Taeniopygia guttata (zebra finch): 100220864
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Entry
100220864 CDS
T01082
Symbol
TTC28
Name
(RefSeq) tetratricopeptide repeat protein 28 isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tgu03037
]
100220864 (TTC28)
Cilium and associated proteins [BR:
tgu03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
100220864 (TTC28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_8
TPR_2
TPR_10
TPR_MalT
TPR_14
Rapsyn_N
RPN7
TPR_6
TPR_16
TPR_11
TPR_NPHP3
TPR_9
TPR_19
TPR_17
ANAPC5
Motif
Other DBs
NCBI-GeneID:
100220864
NCBI-ProteinID:
XP_030141526
Ensembl:
ENSTGUG00000007824
LinkDB
All DBs
Position
15:8561191..8669705
Genome browser
AA seq
2473 aa
AA seq
DB search
MEQQAPPPPPGAVAVGRARREQDAEPARISFCGSKSFRRKSPDSPMLSKAEFVEKVRQSN
QACHEGDFHTAIVLYNEALGVDPQNCILYSNRSAAYMKIHQYDKALDDAIKARLLNPKWP
KAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPMRESLEPTYQQL
QKMKLDKSPFVVVSVIGQELLTAGHHGASVVVLEAALKIGTCSLKLRGSVFSALSSAYWS
LGNTEKSTGYMQQDLDVAKSLGDQTGECRAHGNLGSAFFSKGNYREALTNHRHQLVLAMK
LKDREAASSALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDELSEARELGNMGAVYIA
MGDFENAVQCHEQHLKIAKELGNKREEARAYSNLGSAYHYRRNFDKAMSYHNYVLELAQE
LAEKAIEMRAYAGLGHAARCMQDLERAKQYHEEQLHIAESLQDRAAEGRASSNLGIIHQM
KGDYDTALRLHKTHLSIAQELSDYAAQGRAYGNMGNAYNALGMYDQAVKYHRQELQISME
VNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDIQSEARALSNLGNFHCT
RGEFVQAAPYYEQYLRLSPELQDMEGEGKVCHNLGYAHYCLGNYEEAVKYYEQDLALAKD
LHDKLSQAKAYCNLGLAFKALMDFSKAEECQKYLLSLAQSLNNSQAKFRALGNLGDIFVC
KKDVHGAIKFYEQQLSLAHHVKDRRLEANAYAALGSAYRMVQKCDKALGYHTQELEVYQE
LGDMSGECRAHGHLAAVYMSLGKYTMAFKCYEEQLELGQKLKDPSIEAQVYGNMGITKMN
MNVMEEAIGYFEQQLAMLQQLSGNESVLDRGRAYGNLGDCYEALGDFEEAIKYYEQYLSV
AQSLNRMQDQAKAYRGLGSGHRAMGSLQQALVCFEKRLVVAHELGEAFNKAQAYGELGSL
HSQLGNYEQAISCLERQLNIAREMKDRALESDAACGLGGVYQQMGEYETALQYHQLDLQI
AEETNNPAGQGRAYGNLGLTYESLGTYERAVVYQEQHLSIAAQMNDLVAKTVSYSSLGRT
HHALQNYSQAVMYLQEGLRLAEQLGRREDEAKIRHGLGLSLWASGNLEESQHQLYRASAL
FETIRHEVQLSTDYKLSLFDLQTSSYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVE
RQTGQQDSDPYSPVTLDQVLETVNGQRGLVLYYSLAAGYLYSWLLAPGAGILKFHEYYLG
DSLTENAGDFHEANSVALQTLTNSALEQHISSVREALGVDSYYTRACASSETESEAGDIM
DQQFEEMNNKLNSMTDPTGFLRMVSRNNLLNRSCQSMTSLFSSTMSPVKDGTSSLPRKQT
SFTKPPLRALYDLLIGPMEGGLMHSSGPVGRHRQLVLVLEGELYLIPFALLKGSSSNEYL
YERFSLIAVPSIQSLNPSSKSHVRKNTPAYSSSTSMAAVIGNPKLPSAVMDRWLWGPMPS
AEEEAYMVSELLGCQPLVGSSSTKERVMSALTQAECVHFATHVSWKLAALVLTPNTDSNP
ASSKSSFGNPYTIPESLRMQDDASDVESISDCPPLQEFLLTAADVLDLRLPVKLVVLGSY
QESNSKVTSDGVIGLTRAFLAAGAQCVLVSLWPIPVAASKMFVHAFYSSLLNGMKASAAL
GEAMKTVQSSKQFSHPANWAGFMLIGSDMKLNSPSSLVGQALTEILQHPERARDALRVLL
HLVEKSLQRIQNGQHNSMYTSQQSVENKVGGIPGWQALLTAVGFRLDPPASGLPAAVFFP
TSDPGDRLQQCSTTIQSLLGLPNPALQALCKLITASETGEQLISRAVKNVVAMLHQVLVQ
LQAGEKEQDFPSAPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVILKTGKQATRRT
