Taeniopygia guttata (zebra finch): 100220703
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Entry
100220703 CDS
T01082
Symbol
NTN1
Name
(RefSeq) netrin-1
KO
K06843
netrin 1
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100220703 (NTN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tgu00536
]
100220703 (NTN1)
Glycosaminoglycan binding proteins [BR:
tgu00536
]
Heparan sulfate / Heparin
Axon guidance molecules
100220703 (NTN1)
SSDB
Ortholog
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Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
Motif
Other DBs
NCBI-GeneID:
100220703
NCBI-ProteinID:
XP_030143181
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All DBs
Position
18:4869210..4946181
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AA seq
606 aa
AA seq
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MARRGAEAPLALLLAAAWLAQPLRGGYHGVNMFAVQSAQPDPCYDEHGLPRRCIPDFVNS
AFGKEVKVSSTCGKPPSRYCVVTEKGEEQVRTCHLCNASDPKRAHPPSFLTDLNNPHNLT
CWQSDSYVQYPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIHKSMDYGKTWVPFQFYS
TQCRKMYNKPSRAAITKQNEQEAVCTDSHTDVRPLSGGLIAFSTLDGRPTAHDFDNSPVL
QDWVTATDIRVTFSRLHTFGDESEDDSELARDSYFYAVSDLQVGGRCKCNGHASRCVRDR
DDSLVCDCKHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELFK
LSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLSKPISHRKACKECDCHPVGAAGQTCNQ
TTGQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPAAPPTTAASSAEEPADCDSYCKA
SKGKLKINMKKYCKKDYAVQIHILKAEKNADWWKFTVNIISVYKQGSNRIRRGDQTLWIH
SKDIACKCPKIKPMKKYLLLGNNEDSPDQSGIIADKSSLVIQWRDTWARRLRKFQQREKK
GKCKKA
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggaggggagcggaggcgccgctggccctgctgctggcggcggcgtggctggcg
cagcccctgcgcggcggctaccacggcgtgaacatgttcgccgtgcagagcgcccagccc
gacccctgctacgacgagcacgggctgccccgccgctgcatccccgacttcgtcaactcg
gccttcgggaaggaggtgaaggtgtccagcacctgcgggaagccgccgtcgcggtactgc
gtggtgacggagaagggcgaggagcaggtccgcacctgccacctctgcaacgcctccgac
cccaagcgcgcccacccgccctccttcctcaccgacctcaacaacccgcacaacctgacc
tgctggcagtccgacagctacgtccagtacccccacaacgtcaccctcaccctgtccctc
ggcaagaaattcgaggtgacctacgtcagcctgcagttctgctcgccgcgccccgagtcc
atggccatccacaagtccatggactacggcaagacctgggtgcctttccagttctactcc
acgcagtgccgcaagatgtacaacaagccgagccgcgccgccatcacgaagcagaacgag
caggaggcggtgtgcaccgactcgcacaccgacgtgcggcccctctccggcggcctcatc
gccttcagcaccctggacggccgccccaccgcccacgacttcgacaactcgcccgtgctg
caggactgggtgacggccaccgacatcagggtgaccttcagccgcctgcacaccttcggc
gacgagagcgaggacgactccgagctggcccgcgactcctacttctacgccgtgtccgac
ctgcaggtcggcgggcgctgcaagtgcaacgggcacgcgtcgcgctgcgtccgggaccgc
gacgacagcttggtgtgcgactgcaagcacaacacggccgggcccgagtgcgaccgctgc
aagcccttccactacgaccggccctggcagcgagcgacggcccgggaggccaacgagtgc
gtggcctgcaactgcaacctgcacgcgcggcgctgccgcttcaacatggagctgttcaag
ctgtcggggcgcaagagcggcggcgtgtgcctcaactgccggcacaacacggcgggcagg
cactgccactactgcaaggagggcttctaccgcgacctcagcaagcccatctcccaccgc
aaggcctgcaaagagtgtgactgtcaccccgtgggtgccgccggccagacctgcaaccag
accacgggccagtgtccctgcaaggacggcgtcaccggcatcacctgcaaccgctgcgcc
aagggctaccagcagagccgctcccccatcgccccctgcataaagatcccggctgctcca
cccaccacggctgccagcagcgccgaggagcccgcagattgtgactcgtactgcaaagcc
tccaaggggaagctgaagatcaacatgaagaagtactgtaagaaagactatgctgtccag
atccacatcctgaaagcagaaaagaacgcggactggtggaagttcacggtgaacatcatc
tccgtctacaagcaaggcagcaaccgcatccggcgtggagaccagaccctgtggatccac
tccaaggacatcgcctgcaagtgccccaaaatcaagcccatgaagaagtatttgctgctg
ggcaacaacgaggactctcccgaccagagcggcatcattgcggacaaaagcagcctggtg
atccagtggcgggacacgtgggcccggcggctgcggaagttccagcagcgcgagaagaag
ggcaagtgtaagaaagcctaa
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