Taeniopygia guttata (zebra finch): 100220854
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Entry
100220854 CDS
T01082
Symbol
BTRC
Name
(RefSeq) F-box/WD repeat-containing protein 1A isoform X1
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04114
Oocyte meiosis
tgu04120
Ubiquitin mediated proteolysis
tgu04218
Cellular senescence
tgu04310
Wnt signaling pathway
tgu04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100220854 (BTRC)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100220854 (BTRC)
04340 Hedgehog signaling pathway
100220854 (BTRC)
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
100220854 (BTRC)
04218 Cellular senescence
100220854 (BTRC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tgu04121
]
100220854 (BTRC)
03036 Chromosome and associated proteins [BR:
tgu03036
]
100220854 (BTRC)
Ubiquitin system [BR:
tgu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
100220854 (BTRC)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
100220854 (BTRC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-TrCP_D
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
F-box-like
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IP5PC_F
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_DCAF12
F-box
Beta-prop_IFT122_1st
NBCH_WD40
WD40_like
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_WDR11_2nd
Beta-prop_VPS8
Beta-prop_Nup120_160
F-box_5
DUF4508
Motif
Other DBs
NCBI-GeneID:
100220854
NCBI-ProteinID:
XP_002192900
Ensembl:
ENSTGUG00000010007
UniProt:
H1A2R3
LinkDB
All DBs
Position
6:complement(21736150..21850800)
Genome browser
AA seq
667 aa
AA seq
DB search
MRGAVAGRSRGARGSAGSRRRWLRPALSGGAAPARPRSAMDPAEAVLQEKALKFMPRIHM
PKDGFQLISSGYQAWLKQCSMPRSLWLGCSSLADSMPSLRCLYNPGTGALPAFQNSSERE
DCNNDEPPRKIIPEKNSLRQTYNSCARLCLNQETVCLGSTAMKTENCVAKTKLANGTSSM
IVPKQRKLSASYEKEKELCVKYFEQWSESDQVEFVEHLISQMCHYQHGHINSYLKPMLQR
DFITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSL
WRGLSERRGWGQYLFKNKPPDGTAPPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIHC
RSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIIT
GSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITL
RRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRL
VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALD
PRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPAAQAESTRSPSR
TYTYISR
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggtgcggtagcggggcgcagtaggggggcgcggggcagcgcaggttcccgtcgg
cgctggctgcggcctgcactgagcgggggggcggccccggcccggccccgcagcgccatg
gacccggccgaggccgtcctgcaggaaaaggcgctcaagttcatgccccgaatacacatg
ccaaaagatggatttcaacttatatcttctggataccaagcatggctaaagcagtgctct
atgcccagatctctgtggctgggctgctccagcctggcggacagcatgccctcgctgcga
tgcctgtataacccagggactggcgcactcccagctttccagaattcctctgagagagaa
gactgtaataatgatgagccccctaggaagatcattcctgagaagaattcacttagacag
acctacaacagctgtgccagactgtgcttaaaccaggaaacagtatgtctaggaagcact
gctatgaagactgaaaattgtgtggccaaaacaaaacttgccaatggcacttccagtatg
attgtgcccaagcaaaggaaactgtctgcgagctatgagaaggagaaggagctctgcgtc
aagtactttgaacaatggtccgagtctgaccaggtggagtttgtggagcacctcatctcc
cagatgtgtcactaccagcacggacacataaactcatacctcaaacccatgttacagcgg
gacttcatcactgcactgccagctcggggattggatcacattgctgagaacattctgtca
tacctggatgccaaatctctgtgtgctgctgagctggtgtgcaaggagtggtaccgggtg
acgtcggatgggatgctgtggaagaaactcattgagagaatggtcaggacagactccctg
tggaggggattgtcagagaggagaggatgggggcaatatctatttaaaaataaacctcct
gatggaactgcaccacccaactccttctacagagcactttaccccaaaattatacaagac
atagagacaatagagtcgaactggcggtgtggaaggcacagtttacagaggatccactgc
cgaagtgagacaagcaaaggggtttattgtttacagtatgatgaccagaagatagtaagc
ggcctacgagacaatactattaagatctgggataagaatacattggaatgcaagcgaatt
ctcactggacacacgggttctgtcctgtgcctccagtatgatgaacgtgtgatcattact
ggatcttcagactcaacagtcagagtgtgggacgtgaatgcaggtgagatgctgaatacc
ctgatccatcactgcgaggccgtgctgcacctccgcttcaacaacggcatgatggtgacg
tgctccaaggaccgctccatcgccgtgtgggacatggcctccccgacagacatcaccctg
aggagggtgctcgtagggcaccgagctgccgtcaacgtagtggactttgatgacaagtac
attgtgtcagcttcaggtgacagaactataaaggtatggaacactagtacctgcgaattt
gtgcgcaccttaaatggccacaaacgaggcattgcatgtctgcagtacagagacaggcta
gtagtgagcggctcttcagataataccatcaggctgtgggatatcgagtgtggggcatgt
ttacgagtactggaaggccatgaagagttggtgagatgcatacgctttgataacaagagg
atagtcagtggggcatatgatgggaaaataaaagtatgggatcttgtggctgctttggat
ccccgtgctccagcagggaccctctgcttgcgaacccttgtggagcattctggaagagtc
tttcgacttcagtttgatgagttccagatcgtcagcagctcacatgatgacaccatcctc
atctgggattttctgaatgacccagctgcccaggcagaatccactcgttccccgtccaga
acatacacctacatctccagataa
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