Taeniopygia guttata (zebra finch): 100220912 Help Entry 100220912         CDS       T01082                                  Symbol CCDC88A Name (RefSeq) girdin isoform X8   KO K25392   girdin Organism tgu  Taeniopygia guttata (zebra finch) Brite KEGG Orthology (KO) [BR:tgu00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:tgu03037]     100220912 (CCDC88A) Cilium and associated proteins [BR:tgu03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    100220912 (CCDC88A) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HOOK_N HOOK APG6_N KASH_CCD GAS Motif Other DBs NCBI-GeneID:  100220912 NCBI-ProteinID:  XP_012427787 Ensembl:  ENSTGUG00000007001 UniProt:  A0A674GFT2 LinkDB All DBs Position 3:complement(84155568..84221070) Genome browser AA seq 1885 aa AA seqDB search MENEIFTPLLEQFMSSPLVTWVKTFGPLAGGNGTNLEEYVALVDGVYLNEVMMQINPKST NQRINKKVNNDASLRIQNLSILVKQIKTYYQETLQQLIMMSLPNVLIIGKNPFSEPGTEE VKKLLLLLLGCAVQCQKKEEFIERIQSLDFDTRAAVAAHIQEVTHNQENVFDLQWMDVIV LTQEYVEPLLKNMALHLKRLIDERDEHSETIIELSEERDCLRFLPHASAAQSPCGSPGMK RTESRQHLSVELADAKAKIRRLRQELEEKTEQLLDCKQELEQMEAELKRLQQENMNLLSD ARSARVYRDELDALREKAIRVDKLESEVSRYKERLHDIEFYKARVEELKEDNQVLLETKT MLEDQLEGTRARSDKLHELEKENLQLKAKLHDMEMERDMDRKKIEELMEENMTLEMAQKQ SMDESLHLGWELEQINRTTELSEVPQKSLGHEVNELTSSRLLKLEMENQSLLKTVEELQS AVGSVEGSSSRILKMEKENQRLSKKLEELENEISQEKQSLQNSQNQSKDLMKEKAQLEKT LEALRENSERQIKLLEQENEHLNQTVASLRQRSEISAEARMKEIEKENKILHESIKETSS KLNKLEFEKKQVRKELEHYKEKGERAEELENELHRTEKENELLQKKITNLKITCEKIEAL EQENSDLETENRKLKKTLDSLKNLTFQLESLEKENSQLDEENLELRRTIESLKCTSIKVA QLQLENKELESEKEQLKKSLELMKASFKKTERLEVSYQGLDTENQRLQKALENSNKKIQQ LESELQDLETENQTLQKNLEELKISSKRLEQLEKENKLLEQETSQLEKDKKQLEKENKRL RQQAEIKDSTLEENNVKISNLERENKSLFKEIVVYKESCLRVKELEKENKELVKRATIDK KTLVTLREDLVNEKLKTQQMNNDLEKLAHELEKIGLNKERLLHDEQSSDDSRYKLLESKL ESTLKKSLEIKEEKIAALEARLEESTNLNQQLRQELKTVKKNYEALKQRQEEERMVQNSP PRSGEGNQSVNKWEKENQETTRELLKVKDRLIEVERNNATLQAEKQALKTQLKQLETQNN NLQAQILALQRQTVSLQEQNTTLQTQNAKLQVENSTLNSQSTSLMNQNAQLLIQQSSLEN ENEAVLKEREDLKGLYEALLKDHERLELLHERQATEYESLIAKHGSLKSAHKNLEVEHKD LEDRYNQLLKQKVQLEELEKVLKTEQDKMLQQSEKHETVAAEYKRLRDENERLTHTYNQL LRENEVLQTDHKNLKTLLNSSKLEQTRLEAEFSKLKEQYQQLDITSTKLNNQCELLSQLK GNLEEENRHLLDQIQTLMLQNRTLLEQNMESKDLFHVEQRQYIDKLNELRRQKEKLEEKI MDQYKFYEPSPPRRRGNWITLKMRKLIKSKKDGNRERLKSATLTPTRSESSEGFLQLPHQ DSQDSSSVGSNSLEDGQTLGTKKSSMGALKRLPFLRNRPKEKDKMKAFYRRSMSMNDLVQ SMVLAGGQWTGSSEHLEGPDDISTGKRRKELGAMAFSTTAINFATVNSSTGFRSKQLLNN KDTTSFEDVSPQGISDDSSTGSRVHASRPASLDSGRTSTSNSNNNASLHEVKVGAVNSQS RPQSHSSGEFSLLHEHEAWSSSSSSPIQYLKGHTRSSPVLQHRTPEMPESRGKQTKTGSP GSEVVTLQQFLEESNKSNSSEMKSASEENLLDEVMRSLSESAELAGREKLRKEPAAACGI VRSLSVRNTVDFSDGRSLKPEQLVRPSLRKTEDLYFSSSPIKFTPGTQGKARSVKEKIQA TVTQRQSRDCNPYATLPRASSVISTAEGTTRRTSIHDFLSKDSRPPVSVDAAPAPADRSA PPTSNVEAIPESRNSKSRSREQQSS NT seq 5658 nt NT seq  +upstreamnt  +downstreamnt atggagaacgagatcttcacaccccttctggagcagttcatgtcgagccctcttgtcacc tgggtgaagacatttggaccgctggctggaggaaatgggaccaacttggaggaatatgtg