MHFALQSLLALFDSTELPKRLSLDSSSSLESLASAQSVSNPVPQYQNPPFSPTCPDSIAS
DAISVYSLSSIASSMSFVSKPENMLDGAGHRGRQDYERPKNIYPHRSAAQSQLSPQATTA
SKDEEEYEGFSIISNEPLASYQDNIKPRFSPDHKQPKTSQNGGIKASINSKGSISTPNSP
VKMTLIPSPNSPFQKVGKLASSDTGESDQSSTETDSTVKSQEDSNPKLDPQELAQKILEE
TQSHLIAVERLQRSSSQISKSNSSEDGAPSPGGVSAFRSSETSAFSRPLSSSQRNQSSSP
LAIKPKPPTRSSSLQKVSSGYNSPTTSEMSNREGTGQHSGQPSPGCDSHGSLTEQPPFKL
KYPSSPYSAHISKSPRNISPSSGHQSPGGSTPSPALSYSSAGSARSSPADAPDIDKLKLA
AIDEKVQAIHNLKMFWQSTPHHSTGPIKILRGAPGTMTSKKDVLSLLNLSPRHSKEESAE
KVELKDLSIGQHLSASSQKIPPNGHRCPESTNAMTSAHSSPSNTLGAVRPLRLPAGNGYK
FLSPGRFFPSSKC
NT seq
7422 nt
NT seq
+upstream
nt +downstream
nt
atggagcaacaggcgccgccgcccccgccgggggccgtggcggtgggccgggctcggcgg
gagcaggacgcggagcctgcccggatttccttctgtggatccaaatccttcagaagaaaa
agtcctgacagtcccatgttgagcaaagctgaatttgtggagaaggttcggcagagcaac
caggcttgccatgagggcgacttccacacggccatcgtgctctacaacgaggccctgggg
gtggacccccagaactgcatcctctacagcaaccgttctgcagcctacatgaaaatccac
cagtatgacaaggccttggatgatgccatcaaggcacgactcctgaatcccaaatggcca
aaggcatacttccgtcagggcgtggccctgcagtacctgggccgccatgcggatgcgctg
gccgcctttgcctcggggctggcgcaggatcccaagagccttcagcttctggtcggcatg
gtggaggccgccatgaagtctcccatgcgagagtccctggagcccacctaccaacaactg
cagaagatgaagctggacaagagcccctttgttgtggtgtctgtgattggtcaggagctc
ctgactgcaggccaccacggggcctctgtggtggtgctggaggctgccctgaagattggc
acttgcagcctgaagctgcggggatcggtgttctctgcgctgagcagtgcgtactggtcc
ctcgggaacacggagaaaagcactggatacatgcagcaggacttggacgtggccaagagt
ttaggtgaccagacaggagaatgccgagctcatggaaatctgggctctgcattcttctcc
aaaggaaattaccgggaagcacttactaaccacagacatcagctggtgcttgccatgaag
ctcaaggacagagaggcagcatcctcggctctgagcagtctgggccacgtgtacacggcc
atcggggactacccaaacgcactggctagccacaagcagtgtgtcctcctcgccaagcag
tccaaagatgagctctccgaggcacgggagctgggcaacatgggagcggtgtacattgcc
atgggggattttgaaaacgcagtgcagtgccacgagcagcacctgaagatcgccaaggag
ctggggaacaagcgggaggaagctcgagcctacagcaacctgggcagtgcttaccactac
cgcaggaactttgacaaagccatgtcctaccacaactacgtgctggagctggcccaggag
ctggctgagaaggccattgagatgcgagcttacgctggcctgggccatgcagctagatgt
atgcaagatctggagagggctaagcagtaccatgaagaacagttgcacattgctgagagc
ctgcaggaccgagctgctgaaggcagagcctcctccaatctaggaatcattcaccagatg
aaaggcgactatgacaccgcgctgcggctgcacaagacacacctgtccatagcgcaggag
ctgagcgattacgcggcccagggccgggcctacggcaacatgggcaacgcctacaacgcc
ctgggcatgtatgaccaggccgtcaagtaccatcggcaggagctgcagatctccatggag
gtcaacgaccgcgcttctcaggcatccacacacgggaacttggcggttgcttatcaggcg
ctgggtgcccatgaccgtgctctgcagcactaccaaaatcatctcaacattgcccgggag
ctgcgcgacatccagagcgaagcgcgagccctcagcaatttgggcaacttccactgcaca
cgaggagagttcgtgcaggcggccccgtactatgagcagtacctgcgcttgtcccctgag
ctgcaggacatggaaggcgaggggaaagtttgccacaaccttggctatgcccattattgc
ctcgggaactatgaggaagctgttaagtactacgagcaggatcttgcgttagcaaaggat
cttcatgacaagctgagccaggccaaagcctattgcaacctgggcctggccttcaaagcc
ttgatggacttcagcaaagcagaggagtgtcaaaaatacctgttgtccctggcacagtct
