Taeniopygia guttata (zebra finch): 100220929
Help
Entry
100220929 CDS
T01082
Symbol
SMG7
Name
(RefSeq) protein SMG7 isoform X1
KO
K14409
protein SMG7
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100220929 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgu03019
]
100220929 (SMG7)
Messenger RNA biogenesis [BR:
tgu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
100220929 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
100220929 (SMG7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
100220929
NCBI-ProteinID:
XP_030135306
Ensembl:
ENSTGUG00000003928
UniProt:
A0A674GQD3
LinkDB
All DBs
Position
8:23593198..23642241
Genome browser
AA seq
1192 aa
AA seq
DB search
MSLLCAQYLRQAEVLKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDL
WNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCR
VKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQ
LVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEV
KTRWSVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQFKRLLFQKAFNSQQLVHITVI
NLFQLHHLRDFSNETEQHSYSQDEQLCWTQLLALFMSFLGVLCKCPLQNDYQEDSGAAYP
LPAVKVSMDWLKLRPSVFQEAVVDERRYIWPWLISLLNSFQPHEEDLSSNNATPLPEEFE
LQGFLALRPSFRNLDFSKGHQAITGDKEGQQRRIRQQRLIFTGKWIADNQPRLIQCENEV
GKLLFVTEIPELLLEDPSEAKESLALQEMSMAEPVCADGSPGLKSVLSSGRSLSNSCDAG
EKPMVTFKENIKPREMNREQGRIYPPKDIARERRDFSKGIVANKNDGKKDNNKRKTETKK
CGLDKMQEAGKQNVAVQVKSQTEMRKTPVSEARKTPVTQTPSQASSSQFIPIHHPGAFPP
LPSRPGFPPPTYVVPPPVAFSMGTGYTFPGGVSVPGTFLQPTAHSPAGNQVQGGKQSHIP
YSQQRPSGPGPMTQGPQQTPPPSQQPLSSLPAQATAQSASQLQVQALAQQQQQQSPTKAV
QGLGKSPPHHSGFQQYPQTDSSKQLWNPPQVQGSLGKIMSVKQPYYLQAQDPLKLFEQSL
QPPVMQQQPLEKKMKPFPMEPYNQNPSEVKVPEYYWDSSYGMTDNRVMTQQSNMDRRGKR
QGVFRSEQDAVSRMTFEDPKSSPLLPPDLLKSLAALEEEEELIFSNPPDLYPALLGPLAS
LPGRSLFKSLLEKPSELMSQSSSFLSLSGFSLNQERYPNNSMFNEVYGKNINTSTKTEVT
PSVAHQETSLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSVPFS
NFGPIGTPDNRDRRVADRWKTDKPAMGGFGLDYLPTTSSSSESSWHQSSAPSGTWAVQGP
PAMEDSSAVLMESLKSIWSSSMMHPGPSALEQLLMQQKQKQQRGQGAMNPPH
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctgtgcgcgcagtatctccggcaggcagaagtcctgaaggctgacatgaca
gattcaaagctgggtccagcagaagtctggacatccagacaggctctacaggacttatat
caaaaaatgctagtgactgatttggaatacgctttagataaaaaagtggagcaggacctt
tggaatcatgcctttaaaaatcagatcacaacactccagggtcaggcgaaaaacagagca
aatccgaatcggagcgaagttcaggcgaacctttctctgtttttagaggcagctagtggc
ttctacacacagttactacaggaattgtgcacagtttttaatgtagacctgccttgccgt
gtgaagtcttcccagctggggatcattagcaataaacagacgcacaccagcgccattgtg
aagccgcagtccagctcctgctcctacatctgccagcactgccttgtccacctgggagat
attgctcgctataggaatcagaccagccaggccgagtcttattatagacatgcagctcag
cttgtcccttctaatggtcagccttataatcagttggctatcctagcttcctccaaagga
gaccacttgaccacaattttctactactgcagaagcattgctgtgaagtttcctttccca
gctgcctccactaacctacaaaaagcactttctaaagcactggaaagtcgtgatgaggtg
aagactcgatggagcgtgtctgacttcatcaaggcatttattaaatttcatggccatgtg
tacctgagtaagagcttggagaagctgagccctcttcgagaaaagctggaagaacagttc