gcgctggtggatggagtgtatctgaacgaagtcatgatgcaaatcaatccaaagtctact aatcagaggataaacaaaaaagtaaacaatgatgcatcattaaggattcaaaatttgtct atcttggtgaaacaaataaaaacttactatcaggagactttgcagcagttgatcatgatg tctttgccaaatgtgctaataattggcaaaaatcctttttctgagccaggtactgaagaa gtaaaaaagctcctcctgcttttgcttggttgtgcagttcagtgtcagaaaaaagaagaa tttattgaaagaatccaaagtctggattttgataccagagcagctgttgcagcccatatt caggaggtaactcataatcaggaaaatgtgtttgacctgcagtggatggatgtcattgtg ctgacacaagaatatgttgagcctctcctgaaaaatatggcactgcatttaaaaagactt atagatgaaagagatgagcactcagagaccatcatcgagctgtcggaggagcgggactgt ctccgtttcctgccgcacgcctcggctgcgcagtccccgtgcggttctcccggcatgaag cgcaccgagagccggcagcacctcagcgtggagctcgccgacgccaaggccaagatcagg aggctgaggcaggagcttgaggaaaagactgagcagctgcttgactgtaaacaagaacta gaacagatggaagctgaactgaagagacttcagcaagagaacatgaacctgctgtcggat gcccgctctgccagggtgtaccgggatgagctggacgcgctgcgggagaaggcaatccgc gtggacaagctggagagcgaagtcagccgctacaaagagaggctccatgacattgagttc tacaaagccagggtggaggagttaaaggaagacaatcaagtgttgctagaaaccaagaca atgttggaagatcaattagaggggacccgagcgcgttcggataaactgcacgagttagaa aaagagaatttacaactaaaagctaaattgcatgatatggagatggagcgtgatatggac agaaagaagattgaggagctcatggaggaaaatatgaccctagaaatggctcagaaacaa agtatggatgagtctttgcatcttggctgggagctggagcagataaacaggactactgaa ctttctgaagtgccacaaaaatcactgggccatgaggtgaatgagctgacatccagcagg ttactcaagctggaaatggaaaaccaaagtttactgaagaccgtggaagagctgcaaagt gcagtgggctctgtggaaggcagcagttcaaggattctgaaaatggaaaaagaaaaccaa agacttagcaagaagcttgaagaactggagaatgaaattagccaagagaaacaaagtctt cagaacagtcaaaatcagagtaaagatttgatgaaagaaaaagcacagcttgaaaagaca cttgaagcacttcgagagaactccgagcggcaaattaaactcttagaacaagaaaatgag cacttgaatcaaactgtggcttctctaaggcagcgctcagaaatcagtgctgaggcaaga atgaaagaaattgagaaggaaaataaaatcctccatgagtctatcaaagagaccagcagt aagttaaataagcttgaatttgaaaaaaaacaagtcaggaaagagctggaacactacaaa gagaaaggggagagagcagaagaattagagaacgaactgcatcgtacggagaaggaaaat gagttattacagaagaaaatcaccaacctaaaaatcacttgtgagaagatcgaggcctta gaacaagagaactctgacctggagacggagaacagaaagctgaaaaaaaccttggatagc ctgaaaaacctcacttttcaattagagtcgttagaaaaagagaattcccagcttgatgaa gaaaatttagagctacggaggacaattgaatccttaaagtgtacaagcattaaagtggca cagttacagttagaaaataaggagctggagagtgaaaaggagcagctcaaaaaaagcctt gaactgatgaaagcctcttttaagaagactgaacgcttggaagtgagttaccaaggcctg gacacagaaaaccaaaggctacaaaaagccctggaaaacagcaataagaagattcagcaa ttagagagcgaattacaagatttagagactgaaaatcagaccctgcaaaagaacttggaa gagttaaaaatctctagtaaacgcctggagcagttggaaaaggagaataagttgttagaa caagagacttcacaactggaaaaggataagaaacagctggaaaaggaaaataaaaggctt cgacagcaagcagaaattaaagatagtaccttagaagaaaataatgtcaaaatcagtaat ctggaaagggaaaataaatctctgtttaaagaaatagttgtatacaaagagtcgtgtctg cgcgtgaaagaactggaaaaggaaaacaaggaactggtgaaaagagctaccattgataag aaaaccctggtcactttgagagaggacttggtgaatgagaaattgaagactcaacagatg aacaatgatctagaaaaactagcccacgagcttgagaaaattggcttgaacaaggagcgt ctcctgcacgatgagcagagcagtgatgacagtaggtacaagcttttggagtccaaatta