ctgaacaattcccaggccaaattccgagctctggggaacttgggggatatttttgtctgt
aaaaaagatgtacatggtgcaataaaattttatgagcagcagttgagcttagcccatcac
gttaaagacaggagactggaagccaatgcctatgcagccctgggctctgcatacaggatg
gtacagaagtgtgacaaggctttaggttaccatacacaggagctggaggtataccaagag
ctgggggatatgtcgggtgaatgcagagcacatggtcaccttgctgcagtgtatatgtca
cttgggaagtacaccatggccttcaagtgctacgaagaacagctggagctggggcagaag
ttgaaggaccccagcatcgaagcccaggtctacggtaacatgggcattaccaagatgaac
atgaatgtcatggaggaagcgattggctactttgagcagcagctggccatgctgcagcag
ctcagtgggaacgaatccgtattagatcggggccgagcgtatgggaacctgggagattgt
tatgaggctctgggagattttgaggaagctataaagtattatgaacagtacctgtctgtg
gctcaaagcttgaaccgtatgcaagatcaggcaaaggcctaccgaggcttgggcagtggg
cacagggctatgggaagtttacagcaggctctggtgtgctttgagaagaggcttgtagtg
gcacatgagctgggggaggcatttaacaaagcccaggcttacggggagctgggaagcctg
cacagccagctgggcaactacgagcaagccatttcctgcctggagcggcagctgaacatc
gcccgggagatgaaggaccgagcgctggagagcgacgctgcctgcggcctggggggggtg
taccagcagatgggcgagtacgagaccgccctgcagtaccaccagctggacctgcagatc
gccgaggagaccaacaaccccgccggccagggccgcgcctacggcaacctgggccttacc
tacgagtccctgggcacctacgagagggcagtggtttatcaggagcagcacctcagcatt
gcagcgcaaatgaacgacctcgtagccaaaaccgtgtcttacagcagcctggggaggact
caccacgctttacagaattactctcaggctgtgatgtacctgcaggaaggactgaggctg
gcagagcagctgggtcgcagagaagatgaagcaaaaatccgtcatggcctcggcctctcc
ctctgggcgagtggcaacctggaggagtcccagcaccagctgtaccgcgcctccgcgctg
tttgaaaccatccgccacgaggtgcagctgagcacggattacaaactgtcactcttcgac
ctgcagacatcctcctaccaggccctgcagcgagttcttgtcagtctgggtcaccatgat
gaggcactggcagtagcagagaggggacgaacgagggcttttgctgacctgctcgtggaa
cgtcagactgggcagcaggactcggatccctactctcccgtgaccctcgaccaggtcctg
gagactgtgaatggccagaggggacttgttctctactactcactggctgcaggttatctg
tacagctggctgctggctcctggggcaggaattctgaaattccatgagtattatctgggt
gacagcctgacagaaaatgctggggacttccatgaagccaacagcgtggccctgcagaca
ctgacaaactcagcactggagcagcacatctccagtgtgagggaggctctgggagtggat
tcctactacaccagagcctgtgctagcagcgagacagagagtgaagctggggatatcatg
gaccagcagtttgaggagatgaataacaagctgaactcaatgactgatccaactggcttc
ctgaggatggtcagcaggaacaacctattgaacaggagctgtcagagtatgaccagcctg
ttcagcagtaccatgtctcctgttaaggatggaacatcatcacttccaaggaagcagact
tctttcaccaagcccccactccgtgctctctacgacttactgataggacccatggaagga
ggtttgatgcattccagtgggcctgttggccgccaccgtcagctggtcctggttctggag
ggagaactgtacctcattccttttgctctcctgaagggcagttcctccaacgagtacctc
tacgagcgcttcagcctcattgcagtgccatccatccagtcactgaatcccagctccaag
tcccatgtgaggaagaatactcctgcttactccagttctacctcaatggcagctgtgata
ggaaatcccaagctcccttcagcagttatggacaggtggctgtggggacctatgccttct
gcagaggaggaagcatatatggtatctgaattacttggctgccaacccttagttgggagc
tcatcaacaaaagagagagtcatgagtgccctcactcaggcagaatgtgtccattttgca
acccacgtctcctggaaactggctgctttggtcctgacaccaaacactgacagcaaccca
gccagcagcaagagttcctttgggaacccctacacaatcccagaatctcttaggatgcag
