Entry |
|
Symbol |
EXOSC5
|
Name |
(RefSeq) exosome complex component RRP46
|
KO |
K12590 | exosome complex component RRP46 |
|
Organism |
tgu Taeniopygia guttata (zebra finch)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:tgu00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100221009 (EXOSC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:tgu03019]
100221009 (EXOSC5)
Messenger RNA biogenesis [BR:tgu03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
100221009 (EXOSC5)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Z:78473633..78476428
|
AA seq |
224 aa
MAAEVAEAEAADGRCRLRRFSCELGLLSRPDGSAAFLQGDTSVLAGLYGPAEAKISKELP
DRAALDVLLRPKVGLPGVLERSREQLLQQTCEAVVLGVLHPRTAISLVLQVLSDAGSLLS
CCLNAACMALLDAGLPLSALFCGVTCALQPDGAILLDPTARQEQEARAVLTFAIASADRK
VLMVTTKGSCSVQEMQQCLAAAQRAADTIFQFYRDSVRRRYSKC |
NT seq |
675 nt +upstreamnt +downstreamnt
atggcggcggaggtggctgaggcggaggcggcggacgggcggtgtcggctacggcgcttc
tcctgcgagctggggctgctctcgcggcccgacggctcggccgccttcctgcagggggac
acctcggtgctggcggggctgtacggccccgcggaggccaagatcagcaaggagctgccg
gaccgggcggcgctggacgtgctgctgcgccccaaggtggggctgccaggcgtgctggag
cgcagccgggagcagctgctgcagcagacgtgcgaggccgtggtgctgggcgtgctgcac
ccgcgcaccgccatctccctggtgctgcaggtgctcagcgacgccggctctctgctctcc
tgctgcctgaacgccgcctgcatggcgctgctggacgccggcctgcccctctccgccctc
ttctgcggcgtcacctgcgccctgcagcccgacggcgccatcctgctggaccccacggcc
cggcaggagcaggaggcacgcgccgtcctcaccttcgccatcgccagcgccgacaggaag
gtgctgatggtcaccaccaagggcagctgctccgtgcaggagatgcagcagtgcctggcc
gcagcccagcgcgccgccgacaccatcttccagttctaccgcgactctgtgcgccgccgc
tactccaagtgctga |