aagaggttgttgttccagaaggccttcaactctcagcagttagtccatattactgtgatc
aacctgttccagctgcaccacctgcgagacttcagcaacgaaacagagcagcacagctac
agccaggatgagcagctatgctggacacagctcctggctctcttcatgtcatttcttgga
gttctgtgcaagtgtcctttacaaaatgactaccaggaggactctggggctgcatatcct
cttccagctgtgaaggtttcgatggactggctgaaacttaggcccagtgttttccaggag
gcagtggttgatgagagacggtacatatggccctggctgatctctcttctaaatagtttc
cagcctcatgaagaagatctatccagtaataacgcaaccccccttccagaagagtttgaa
ttgcaaggattcctggctctgaggccctcgttcaggaacttggatttttccaaaggccac
caggcaattacaggggataaagaagggcagcagcgtcggatacggcagcagcgcctgatc
ttcacaggcaaatggattgctgataaccagccaaggttgattcaatgtgaaaacgaggta
ggaaagctcttgtttgtgacagaaatcccggagctcttactggaggaccctagtgaagcc
aaagagagtctcgccttgcaggagatgtccatggcagagccagtgtgtgctgatgggagc
cctggactcaaatcagtgctgtcctctggcagaagcctgagcaacagctgtgatgcaggg
gaaaaacccatggtcaccttcaaggagaatatcaagcctcgggagatgaacagagaacaa
gggcgcatctaccccccaaaggacatagcgagggagagacgggactttagcaaaggaata
gtagcaaataagaatgatgggaagaaggataacaataaaaggaagactgagaccaagaaa
tgtggcttggataagatgcaggaagcaggaaagcagaatgtggcagttcaggtgaaatcc
cagacagagatgaggaagactccagtatctgaagccaggaaaacacctgtaactcagact
ccaagccaggccagcagttcccagttcatccctattcatcacccaggagccttccctccc
cttcctagccggccaggatttcctcctccaacctatgttgtcccccctcctgtggctttc
tccatgggcacggggtacaccttcccaggtggtgtttctgtcccaggaaccttcctccag
cccacagctcactcgcctgcaggaaaccaggtgcaaggtgggaaacagtcccacattcct
tacagccagcaacggccctctggaccagggccaatgacccagggacctcagcaaacacca
cctccttcccagcaacccctctcatctttaccagctcaggcaacagcacagtcagcaagc
cagttacaggtccaagctctggcccagcagcagcagcagcagtcccccacgaaagctgtg
cagggcctggggaagagcccaccacaccactctggattccagcagtatccacagacagac
tcgtcgaagcagctctggaacccccctcaagtccaaggctccctggggaagatcatgtct
gtaaagcagccctattacctgcaggcccaggaccctctcaaactctttgaacagtcatta
cagcctcctgtgatgcaacagcaacctctggagaaaaaaatgaagcctttcccaatggag
ccatataaccagaacccctcagaagtcaaggtgccagaatattactgggactcttcctac
ggcatgacggacaacagggtgatgacccagcagtcgaacatggaccgcagggggaagcgg
cagggagtcttccgctccgagcaggatgctgtctccaggatgacctttgaggaccccaag
agctcccctctgcttcctccggacctgttaaagagtctggctgccttggaggaggaggaa
gagctgattttctctaatcctcctgatctttacccagctctgctggggcctctcgcctct
cttcctggacgaagcctctttaagtccctgctggaaaaaccatcagaattgatgtctcag
tcatcatctttcctgtccctcagtggcttttctctaaatcaggaaagatatccgaacaat
agcatgttcaatgaggtatatggaaaaaacatcaataccagcacaaaaacagaagtcacc
ccttcagttgcccatcaggagacttcactctattctctctttgaagggactccgtggtct
ccatcccttccagccagctcagatcattcaacaccagccagccagtctcctcactcctcc
aaccccagcagcttgccaagctcccctccaacccataaccacaattctgttcctttctcc
aactttggacccattgggactccagacaacagagaccggagagttgcagaccgctggaaa
acagataagccagcaatgggagggtttggtctagactacctcccaacaacgtcatcctct
tcggagagcagctggcaccagtccagtgctcccagtggtacctgggcagtccaaggccct
cctgccatggaggactcctcagctgtgcttatggagagcctgaagtccatctggtccagt
tccatgatgcaccccggcccctcggccctggagcagctgttgatgcagcagaagcagaag
cagcagcgtggacaaggtgccatgaatccgccacattga
DBGET
integrated database retrieval system