gatgatgccagtgatgtggagagcatctcagactgccctcctctccaggagttcctgctt
acagcagctgatgtgctggatctgcgtcttcctgtcaagctggtggttcttggctcttac
caagagtccaacagcaaagtcacttctgatggagtcattggcttgacaagagcattcctg
gctgctggggctcaatgtgtccttgtgtcactctggcccattcctgtggctgcttccaaa
atgtttgtgcacgccttctattcctctctcttgaacgggatgaaagccagcgcagccctg
ggagaagcaatgaaaaccgtgcagagcagcaagcagttctcccatccagccaactgggca
ggcttcatgcttattgggagtgatatgaagctgaacagcccttcctcactggtaggacaa
gccctgactgagatcctgcagcaccctgaaagggcccgggatgctctgcgtgttctcctt
catctggtggagaaatcattgcagcgaatccagaatgggcagcacaactccatgtacacc
tcccagcagagcgtggagaataaagttggtggcattccaggctggcaggcactcctcaca
gcagtgggatttcggttggacccaccagccagtggcctcccagcagcagtgttcttccca
acctcggaccctggggaccggttgcagcagtgcagcaccaccatccagtccctcctaggt
ttgcctaaccctgcacttcaggcactttgtaaacttatcacagcttcagaaacaggagag
cagcttatcagcagggctgttaaaaatgtggtggcaatgctgcatcaagtcctggttcaa
cttcaagcaggcgagaaggagcaagatttcccctctgcaccaatccaggtctccatcagt
gtccagctctggaggctgcctggctgtcatgaatttctggcagctctaggttttgacctt
tgtgaagttggccaagaggaggtcattctgaaaactgggaaacaagctaccaggaggacc
atgcactttgctctacaatccttgctggcactttttgattctacagagctgcccaagcgc
cttagcctggacagttcctcatcactggagtcactggcttctgctcagtctgtttccaac
cctgtaccccagtatcaaaaccctccattctctcctacctgtccagacagcattgcctca
gatgccatttctgtgtacagcctgagctccattgcttcttccatgagctttgtttccaag
ccagagaacatgctggatggggcaggacacagagggcggcaggattatgagaggcccaag
aatatctatccacacaggtctgcagctcagagccagctgtcaccacaagccactacagcc
agcaaagatgaggaagagtatgaaggtttctctataatcagcaatgagcctttagccagt
taccaagacaacataaaaccaagattttcccctgatcacaaacagcccaaaactagtcag
aacggaggcattaaagcatccatcaactccaaagggagcataagtactccaaattctcct
gttaaaatgactctcatcccaagcccaaattcacctttccaaaaagttggaaaacttgca
agttctgatactggggaatctgaccagtctagcactgagactgacagcaccgtcaaatcc
caggaggacagtaatccaaagcttgatccacaagagttggcccaaaaaattctggaggaa
actcagagtcacctcattgctgttgaacgtcttcagagaagcagcagccagatcagcaag
agcaacagctcggaggatggggctcccagcccgggtggcgtgtccgccttccgctcctcg
gagaccagcgccttcagccgcccgctcagctccagccagaggaaccagtcctcttcacct
cttgcaatcaaaccaaagcctccaacgaggagttcatcccttcagaaggtgagctctggc
tataacagccccacaacgtcggagatgtcaaacagagaaggcacaggccagcacagtggg
cagccatctccaggttgtgattcacatgggtccctaactgagcagcctccctttaaactc
aagtaccccagctctccttacagtgctcacatttctaaatcacccagaaatatatctccg
agctcagggcatcagtcccctggtggcagcactccatctcctgctctttcttattcctca
gctggttctgctcgctcaagcccagctgatgccccagacatagacaaattaaaattggct
gccattgatgaaaaagtgcaagcaattcacaacttaaagatgttctggcaaagcactccc
caccactctactggtccaataaagattctccgaggagctcctggaacgatgacttctaag
aaagatgtcctcagcttgctcaatttatcaccacggcacagcaaagaagaaagtgcagag
aaggtggaactgaaggatctgtccattgggcaacacctttctgcttcatcacagaagatc
cctccaaatggacatagatgccctgaaagcacaaatgccatgacatcagctcattcctca
cctagcaacaccctgggagctgtgcgtcccctgaggctgccagctgggaacgggtataaa
tttttgtcaccaggaagatttttcccttcctccaaatgctga
DBGET
integrated database retrieval system
