KEGG   Taeniopygia guttata (zebra finch): 100220854
Entry
100220854         CDS       T01082                                 
Symbol
BTRC
Name
(RefSeq) F-box/WD repeat-containing protein 1A isoform X1
  KO
K03362  F-box and WD-40 domain protein 1/11
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu04114  Oocyte meiosis
tgu04120  Ubiquitin mediated proteolysis
tgu04218  Cellular senescence
tgu04310  Wnt signaling pathway
tgu04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    100220854 (BTRC)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    100220854 (BTRC)
   04340 Hedgehog signaling pathway
    100220854 (BTRC)
 09140 Cellular Processes
  09143 Cell growth and death
   04114 Oocyte meiosis
    100220854 (BTRC)
   04218 Cellular senescence
    100220854 (BTRC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tgu04121]
    100220854 (BTRC)
   03036 Chromosome and associated proteins [BR:tgu03036]
    100220854 (BTRC)
Ubiquitin system [BR:tgu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     100220854 (BTRC)
Chromosome and associated proteins [BR:tgu03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     100220854 (BTRC)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_C Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I WDR55 Beta-TrCP_D Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd F-box-like Beta-prop_EIPR1 Beta-prop_RIG_2nd WDR90_beta-prop_4th ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_IP5PC_F Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_DCAF12 F-box Beta-prop_IFT122_1st NBCH_WD40 WD40_like Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_WDR11_2nd Beta-prop_VPS8 Beta-prop_Nup120_160 F-box_5 DUF4508
Other DBs
NCBI-GeneID: 100220854
NCBI-ProteinID: XP_002192900
Ensembl: ENSTGUG00000010007
UniProt: H1A2R3
LinkDB
Position
6:complement(21736150..21850800)
AA seq 667 aa
MRGAVAGRSRGARGSAGSRRRWLRPALSGGAAPARPRSAMDPAEAVLQEKALKFMPRIHM
PKDGFQLISSGYQAWLKQCSMPRSLWLGCSSLADSMPSLRCLYNPGTGALPAFQNSSERE
DCNNDEPPRKIIPEKNSLRQTYNSCARLCLNQETVCLGSTAMKTENCVAKTKLANGTSSM
IVPKQRKLSASYEKEKELCVKYFEQWSESDQVEFVEHLISQMCHYQHGHINSYLKPMLQR
DFITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSL
WRGLSERRGWGQYLFKNKPPDGTAPPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIHC
RSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIIT
GSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITL
RRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRL
VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALD
PRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPAAQAESTRSPSR
TYTYISR
NT seq 2004 nt   +upstreamnt  +downstreamnt
atgcgcggtgcggtagcggggcgcagtaggggggcgcggggcagcgcaggttcccgtcgg
cgctggctgcggcctgcactgagcgggggggcggccccggcccggccccgcagcgccatg
gacccggccgaggccgtcctgcaggaaaaggcgctcaagttcatgccccgaatacacatg
ccaaaagatggatttcaacttatatcttctggataccaagcatggctaaagcagtgctct
atgcccagatctctgtggctgggctgctccagcctggcggacagcatgccctcgctgcga
tgcctgtataacccagggactggcgcactcccagctttccagaattcctctgagagagaa
gactgtaataatgatgagccccctaggaagatcattcctgagaagaattcacttagacag
acctacaacagctgtgccagactgtgcttaaaccaggaaacagtatgtctaggaagcact
gctatgaagactgaaaattgtgtggccaaaacaaaacttgccaatggcacttccagtatg
attgtgcccaagcaaaggaaactgtctgcgagctatgagaaggagaaggagctctgcgtc
aagtactttgaacaatggtccgagtctgaccaggtggagtttgtggagcacctcatctcc
cagatgtgtcactaccagcacggacacataaactcatacctcaaacccatgttacagcgg
gacttcatcactgcactgccagctcggggattggatcacattgctgagaacattctgtca
tacctggatgccaaatctctgtgtgctgctgagctggtgtgcaaggagtggtaccgggtg
acgtcggatgggatgctgtggaagaaactcattgagagaatggtcaggacagactccctg
tggaggggattgtcagagaggagaggatgggggcaatatctatttaaaaataaacctcct
gatggaactgcaccacccaactccttctacagagcactttaccccaaaattatacaagac
atagagacaatagagtcgaactggcggtgtggaaggcacagtttacagaggatccactgc
cgaagtgagacaagcaaaggggtttattgtttacagtatgatgaccagaagatagtaagc
ggcctacgagacaatactattaagatctgggataagaatacattggaatgcaagcgaatt
ctcactggacacacgggttctgtcctgtgcctccagtatgatgaacgtgtgatcattact
ggatcttcagactcaacagtcagagtgtgggacgtgaatgcaggtgagatgctgaatacc
ctgatccatcactgcgaggccgtgctgcacctccgcttcaacaacggcatgatggtgacg
tgctccaaggaccgctccatcgccgtgtgggacatggcctccccgacagacatcaccctg
aggagggtgctcgtagggcaccgagctgccgtcaacgtagtggactttgatgacaagtac
attgtgtcagcttcaggtgacagaactataaaggtatggaacactagtacctgcgaattt
gtgcgcaccttaaatggccacaaacgaggcattgcatgtctgcagtacagagacaggcta
gtagtgagcggctcttcagataataccatcaggctgtgggatatcgagtgtggggcatgt
ttacgagtactggaaggccatgaagagttggtgagatgcatacgctttgataacaagagg
atagtcagtggggcatatgatgggaaaataaaagtatgggatcttgtggctgctttggat
ccccgtgctccagcagggaccctctgcttgcgaacccttgtggagcattctggaagagtc
tttcgacttcagtttgatgagttccagatcgtcagcagctcacatgatgacaccatcctc
atctgggattttctgaatgacccagctgcccaggcagaatccactcgttccccgtccaga
acatacacctacatctccagataa

DBGET integrated database retrieval system