcctgcaactgcaacctgcacgcgcggcgctgccgcttcaacatggagctgttcaag
ctgtcggggcgcaagagcggcggcgtgtgcctcaactgccggcacaacacggcgggcagg
cactgccactactgcaaggagggcttctaccgcgacctcagcaagcccatctcccaccgc
aaggcctgcaaagagtgtgactgtcaccccgtgggtgccgccggccagacctgcaaccag
accacgggccagtgtccctgcaaggacggcgtcaccggcatcacctgcaaccgctgcgcc
aagggctaccagcagagccgctcccccatcgccccctgcataaagatcccggctgctcca
cccaccacggctgccagcagcgccgaggagcccgcagattgtgactcgtactgcaaagcc
tccaaggggaagctgaagatcaacatgaagaagtactgtaagaaagactatgctgtccag
atccacatcctgaaagcagaaaagaacgcggactggtggaagttcacggtgaacatcatc
tccgtctacaagcaaggcagcaaccgcatccggcgtggagaccagaccctgtggatccac
tccaaggacatcgcctgcaagtgccccaaaatcaagcccatgaagaagtatttgctgctg
ggcaacaacgaggactctcccgaccagagcggcatcattgcggacaaaagcagcctggtg
atccagtggcgggacacgtgggcccggcggctgcggaagttccagcagcgcgagaagaag
ggcaagtgtaagaaagcctaa

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