gaatccacgctcaagaagtctctggaaataaaagaagaaaaaattgctgctttggaggct cgtttggaagaatcaacaaatctaaaccagcagctacgtcaggaactgaaaacagtgaag aagaactatgaagctctcaagcaaagacaagaagaggaaagaatggttcagaattctcct ccaagaagtggagaaggaaatcagtctgtcaataagtgggagaaagaaaatcaggagact actagagaattactgaaagttaaagatagattaatcgaggtggagaggaataatgcaacg ctgcaggcagagaagcaggcgctgaaaacacagctcaagcagcttgagacacagaacaac aacctgcaggcccagatcctggccctgcagagacagactgtgtccctgcaagagcaaaac actactctgcaaactcagaatgccaaactgcaggttgagaattccacgctgaactcacag agcacgtccctgatgaaccagaacgcacagctgctgatccagcagtcgtccctggagaac gagaacgaggccgtgctgaaagagcgtgaggacctgaaggggctctacgaggccctgctc aaggaccacgagcgcctggagctgctgcacgagcgccaggccaccgagtacgagtccctc attgccaagcacggcagcctcaagtctgctcacaagaacctggaggtggagcacaaggac ttggaggataggtacaatcagttgctgaaacagaaagtgcagctggaagaactggagaag gttctcaagacagagcaggacaaaatgcttcagcaaagtgagaagcatgaaactgtggca gcagaatataaaagacttcgggatgaaaatgaaaggctcactcacacatacaatcagctc ctgagggagaatgaagtgctacaaactgaccacaagaatctgaaaacattattgaacagt tccaaactggaacaaacacggttggaagctgagttttctaaactcaaagaacagtaccag caactggatattacatcaacaaagctaaataatcagtgtgagctgctcagccaacttaaa ggaaacctggaggaggaaaacagacacctgctggatcaaatccagaccttaatgcttcag aacagaactttactggagcagaatatggaaagcaaggatctcttccatgtagagcaaagg cagtacattgacaaactgaatgaattgaggcggcagaaggagaaactggaagagaagata atggatcagtataagttttatgagccatctccaccaagaagaaggggcaactggatcacc ctgaagatgaggaagctgatcaagtccaagaaggacgggaaccgcgagcgcctcaagtcg gcaacgctgacacccacgcgctccgagtccagcgagggattcctgcagctgccccaccag gacagccaggacagctcctctgtgggctccaactccctggaggacgggcagaccctgggc accaaaaagagtagtatgggtgcactgaaaagactgccctttttgaggaacagaccgaag gaaaaagacaaaatgaaggccttctaccgtcgctccatgtccatgaatgacctggtgcag tccatggtcctggcaggaggacaatggacaggtagttctgagcatctggagggtcctgat gatatatccacgggtaaaaggaggaaggaattgggagctatggccttctctactacagct atcaactttgccactgtcaactcctccacaggcttcagatccaagcagttgctaaataat aaagataccacatcctttgaagatgtaagtccacaaggtattagtgatgattctagtaca ggatcaagagttcatgcttccagaccagccagccttgatagtggcaggacatccactagc aatagcaataacaatgcttcactccatgaagtcaaagtaggtgcagtgaacagccagagc aggccccagagccacagcagcggggagttcagcctgctccacgagcacgaggcctggtcc agcagcagcagcagccccatccagtacctgaaggggcacaccaggtccagccctgtgctc cagcacaggacgcccgagatgccggagagtcgtggcaaacagaccaaaacaggctcccct ggcagtgaagttgtcaccctgcagcagttcctggaagaaagcaacaagagtaactccagt gagatgaaatctgcgagtgaggagaaccttttagatgaagtgatgagaagtttgtctgag tctgcagagctggcagggagggagaagctccgaaaggagccggcagctgcctgtgggatc gtgagatccctgagtgtcagaaacacagttgatttctcagatggacgatcccttaaacca gaacagctggtaaggcccagcctccggaagactgaagatctctacttcagtagctctcca atcaaattcacccctggcacgcaggggaaggcccggtccgtgaaagaaaagatccaagca actgtgacccagcgacaatccagggactgcaacccctacgccaccttacctcgtgccagc agcgtgatttccacggcagagggaaccacccggaggacaagcatccatgattttttgtct aaggacagtaggccgcccgtgtccgtggatgcagccccggccccggctgacaggagtgct ccgcccacctccaatgtggaagctatcccagaaagcagaaattcaaaaagcaggtctagg gagcaacaaagctcctaa

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