Taeniopygia guttata (zebra finch): 100220818
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Entry
100220818 CDS
T01082
Symbol
VPS33A
Name
(RefSeq) vacuolar protein sorting-associated protein 33A
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04140
Autophagy - animal
tgu04148
Efferocytosis
tgu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100220818 (VPS33A)
04148 Efferocytosis
100220818 (VPS33A)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100220818 (VPS33A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tgu04131
]
100220818 (VPS33A)
Membrane trafficking [BR:
tgu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
100220818 (VPS33A)
Hops complex
100220818 (VPS33A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
100220818
NCBI-ProteinID:
XP_004176471
Ensembl:
ENSTGUG00000006195
UniProt:
H0Z751
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All DBs
Position
15:10656074..10664813
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AA seq
601 aa
AA seq
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MAAHLSSGRVNLTALREAGRRELREFLDKCAGSKAIVWDEYLTGPFGLIAQYSLLKEHEV
EKMFTLKPGRLPPADVKNIIFFVRPKLELMDIITDNVLREDRGRSPQRDFHILFVPRRSL
LCEQWLKEQGVLGSFIHREQYSLDLIPFDGDLLSMESESAFKECYLESDQTSLYHAAKGL
MTLQALYGTIPQIFGKGDCARHVANMMIRMKREFPGSQNSIFPVFDTLLLLDRNVDLLTP
LATQLTYEGLIDEIYGIQNTYVKLPPEKFAPKKQGEGGKDLPTEPKKLQLNSAEELYAEI
RDKNFNAVGSVLSKKAKIISAAFEERHHAKTVGEIKQFVSQLPHMQAARSSLANHTSIAE
LIKDITTSEDFFDNLTVEQEFMSGIDTDKVNNYIEDCIAQKHPLIKILRLVCLQSVCNSG
LKQKVLDHYKREILQTYGYEHLLTLNNLEKAGLLKPQTGGRNNYPTIRKTLRLWMDDVNE
QNPNDISYVYSGYAPLSVRLAQLLARPGWRSIEEVLKMLPGPHFEERQQLPTGLQKKRQH
GENRVTLVFFLGGVTYAEIAALRFLSQMEDGGTEYIIATTKLINGTTWIKSLMEKLEPAP
F
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcacctgagctcgggccgggtgaacctgacggcgctgcgcgaggcggggcgg
cgcgagctgcgcgagttcctggacaagtgcgcgggctccaaggccatcgtgtgggacgag
tacctgaccggccctttcgggctcatcgcgcagtactcgctgctcaaggagcatgaggtg
gagaagatgttcacgctcaagccgggccggctgcccccggctgacgtcaagaacatcatc
ttcttcgtcaggcccaagctggagctgatggacatcatcacggacaacgtgctcagggaa
gacagaggccgctctccgcagagggatttccacatcctgttcgtgccgcgccgcagcctc
ctctgcgagcagtggctgaaggagcagggcgtgctgggctccttcatccaccgcgagcag
tacagcctggacctgatccccttcgacggagacctgctctccatggagtccgagagcgcc
ttcaaggaatgttacctggagagtgaccagaccagtctgtaccatgcagcaaaggggctg
atgacactgcaggctctctacggaaccatcccgcagatttttgggaagggcgactgtgct
cggcacgtggccaacatgatgatcaggatgaagcgtgagttccctgggagccagaattcc
atatttcctgtctttgataccctcctgctgctggaccgcaacgtggacctgctgaccccg
ctggccacgcagctgacgtacgaggggctgattgatgagatctatggcatccagaacact
tatgtgaaactccctcctgagaagtttgccccgaagaagcagggggagggtgggaaagat
ctccccacagaacccaagaagctccagctgaactctgcagaagagctttatgccgaaatc
cgagacaagaacttcaatgctgtggggtcagtgctgagcaagaaagccaagatcatctca
gcagcctttgaggaaaggcaccacgccaagactgttggagagatcaagcagtttgtgtcc
cagctgcctcacatgcaggcggcgaggagctcactggcaaaccacacctccatcgcagag
ctcatcaaagacatcaccacatctgaagatttctttgataatttaacagtggaacaagag
ttcatgtctggaatagacacagacaaggttaacaattatattgaagactgcattgctcag
aaacatccattaatcaagatcttgcgtctcgtttgtttgcaatccgtgtgcaatagtggg
ctgaagcagaaggttctggaccattacaaaagagagattctccagacttatggctatgaa
catctattgaccttaaacaacttggaaaaggctgggctcctgaaaccccagacaggtggc
aggaataactacccaacaatcaggaaaacgctgcgcctgtggatggatgatgttaatgag
cagaaccccaatgacatctcgtacgtgtacagcggctacgccccgctgagcgtgcgcctg
gcccagctgctggcccggccgggctggcgcagcatcgaggaggttttgaagatgctgcca
gggccccatttcgaggagaggcagcagctccctactggcctgcagaaaaagcgtcagcac
ggtgagaacagagtgaccctggtgttcttcctgggcggggtcacgtacgcagaaatcgcc
gcgctgagattcctgtcccagatggaggatggaggcacagagtacatcattgccactaca
aaactgatcaacgggacaacctggatcaaatccttgatggagaaactggagcctgcccct
ttctag
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