Taeniopygia guttata (zebra finch): 100220903
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Entry
100220903 CDS
T01082
Symbol
SLC44A5
Name
(RefSeq) choline transporter-like protein 5 isoform X3
KO
K15377
solute carrier family 44 (choline transporter-like protein), member 2/4/5
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tgu02000
]
100220903 (SLC44A5)
04147 Exosome [BR:
tgu04147
]
100220903 (SLC44A5)
Transporters [BR:
tgu02000
]
Solute carrier family (SLC)
SLC44: Choline-like transporter
100220903 (SLC44A5)
Exosome [BR:
tgu04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
100220903 (SLC44A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Choline_transpo
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
100220903
NCBI-ProteinID:
XP_002189393
Ensembl:
ENSTGUG00000010420
LinkDB
All DBs
Position
8:92556..160500
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AA seq
715 aa
AA seq
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MARKGEASAYLYGEPRKFDPKFRGPIHNRRCTDIICCVIFIVVILGYIALGVVAWVHGDP
RKVIYPTDSYGQFCGQRDTLNENKTILFYFNILKCASPVVLINLQCPTTQLCVSKCPDRF
ATYIDVQASYRYRPDQWNYFRQFCKPGFNNPRKSVAQVLRDEDCPSMIIPSRPFLKRCFP
DFSTKNGVLTVANQTTFKDGRGKTRNVTDLREAANGINNVLDARSVGMKIFEDYAISWYW
ILIGLFIAMLLSLLFLVLLRFTAGVLFWIFIFGVIGIIGYGIWHCYWEYDHLKGIPGSDL
TVYDIGFQTDFKVYLQLRQTWLAFMIILCGVEVIIILMLIFLRNRIRIAIALLKEGSRAI
GYIMSTLFYPIVTFLLIAICISYWAVTAVFLATSGEPVYKVMANQTLCKYANLTCDPETF
NTTNVTKLCPGAQCTFAFYGGESLYHKYIFIFQLANAFVFLWLVNFAIALGQCTLAGAFA
SYYWAYRKPADIPLWPLFSSFGRAIRYHTGSLAFGALILAIVQLIRVILEYLDHKLKGTQ
NSFTRFLLCCLKCCFWCLEKFLKFINRNAYIMIAIYGKNFCTSAKEAFFLLMRNVVRVAV
LDKVTDFLLFLGKILVAGGVGVLAFFFFTQRIPVFAQEVPMLNYYWVPLLTVIIGSYLVA
HGFFSVYAMCVDTLFLCFCEDLERNDGSTAKPYFMSASLHRILGKKKLSPKKAAG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggaagggcgaagcctccgcatatctctacggtgaaccaaggaagtttgaccca
aagttcagaggacctattcataacaggcgctgcacagacattatttgctgtgttatcttc
atagttgtcattctgggttacattgcattaggagttgtggcttgggtgcatggggacccc
aggaaagtgatttatccaactgacagctacgggcagttctgtggtcagagagataccctc
aatgagaacaagaccattttgttttacttcaacattctgaaatgtgccagccccgtagtg
ttaataaacctacagtgccctacaacacagctttgtgtctcaaagtgcccagacaggttt
gcaacctacattgatgttcaggcttcctacagatatagaccagatcagtggaattacttc
agacaattctgcaaacctggttttaacaatcctcgcaagtctgttgctcaagtcctacgt
gatgaagattgtccttcgatgatcattccaagcaggccttttctgaagagatgcttccca
gacttctccacgaagaatggtgtgttgaccgtggcaaatcagactacattcaaagatgga
agagggaaaacaagaaatgtaactgatctcagggaagctgcaaatggcatcaataatgtc
ctggatgcaagatcagttggaatgaaaatttttgaagactatgccatttcttggtattgg
attttaattgggctgttcattgcaatgttgctgagtctgctgttccttgtgttattgagg
ttcacagctggtgttctcttctggattttcatctttggtgtgattggaattataggttat
ggcatctggcattgttactgggagtatgatcatcttaaaggaatacctggatctgacctc
actgtatatgatattggattccagacagacttcaaagtgtacctgcaactgaggcaaaca
tggttagcatttatgataatactttgtggtgttgaagtcataatcatactgatgctgatc
ttcctaagaaatcgtattcggattgctattgcactgttgaaggaaggtagtagggcaatt
ggctatataatgtctacactgttctacccaattgtcaccttcttactcattgcaatttgt
atttcctactgggctgtgacagctgtttttctggccacatcaggagaacctgtgtataaa
gtaatggctaatcaaacactgtgcaagtatgcaaacctgacttgtgacccagagactttt
aacacaaccaatgtgactaaattgtgcccaggtgctcagtgtacttttgctttttatgga
ggagaaagcctgtaccataagtacatcttcatcttccagttagccaatgcctttgtcttt
ctctggctggtaaactttgcaattgcactgggtcagtgtacccttgctggtgcctttgcc
tcttattactgggcctatcgaaaaccagctgatattccactgtggccgctcttctcttca
tttggacgagcaatacgatatcatacaggttcactggcatttggagccttaattcttgca
attgtccagcttattagagtaatactggaatacctggatcacaaactgaaaggtactcag
aactccttcactagattcctactctgctgcctcaagtgctgtttctggtgtttggaaaaa
tttttaaaatttataaacagaaatgcctacatcatgattgccatatatggtaaaaacttc
tgcacctcggcaaaggaagcattctttttgctcatgcggaatgtggtgagggttgcagtt
ctggacaaagttacagacttccttctatttttggggaaaatccttgtcgctggtggtgta
ggtgttcttgcattctttttcttcacacagagaataccagtctttgcacaggaagtgcca
atgctaaattactactgggtaccattgttgacggtcatcattggctcctacctagttgca
cacgggttcttcagcgtctatgcaatgtgtgtcgacacgcttttcctctgcttttgtgaa
gacctggaaagaaatgatggatctacagcaaaaccctacttcatgtcagctagcctccac
cgaattctagggaagaagaaactaagccctaagaaggcagcaggataa
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